mRNA_E-fasciculatus_F_contig10708.564.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10708.564.1
Unique NamemRNA_E-fasciculatus_F_contig10708.564.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig10708.564.1 vs. uniprot
Match: A0A6H5KZW9_9PHAE (XRN_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE)

HSP 1 Score: 682 bits (1761), Expect = 1.960e-240
Identity = 342/369 (92.68%), Postives = 352/369 (95.39%), Query Frame = 1
Query:    4 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVIFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKNMPEPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGFPLALPSDNFLVDGDRKSICWEFLHDLLADMIPSIVAEPEGYVAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEDSESSGRKKKWKSITWVRGKEYTYQFLHVGKRKTVMHLAAEKLLEELLPGTY 1110
            QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSV+FAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFM+DVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLK+MP+PDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHR        DNFL+DGD+KSICWEFL DLLADMIPSIVAE EGY+AVSLEQMDLNNRYPPAGSVFKMAVQQG+LGDGVEIEVHDLSDE S SSG  KKWKS+TWVRGKEYTY FLHVGK+KTVMHLAAEKLLEELLP  Y
Sbjct:   55 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMDDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHR--------DNFLIDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGKLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLY 415          
BLAST of mRNA_E-fasciculatus_F_contig10708.564.1 vs. uniprot
Match: L1JQ07_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ07_GUITC)

HSP 1 Score: 232 bits (591), Expect = 2.700e-71
Identity = 122/240 (50.83%), Postives = 163/240 (67.92%), Query Frame = 1
Query:    7 ILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVIFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKNM--PEPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLS-------------SIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALK 678
            +LH A RKA+D +HAI R++++++ TL+   P KSV+ AFDG  PLAKLL QR RR  S + SKY++S LH++PGTKFM+ +  A EYYA         ++ V FYISGA+V GEGE+K I+W+ N+   + DE  +IVGGDADL+LQGLA+  VK+ F+ +  D   +  S             S+WEVVRSLE +FPGQS  VR DL VL+++NGNDYLPKVRG SF   F+AY+ +K
Sbjct:    4 LLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRNKSSKASKYKLSGLHITPGTKFMQTMREACEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWIHNLLQNQNDEKIIIVGGDADLVLQGLAVLRVKDLFVYAGKDMSQHPSSRKAKGKSSPSIVLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVK 243          
BLAST of mRNA_E-fasciculatus_F_contig10708.564.1 vs. uniprot
Match: M1US37_CYAM1 (XRN_N domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1US37_CYAM1)

HSP 1 Score: 200 bits (508), Expect = 1.560e-54
Identity = 114/296 (38.51%), Postives = 172/296 (58.11%), Query Frame = 1
Query:    4 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVIFAFDGSAPLAKLLVQRSRR--------ENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYQGVKFYISGANVPGEGELKCIDWLKNMPEPDESAVIVGGDADLILQGLALSEVKNTFI-----------------CSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALK--RGKHRGFPLALPSDNFLVDGDRKSICWEFLHDLLADMIPSIV 804
            Q++H+A R AR+ D    R+FR ++  L+ C P+KSV  AFDG APLAKL+ Q+ RR           KR  +  +  L LSPGT+ M+    A+E+Y     +  R  YQ V+F +SG  VPGEGE+K ID++    +P  S V++G DADL++ GLA  +V+N F+                   +  A S  + S+W+ +R L+  FPG++  +R+DL V++M+ GNDYLPK+RG SF+  ++AY+ALK  +G  RG         +LV  +++S  WEFL+ L+  +I  +V
Sbjct:   39 QLIHLAARVARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRTRKRKRRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRYVDPQHSVVVIGSDADLVVLGLATQKVRNFFVFVITPRANMQDAPEHGTAQKRQAISAIVISVWQWIRVLDRFFPGETPSLRLDLVVMLMMQGNDYLPKLRGTSFNSIWEAYKALKLDKGPMRG--------KYLVCREQRSFDWEFLYALMKRLINPLV 326          
BLAST of mRNA_E-fasciculatus_F_contig10708.564.1 vs. uniprot
Match: A0A7S1TFG2_9RHOD (Hypothetical protein n=4 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFG2_9RHOD)

HSP 1 Score: 199 bits (506), Expect = 1.810e-54
Identity = 116/306 (37.91%), Postives = 181/306 (59.15%), Query Frame = 1
Query:    4 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVIFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHL-----SPGTKFMEDVASAMEYYAFQECTR----PCYQGVKFYISGANVPGEGELKCIDWLKNMPEP-----------DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGFPLALPSDNFLVDGDRKSICWEFLHDLLADMIPSIVAEPEGYVAVSLEQMDLNNR 861
            Q++H+A+RK+ +E+  + R+FR+++  LK+C P++SV FAFDG  P+AKLL QR RR N   + +  ++  H+     +PGT+ M  +  A++Y+A   C+R      Y  V   ISG +VPGEGE+K  DWL +                ES +++GGDAD++LQGLA +  ++ F+ +Q+      + SI  +V++LE  FPG+S  VR+D  VL ++NGNDYLPKVRGV F   +  Y A+K+G+ +          +L+D  R++  W FL  LL + I S+V EP   +A    Q++  +R
Sbjct:   31 QVIHMALRKSPNEEKLVIRLFRNIDAALKQCIPKRSVYFAFDGPGPMAKLLTQRVRRSNPANSQRKVLANRHIDPNAITPGTELMYMLQDALDYFA---CSRLEGDMKYDKVDMRISGPDVPGEGEVKIFDWLNSFVARREAGTQVSSIVTESVIVIGGDADIVLQGLATTSFRDLFVYAQSRRDEGTVISISLLVKALEDNFPGESDRVRLDFIVLCLMNGNDYLPKVRGVGFDSLWNGYIAIKKGREQF------QGQYLLDSTRRTFNWPFLVALL-ETIRSVVIEPHVLLAEKSLQVEEPSR 326          
BLAST of mRNA_E-fasciculatus_F_contig10708.564.1 vs. uniprot
Match: A0A2V3J5K0_9FLOR (5'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K0_9FLOR)

HSP 1 Score: 193 bits (490), Expect = 6.020e-52
Identity = 120/299 (40.13%), Postives = 171/299 (57.19%), Query Frame = 1
Query:    4 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVIFAFDGSAPLAKLLVQRSRRENSKRNSKY-------------------RMSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKNMPEPD-ESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYR-----LSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGFPLALPSDNFLVDGDRKSICWEFLHDLLADM-IP-SIVAEPE 816
            QILH A+RKA +       IFR+++  LK C PRKSV FAFDG APLAKL  QR RR   +  S+Y                    +  L ++PG + +  V  ++EY+A+        Y+ V+  ISGA+VPGEGELK ID+ +    P  +S V+VGGDAD++LQGLA   V+N F+  +  AGS       + S+WE+ R  E +FP +S+ VR+D  +L +LNGNDY+PKVRG+S SR +  Y  LK     G P      + LVD +++++ W   + L+  + +P S +AE E
Sbjct:   39 QILHQAVRKATNRQTLAAAIFRELDQILKNCIPRKSVFFAFDGPAPLAKLATQRRRRRQRRGASEYVSDYIDENGVSRKAKTVQPAIDGLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLIDFCRTAQIPSTDSVVVVGGDADIVLQGLATVPVRNFFVYLRNFAGSRGRRQSYVISVWELTRIFERLFPNESSSVRLDFVLLAILNGNDYIPKVRGISLSRTWHRYLNLKLDSSGGRPGPFRGRS-LVDAEKRTLNWPMFYALMDRVGVPVSSIAEAE 336          
BLAST of mRNA_E-fasciculatus_F_contig10708.564.1 vs. uniprot
Match: A0A7J7IHE6_9RHOD (XRN_N domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHE6_9RHOD)

HSP 1 Score: 189 bits (480), Expect = 1.470e-50
Identity = 109/296 (36.82%), Postives = 177/296 (59.80%), Query Frame = 1
Query:    4 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVIFAFDGSAPLAKLLVQRSRRENSKRNSKYRMS--------ALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYQGVKFYISGANVPGEGELKCIDWLKNMPEPDESAVIVGGDADLILQGLALSEVKNTFI-----------CSQTDAGSYRLS------SIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGFPLALPSDNFLVDGDRKSICWEFLHDLLADMIPSIVAE 810
            Q++H+A R A++ D    R++R ++  L+ C P++SV  AFDG APLAKL+ Q+ RR    R    ++          L LSPGT+ M+    A+E+Y     +  R  Y+ ++F +SG  VPGEGE+K ID++    EP  S +++G DADL+L GLA  ++++ F+            S+  A ++R S      S+W+ +R L+ +FPG++A VR+DLA+L+M+ GNDY+PK+RG SF   + AY+ALK    R  P+   S  +L+ G++++I  EFL+ L++ +   +V +
Sbjct:   39 QLIHLAARVAKNRDQFFIRLYRWLDKVLRLCVPKESVFIAFDGPAPLAKLVTQKRRRVLEARKLTRKLEPKKRCGVDVLSLSPGTELMQMTLQAIEFYVCSRLQSKRNLYRNLRFVVSGPTVPGEGEIKIIDYIHRCVEPHHSVIVIGSDADLVLLGLATQKIRDFFVFVITPRQSAQVASRGPAETHRNSVNATTISVWQWIRVLDRLFPGETAPVRLDLALLLMMQGNDYVPKLRGSSFKSIWAAYKALKM---RQGPM---SGRYLLCGEQRTINLEFLYALMSSLENPLVPQ 328          
BLAST of mRNA_E-fasciculatus_F_contig10708.564.1 vs. uniprot
Match: I2CR78_NANGC (5'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR78_NANGC)

HSP 1 Score: 174 bits (442), Expect = 1.660e-46
Identity = 112/291 (38.49%), Postives = 160/291 (54.98%), Query Frame = 1
Query:    4 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVIFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYQGVKFYISGANVPGEGELKCIDWL-------------------------KNMPEPDESAVIVGGDADLILQGLALSEVK--NTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGFPLALPSDNFLVDGDRKSICWEFLHDLLADM 789
            Q+ H+A RKARDEDHAIRR+ +++  TL+    +KSV+ AFDG APLAK++ QR RR   K ++K  +++LHLSPGT FM   A A+  +     E      + +++Y+S +  PGEGE+K +DW+                         K   +  ES V+VGGDADL+LQGLAL  +   N FI     +G +   S+ + V  LE  FPGQS  VR D+ +L+++ GNDYL KVRG++F     AY  +KR            D F++  + K+  W FL     D+
Sbjct:  101 QLTHMAARKARDEDHAIRRLLKELGRTLRVLRAQKSVVIAFDGPAPLAKIITQRKRRAAEK-DAKTPLNSLHLSPGTSFMRRAAEAVIDFCHTRLESDLTPRRRIRYYVSCSESPGEGEVKLMDWINTYLLTHEDGRXXXXXXXXXXXXXKKAGRKDSESIVVVGGDADLVLQGLALPGLPDFNVFIPDVKRSGYF--VSLRQFVARLETDFPGQSHQVRTDMVLLLVMAGNDYLKKVRGLTFRSKLLAYNNVKRKPEF-------KDQFMLLAENKTFNWPFLQAFYDDL 381          
BLAST of mRNA_E-fasciculatus_F_contig10708.564.1 vs. uniprot
Match: A0A836C8H5_9STRA (DRBM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H5_9STRA)

HSP 1 Score: 178 bits (452), Expect = 5.460e-46
Identity = 160/570 (28.07%), Postives = 216/570 (37.89%), Query Frame = 1
Query:    4 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVIFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQEC------------------------------------------------------------------------------------------------------------------------------TRPCYQG---------------------------VKFYISGANVPGEGELKCIDWLK---NMPEP-----------------------------------DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGFPLALPSD--NFLVDGDRKSICWEFLHDLLADMIPSIVAEPEGYVAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIE--------VHDLSDEDSESSGRKKKWKSITWVRGKEYTYQFLHVGKRKTVMHLAAEKLLEELLPGTY 1110
            QILHVA+R++ +E+ AI R F +++  LK   PR+SV+FAFDGSAPLAKLL QR+RRE  +R  +Y+MSAL+++PGT FM   A AM YYA+                                                                                                                                  RP Y+G                           V +Y+  A+V GEGELK +DW       P                                     +ES VIVGGDADL+LQGLALS+VKN F+ +     S R+ S+W+V R LEAMFPG+S  +R DL  L++LNGNDYLPKVRGVSF RCF+ Y A K         A P    +F++D +R+   W FL   L           +G          +  +    G   K  ++ G+                 +D+  E+ E +G   ++     V G   T    H  + K     AA  +L+EL P  Y
Sbjct:   58 QILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRP-YRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAK---------AAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGAAMALQGPTPAQWVNAAVQKKVIRGGR--KKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDSPRFGVSVAVAGTTLTVPAEHASQ-KDARRAAATLVLQELAPELY 614          
BLAST of mRNA_E-fasciculatus_F_contig10708.564.1 vs. uniprot
Match: A0A7S0E673_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E673_9CRYP)

HSP 1 Score: 163 bits (413), Expect = 1.670e-45
Identity = 81/165 (49.09%), Postives = 116/165 (70.30%), Query Frame = 1
Query:    7 ILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVIFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKNM--PEPDESAVIVGGDADLILQGLALSEVKNTFICSQTD 492
            +LH A R+A+D +HAI +++++++ TL+   P KSV+ AFDG  PLAKLL QR RR  S ++SKY++S LH++PGTKFM  +  A EYYA         ++ V FYISG++V GEGE+K IDW+ N+   + D+  +IVGGDADL+LQGLA+  VK+ F+ +  D
Sbjct:   14 LLHTACRRAKDFEHAILKVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRSKSSKSSKYKLSGLHITPGTKFMHAMKQACEYYAALRLVASAKFRNVAFYISGSDVAGEGEIKIIDWIHNLLHSQNDDRLIIVGGDADLVLQGLAVLRVKDLFVYAGKD 178          
BLAST of mRNA_E-fasciculatus_F_contig10708.564.1 vs. uniprot
Match: A0A7S4KKW8_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KKW8_GUITH)

HSP 1 Score: 145 bits (365), Expect = 4.600e-36
Identity = 87/268 (32.46%), Postives = 143/268 (53.36%), Query Frame = 1
Query:    7 ILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVIFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECT-RPCYQGVKFYISGANVPGEGELKCIDWLKNMPEP--DESAVIVGGDADLILQGLALSEVKNTFICSQTDA-GSYRLS-----SIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALK-RGKHRGFPLALPSDNFLVDGDRKSICWEFLHDLL 780
            +LH   R  ++     +R+FR V+  L+   P KSV+  FDG  P+AK+  Q   RE   + +   + ++ ++PGT+FM +V      +  Q    R  Y+ + FY+S ++V GEGELK ++W+    E    +  + +GGD+DL +Q LAL      ++ ++ D  G  R+      S+ E+ + LE +FP  S ++R DL +LI+ NGNDYLP ++  +    F+ Y  +K + K R          FL+DG  K+  +EFL + L
Sbjct:   56 MLHTCARNCKNSSAVCKRVFRQVDSYLRIFTPGKSVVLCFDGPGPIAKIPKQVESREKRTKVASSTLDSIDITPGTRFMSEVRELCFAHVVQSLEQRGGYRDISFYLSCSDVAGEGELKLVEWIHTFVESASKDRILFIGGDSDLTIQSLALRGHSQVYLLNRKDGVGLQRIKPMHFISLSELKKELETIFPDHSDIIRFDLLLLIIFNGNDYLPPLKHFNLQVSFEVYTLMKSQEKFRS--------RFLLDGREKTFDYEFLAEFL 315          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10708.564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZW9_9PHAE1.960e-24092.68XRN_N domain-containing protein n=2 Tax=Ectocarpus... [more]
L1JQ07_GUITC2.700e-7150.83Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
M1US37_CYAM11.560e-5438.51XRN_N domain-containing protein n=1 Tax=Cyanidiosc... [more]
A0A7S1TFG2_9RHOD1.810e-5437.91Hypothetical protein n=4 Tax=Compsopogon caeruleus... [more]
A0A2V3J5K0_9FLOR6.020e-5240.135'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis cho... [more]
A0A7J7IHE6_9RHOD1.470e-5036.82XRN_N domain-containing protein n=1 Tax=Cyanidioco... [more]
I2CR78_NANGC1.660e-4638.495'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannoch... [more]
A0A836C8H5_9STRA5.460e-4628.07DRBM domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S0E673_9CRYP1.670e-4549.09Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S4KKW8_GUITH4.600e-3632.46Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10708contigE-fasciculatus_F_contig10708:451..4361 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score704.9
Seed ortholog evalue2e-200
Seed eggNOG ortholog2880.D7G8V1
KEGG koko:K12618
KEGG Pathwayko03008,ko03018,map03008,map03018
EggNOG free text desc.5'-3' exoribonuclease activity
EggNOG OGsCOG5049@1,KOG2045@2759
COG Functional cat.ADL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03016,ko03019,ko03036
Hectar predicted targeting categoryother localisation
Exons6
Model size1110
Cds size1110
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10708.564.1prot_E-fasciculatus_F_contig10708.564.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10708 451..4361 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927570.3356175-CDS-E-fasciculatus_F_contig10708:450..6691622927570.3356175-CDS-E-fasciculatus_F_contig10708:450..669Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10708 451..669 -
1695995600.8667998-CDS-E-fasciculatus_F_contig10708:450..6691695995600.8667998-CDS-E-fasciculatus_F_contig10708:450..669Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10708 451..669 -
1622927570.350722-CDS-E-fasciculatus_F_contig10708:1090..12891622927570.350722-CDS-E-fasciculatus_F_contig10708:1090..1289Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10708 1091..1289 -
1695995600.8794012-CDS-E-fasciculatus_F_contig10708:1090..12891695995600.8794012-CDS-E-fasciculatus_F_contig10708:1090..1289Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10708 1091..1289 -
1622927570.3715355-CDS-E-fasciculatus_F_contig10708:1821..20541622927570.3715355-CDS-E-fasciculatus_F_contig10708:1821..2054Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10708 1822..2054 -
1695995600.8889484-CDS-E-fasciculatus_F_contig10708:1821..20541695995600.8889484-CDS-E-fasciculatus_F_contig10708:1821..2054Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10708 1822..2054 -
1622927570.3872488-CDS-E-fasciculatus_F_contig10708:2290..24501622927570.3872488-CDS-E-fasciculatus_F_contig10708:2290..2450Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10708 2291..2450 -
1695995600.89812-CDS-E-fasciculatus_F_contig10708:2290..24501695995600.89812-CDS-E-fasciculatus_F_contig10708:2290..2450Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10708 2291..2450 -
1622927570.3995593-CDS-E-fasciculatus_F_contig10708:3716..38811622927570.3995593-CDS-E-fasciculatus_F_contig10708:3716..3881Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10708 3717..3881 -
1695995600.907032-CDS-E-fasciculatus_F_contig10708:3716..38811695995600.907032-CDS-E-fasciculatus_F_contig10708:3716..3881Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10708 3717..3881 -
1622927570.4160495-CDS-E-fasciculatus_F_contig10708:4227..43611622927570.4160495-CDS-E-fasciculatus_F_contig10708:4227..4361Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10708 4228..4361 -
1695995600.9175608-CDS-E-fasciculatus_F_contig10708:4227..43611695995600.9175608-CDS-E-fasciculatus_F_contig10708:4227..4361Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10708 4228..4361 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10708.564.1

>prot_E-fasciculatus_F_contig10708.564.1 ID=prot_E-fasciculatus_F_contig10708.564.1|Name=mRNA_E-fasciculatus_F_contig10708.564.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=370bp
MQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVIFAFDGSAPLAK
LLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPC
YQGVKFYISGANVPGEGELKCIDWLKNMPEPDESAVIVGGDADLILQGLA
LSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIM
LNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGFPLALPSDNFLVDGDRKS
ICWEFLHDLLADMIPSIVAEPEGYVAVSLEQMDLNNRYPPAGSVFKMAVQ
QGRLGDGVEIEVHDLSDEDSESSGRKKKWKSITWVRGKEYTYQFLHVGKR
KTVMHLAAEKLLEELLPGTY
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mRNA from alignment at E-fasciculatus_F_contig10708:451..4361-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10708.564.1 ID=mRNA_E-fasciculatus_F_contig10708.564.1|Name=mRNA_E-fasciculatus_F_contig10708.564.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3911bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10708:451..4361- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAGATCCTGCACGTGGCGATGCGGAAAGCAAGAGACGAAGACCACGC CATCCGCCGCATCTTTAGGGATGTCAACCTCACGCTCAAGCGTTGTCCGC CTCGAAAGAGCGTTATCTTCGCGTTTGACGGAAGGTATGGTACAGACTTT CTTGCCGAATTTTGGAGCAGTCGGCGATTGTCAATTTTGTTCCCAATGGT CCACGAATGCTGGTCATCTTCTAACCTGTATCAGAGAATTAGCCGCACAT GATCGAGCAAAATGCGACAGGAATGCTGCTGCTCCTGCGTGTAGGCATAG AGCATGCTAACGGGGGTTGGTTTGTTGGCCCATCCACGACCTGGAACAAC GGGGCAGTCAAGCGAGCAACCGCAAAAGTATTGAAACCATGCTTGAAATC ATGCATGTATCTCAGATATCTCTCTCGCTCTGGGTTTGCCCTTTCGCCGT CGTCCCCCGGTCGTCGCACCAACTACGCAGTGCACCGCTAGCGAAGCTGC TTGTCCAGCGAAGCCGGCGGGAAAACTCCAAACGCAACTCGAAATATCGG ATGAGCGCCCTCCACCTCTCCCCGGGAACCAAGTTCATGGAAGACGTGGC GTCTGCGATGGAGTACTATGCTTTTCAGGAGTGCACGCGACCGTGGTGAG AAACATACGACAGAGGGAAACGGGGATGCCGCGATTCTGCATCAAATGTA TGCTACTATTGACATAGTTTGTACCTTTGTACCAAGCTATGTGCCAAAAA CGTCCTTGCGTCTGACGCCGCTCTACTTGGCGAAGCACTCAAAAAAAAAC TGACTTTTATACCGTTGCCGCCAAGCGCGCGGTGAATATTGAGCCGCTAT TCATATTTTCTTCATCCGTGAACTTTCGCTCCCAGCCAGCTTCTATCTAC CCGAAGGCGTCACGGCAAATACCGCTAAATGCCAGCCAAACTGGCGGACG TGTTTGTATACCCAGGGCAGCTCGTGCTTGCCTCGCGACAAGTAGAGGAT CCGCTTGATCCCACCTCCGATTTTTTCGGGAATTGTCGAGATCAATCAGG ATTTGCAACTATCCGAGGCGGGGGGTGTACTCATAATCGTGCATGCCGTA GTCGTTAGACCATTGACCTCGCGTCCCTACATAGCCGGGACGGAGCACGC CGGATTCTCACCAGACCAGGCTCTCACATCACCAAGCGCGAAGCGCCGTG AGGTGTTCGGAGAGTCGCATGAAGGGTGCGCTGCATCCTGCTAAGGGTGT TCGACATCGTGTGCTTACTTCCTTGCATAGGGATGACAGCTGCAGATGAC TTATTTTGTTTTCTGGTGCTTTCACCTCCAGAGACAGTTATAAGCACTGT GTACCTGCTCGACCCATTTAATACAACGTGGTGCGATCATGCCCTTTGCG CGGAGAGAGGGTTCTCGACGCCGCACAAGATGACCTTTACTCGACCACCA TTATGGGCACCGCAAAAAAAAATCAAGGGCAAAAAAAAAAGCGGTAACGT GGTTGCCGAGCTCCAAGAAGTGATCGACTTGTTATACAACATCGCTGCCA TGCGACGAAAACCCAACCCCGATGGCAAACACCGGAAGGGGGTTGCTTGT TTTGCAACGTCGTTGCCAAGCGACGAAAACCTAACCCCGATGGCAAACAC CGGGGAAGGGGGGAAGGGGGGGGATTTATGTGATTTTCAGGTACCCTTGG CGGTTGCGGAAGATTCTACCATGTACTTCGTGAATAGAATGGCGAATTTA ACTCTTAGACTACCATGAGGAGAATGACTCGCTGCTGTCTCATACTTGAA CGTTTGGAGTTATTGAAACACAAACGCGAGTGCTAAGAATTCACGCGTCG AGTCTGTCCTTTATGCACTACTGTTGCAATCGTCATTGTGTGATGTCCCC CCTCGCTGCAGCTATCAAGGTGTGAAGTTTTACATTTCTGGGGCGAACGT GCCGGGCGAAGGGGAGCTCAAGTGCATTGATTGGTTGAAGAACATGCCCG AGCCAGACGAGAGTGCGGTGATTGTAGGTGGCGATGCCGATTTGATTCTC CAGGGACTCGCTCTCAGTGAGGTTAGTGCGAAAATACCAGTCATGCGATG TTGCTCTCAACTCTGTTCCAAGGGTAGTCTTGCAGTTCTCCTTAATGGCG AATGACGATTGGATTTGAGCGTTAGGACAAAATGATGGAATGTTGCTTCT CCTACCCTTTCACGGCCAACTTCTGTGTTCTCAAGTATGCCCGAAAAAAT CGAAATTATTGTTTCCCCCCGCATTCTGCCTTCCGACTCTGCTACCTGCA CGGCCAGGTGAAGAACACGTTCATCTGTTCACAGACAGACGCCGGTTCAT ATCGCCTATCGTCCATTTGGGAGGTGGTCCGCTCGCTGGAAGCAATGTTC CCTGGACAGTCGGCGTTGGTGCGTATTGATCTGGCCGTTCTGATCATGCT CAACGGCAACGACTACCTCCCGAAGGTCAGGGGGGTCTCCTTCAGTCGCT GTTTCCAGGCGTACCAAGCGCTCAAAAGGGGGAAGCACCGGTGAGCCCAT GCCGTGCCGCGTTTGAAAGTATCCTGCTCATGGTGGGGCAGTTCTTGTCG CAGTCGAATCGCCAAGTCGCCACAGTAGCACGCCGCAGAGTCACTTTTGT CGCCTCTGGTGGCACTTATCTGGCCTGTGCATACAGGAGGCACACCTGTG TTGACAGCGCGACAGTACATCTGAAATCGTGCAGCACATCCGTGTTTGAG TGGTCAGCACGACCCATTTTCATGTGGAGCCGATCTGTATCCGCTGATGA ATTTGGCAGGCTAATATGGATCGGGGCCAGCTTTCGTAGGGGGGGATGCT CATTGTGAAAAGCGTGTTTTTTTCGCCACCACATAGTGTTGCTTTTCGGC CCACTCGTAGCCCTCCTTCATTCCACTCAGAACGCCCATTGGTCCACATA CATAGGTAGAATGTGACCTTAAGTGGTGCCGTGACATGACCTATTCGGTG GCTTTCAACATCCCGCATTGGTATCGTAGCCGCCGGCTTTGGTGTGAGAG CTGACGTCATTTCATCTAACAGGGGTTTTCCTCTTGCCTTGCCCAGTGAT AACTTCTTGGTCGACGGGGACAGGAAGAGCATATGCTGGGAATTTCTGCA CGACCTGTTGGCTGACATGATACCGAGCATCGTCGCAGAGCCGGAAGGTT ACGTTGCCGTCAGTCTTGAACAAATGGATCTGAACAATCGCTATCCACCT GCTGGATCGGTGTTCAAAATGGTGAGCACGTTGGTGACGTCTCGGGAACG TCGGCATTTGTATCACGATGTCTTGTAATTCTTCTTTTGTTTCTCTAGTG TCACCTTCGGTGGAACAAGCGTGGCCGGCAGAATAGGTCCGTGGCTTGCG CTGCTGCCGATCGTATATCAAGTCATTCAGCAATGAGCTGTGTGCACACA ATCCGTCGAGTTTCGAAATATCTTTGACCTCCAGACAAGTACAGCTGCTC TCAAAGTAACAAGGGTAATTTGCAAGATTTATCACATACACAAATAAAGG TCTTGTCCAGATCACTCTTTCGTACTTGAAAACAATATGTTTTGCGTAGT TGTCCCGATAGTTTCATCGTTCGTTGTGAAATTGACCTCAGCGTATGCCC GCCTCGCTCTATTGGTCCGGTCATTCCGCTCTACTGCGATAGGCAGTGCA GCAAGGCAGACTTGGGGATGGCGTGGAAATCGAAGTGCACGACTTGTCAG ACGAAGATTCCGAATCGTCAGGTCGCAAAAAGAAGTGGAAATCCATCACT TGGGTGCGGGGGAAAGAGTACACCTATCAGTTCTTGCATGTCGGGAAAAG AAAGACTGTGATGCACTTGGCGGCGGAAAAACTGCTGGAGGAACTGTTGC CAGGTACGTAC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10708:451..4361-

>mRNA_E-fasciculatus_F_contig10708.564.1 ID=mRNA_E-fasciculatus_F_contig10708.564.1|Name=mRNA_E-fasciculatus_F_contig10708.564.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2220bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10708:451..4361- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAGATCCTGCACGTGGCGATGCGGAAAGCAAGAGACGAAGACCACGC
CATCCGCCGCATCTTTAGGGATGTCAACCTCACGCTCAAGCGTTGTCCGC
CTCGAAAGAGCGTTATCTTCGCGTTTGACGGAAGATGCAGATCCTGCACG
TGGCGATGCGGAAAGCAAGAGACGAAGACCACGCCATCCGCCGCATCTTT
AGGGATGTCAACCTCACGCTCAAGCGTTGTCCGCCTCGAAAGAGCGTTAT
CTTCGCGTTTGACGGAAGTGCACCGCTAGCGAAGCTGCTTGTCCAGCGAA
GCCGGCGGGAAAACTCCAAACGCAACTCGAAATATCGGATGAGCGCCCTC
CACCTCTCCCCGGGAACCAAGTTCATGGAAGACGTGGCGTCTGCGATGGA
GTACTATGCTTTTCAGGAGTGCACGCGACCGTGTGCACCGCTAGCGAAGC
TGCTTGTCCAGCGAAGCCGGCGGGAAAACTCCAAACGCAACTCGAAATAT
CGGATGAGCGCCCTCCACCTCTCCCCGGGAACCAAGTTCATGGAAGACGT
GGCGTCTGCGATGGAGTACTATGCTTTTCAGGAGTGCACGCGACCGTGCT
ATCAAGGTGTGAAGTTTTACATTTCTGGGGCGAACGTGCCGGGCGAAGGG
GAGCTCAAGTGCATTGATTGGTTGAAGAACATGCCCGAGCCAGACGAGAG
TGCGGTGATTGTAGGTGGCGATGCCGATTTGATTCTCCAGGGACTCGCTC
TCAGTGAGCTATCAAGGTGTGAAGTTTTACATTTCTGGGGCGAACGTGCC
GGGCGAAGGGGAGCTCAAGTGCATTGATTGGTTGAAGAACATGCCCGAGC
CAGACGAGAGTGCGGTGATTGTAGGTGGCGATGCCGATTTGATTCTCCAG
GGACTCGCTCTCAGTGAGGTGAAGAACACGTTCATCTGTTCACAGACAGA
CGCCGGTTCATATCGCCTATCGTCCATTTGGGAGGTGGTCCGCTCGCTGG
AAGCAATGTTCCCTGGACAGTCGGCGTTGGTGCGTATTGATCTGGCCGTT
CTGATCATGCTCAACGGCAACGACTACCTCCCGAAGGTCAGGGGGGTCTC
CTTCAGTCGCTGTTTCCAGGCGTACCAAGCGCTCAAAAGGGGGAAGCACC
GGTGAAGAACACGTTCATCTGTTCACAGACAGACGCCGGTTCATATCGCC
TATCGTCCATTTGGGAGGTGGTCCGCTCGCTGGAAGCAATGTTCCCTGGA
CAGTCGGCGTTGGTGCGTATTGATCTGGCCGTTCTGATCATGCTCAACGG
CAACGACTACCTCCCGAAGGTCAGGGGGGTCTCCTTCAGTCGCTGTTTCC
AGGCGTACCAAGCGCTCAAAAGGGGGAAGCACCGGGGTTTTCCTCTTGCC
TTGCCCAGTGATAACTTCTTGGTCGACGGGGACAGGAAGAGCATATGCTG
GGAATTTCTGCACGACCTGTTGGCTGACATGATACCGAGCATCGTCGCAG
AGCCGGAAGGTTACGTTGCCGTCAGTCTTGAACAAATGGATCTGAACAAT
CGCTATCCACCTGCTGGATCGGTGTTCAAAATGGGGTTTTCCTCTTGCCT
TGCCCAGTGATAACTTCTTGGTCGACGGGGACAGGAAGAGCATATGCTGG
GAATTTCTGCACGACCTGTTGGCTGACATGATACCGAGCATCGTCGCAGA
GCCGGAAGGTTACGTTGCCGTCAGTCTTGAACAAATGGATCTGAACAATC
GCTATCCACCTGCTGGATCGGTGTTCAAAATGGCAGTGCAGCAAGGCAGA
CTTGGGGATGGCGTGGAAATCGAAGTGCACGACTTGTCAGACGAAGATTC
CGAATCGTCAGGTCGCAAAAAGAAGTGGAAATCCATCACTTGGGTGCGGG
GGAAAGAGTACACCTATCAGTTCTTGCATGTCGGGAAAAGAAAGACTGTG
ATGCACTTGGCGGCGGAAAAACTGCTGGAGGAACTGTTGCCAGGTACGTA
CGCAGTGCAGCAAGGCAGACTTGGGGATGGCGTGGAAATCGAAGTGCACG
ACTTGTCAGACGAAGATTCCGAATCGTCAGGTCGCAAAAAGAAGTGGAAA
TCCATCACTTGGGTGCGGGGGAAAGAGTACACCTATCAGTTCTTGCATGT
CGGGAAAAGAAAGACTGTGATGCACTTGGCGGCGGAAAAACTGCTGGAGG
AACTGTTGCCAGGTACGTAC
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