mRNA_E-fasciculatus_F_contig10647.513.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10647.513.1
Unique NamemRNA_E-fasciculatus_F_contig10647.513.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A6H5KZP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP2_9PHAE)

HSP 1 Score: 459 bits (1180), Expect = 1.350e-156
Identity = 225/313 (71.88%), Postives = 247/313 (78.91%), Query Frame = 1
Query:    7 VSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFKEDGEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVK-------------PSVVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWERDSMIVCPICREES 906
            + V+TL GKT+ LVVGS+NTI D+KQ +QD EGIPPD+QR IF G QLEDG T+  YNIQ  STLHLVLR+ GGG   P    IAV AKF DVSDSSGLTEHAFSDH P WR+A+PGLCLEGRCTNSDCDA G MVILNHG +DFDL+R GRDP+ CPMC+ +VVPSTC FTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRF   GE VEWDRLLIQ RPLLKLEQRV SAPPA +RV+               V+DHTWGRC      SAF  T ASDETVL+CGHRFHT+CL GWE+ SMIVCPICREES
Sbjct:  272 IFVKTLTGKTVKLVVGSYNTIADIKQMMQDMEGIPPDQQRLIFAGVQLEDGLTISFYNIQGNSTLHLVLRLRGGGFAAPP---IAVGAKFVDVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNSDCDAHGRMVILNHGLRDFDLIRPGRDPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFDGRGE-VEWDRLLIQARPLLKLEQRVPSAPPADERVERPNTTAISATSTVADVIDHTWGRCXXXXXXSAFGATSASDETVLDCGHRFHTRCLTGWEQGSMIVCPICREES 580          
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: D7G3U0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U0_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 1.900e-102
Identity = 147/199 (73.87%), Postives = 162/199 (81.41%), Query Frame = 1
Query:  352 PGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFKEDGEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRV-KPS------------VVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWERDSMIVCPICREESS 909
            P LCLEGRCTN  CDA G MVILNH F+DFDL+R GRDP+ CPMC+ +VVPSTC FTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRF+E GE V+WDRLLIQVRPLLKLEQRV SAPPA +R+ +P+            V+DHTW RCT     SAF  T ASDETVL+CGHRFHT+CLAGWE+ SMIVCPICREESS
Sbjct:   18 PRLCLEGRCTNRQCDAHGRMVILNHAFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFEEGGE-VQWDRLLIQVRPLLKLEQRVPSAPPADERMERPNTTANTATSTVAVVIDHTWSRCTXXXXXSAFGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICREESS 215          
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A225VQY5_9STRA (Ubiquitin family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQY5_9STRA)

HSP 1 Score: 248 bits (634), Expect = 5.410e-77
Identity = 133/305 (43.61%), Postives = 176/305 (57.70%), Query Frame = 1
Query:    7 VSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEA-GDSYHRFKEDGEE--VEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWER-----DSMIVCPICR 897
            + ++TL GKT+ +   S ++ID+VKQ+IQD++G PPD+QR IF G+ LEDGRT+GDY I  GS++  VLR+ GGGG          S  FADVSD+S L EH FS + P WR    GL +EGRC N  C A G M+I  + F  F+LMR  R    CPMC   V P TCGF DC W++ G ++ +   +   WK+A G+ YHRF  D +   VEWD LLI V+P  +     + A PA  +V  S  D      T C  C +  ET+A +     C H FHT C+  W +     DS+  CP+CR
Sbjct:   75 IYIKTLTGKTLKIHCTSTDSIDNVKQKIQDQDGTPPDQQRLIFAGKHLEDGRTLGDYGIFHGSSVCQVLRLRGGGGP-------LTSMYFADVSDNSILREHTFSTNAPQWRSCGKGLNIEGRCENRGCPAFGKMIIYPNRFNPFNLMRGDRAH--CPMCGDDVKPLTCGFYDCVWKFDGIRSSDGFSISSPWKDASGEKYHRFDADEKHGSVEWDSLLIMVKPRGEAASAKIIASPAIHQVNASTSDSEQESETICPICWSIAETVAGETITTHCEHTFHTSCIQEWAQWCSRHDSLPSCPVCR 370          
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: S4W648_9VIRU (Ubiquitin n=1 Tax=Pandoravirus salinus TaxID=1349410 RepID=S4W648_9VIRU)

HSP 1 Score: 226 bits (577), Expect = 7.760e-66
Identity = 123/302 (40.73%), Postives = 166/302 (54.97%), Query Frame = 1
Query:   13 VRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFKED-GEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWERDSMIVCPICREESSSP 915
            V+TL GK I +     N+I+++K  I DKEG+PPD+QR ++ G+Q+EDGR + DY I+  +++HLVLR+ GGGG  P       SA F D+ ++  +    +S   PDWRI KPGLC+EGRC N  C A G MVI+N GF  FDL+    D   CP C   V P TC F +C W++ G K G++    G W  A D+YH F ED    VEW RLLI+ R + K+ +   + P      KP   D     C    + S   +       VL+CGH FH+ C+  W   S   CP CR +   P
Sbjct:  346 VQTLTGKVITIEAAPANSIEEIKCIIHDKEGLPPDQQRLLYAGQQMEDGRRLADYAIRAEASMHLVLRLRGGGGGPP------ASATFVDMENTGAMQCRQWSKSAPDWRIVKPGLCIEGRCKNVGCAAYGRMVIVNKGFDTFDLLLDA-DTCACPECDKHVKPKTCAFNNCWWKWNGIKEGDSRKYAGKWTLADDNYHCFAEDEAGSVEWTRLLIRARSIPKVAKSGGNEPIG----KP--FDMFCCICISSINSSGVHK-------VLDCGHAFHSPCIDAWVARSP-TCPHCRHKVVEP 626          
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A6A3IE52_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IE52_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.110e-65
Identity = 127/304 (41.78%), Postives = 168/304 (55.26%), Query Frame = 1
Query:    7 VSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWK-EAGDSYHRFKED--GEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWERDS-----MIVCPIC 894
            + ++TL GKT ++   + NTI+++K  IQ++EGIPPD+QR IF G+QLEDGR + DYNIQ GSTLHLVLR+ GG   +PR         FADVSD S   EH FS   P+WRI + GL +EGRC N  C A   +VI   GF+ F+L + G     CP C SKV P TCGF DC W+++G KA         W+  +G+ Y RF  D     +EW+ LLI V+PL +     L       R+   +V         C  C  + E L+      ECGH FH  C+  W + S     +  CP+C
Sbjct:  104 IYIKTLTGKTTHVNCHAANTIEEIKYDIQEQEGIPPDQQRIIFAGKQLEDGRKLSDYNIQYGSTLHLVLRLRGGY-VEPRC--------FADVSDGSISVEHEFSRTAPEWRICRKGLNIEGRCMNRTCIAYHELVIHPAGFEMFNLRKDG--DVTCPKCRSKVKPVTCGFYDCAWKFEGVKARGGFFTSSPWQIVSGEKYQRFDADETSGSIEWESLLILVKPLKEAVAAELVESAQEARLHSDLV---------CAVC--WTEILSGSGAGSECGHLFHCGCIENWSKWSEGQKTLTKCPVC 385          
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A6A3GVD8_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GVD8_9STRA)

HSP 1 Score: 218 bits (555), Expect = 1.060e-64
Identity = 120/309 (38.83%), Postives = 170/309 (55.02%), Query Frame = 1
Query:    7 VSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGDS-YHRFKEDGEE--VEWDRLLIQVRPLLKLEQRVLSAPPARKRV---KPSVVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWER-----DSMIVCPICRE 900
            +++++L GK         ++ID+VK +IQDK GIPPD+QR I  G QL+DGR + DY I+ GS L + LR+ GGGG +P R        F DVSD+S LTE + S+  PDWR+   GL +EG C N +C+A G MVI  +GF  F+LM   RD EC P C+    P TCGF  C W+++G ++ +   +   W+ AG+S YHRF  D     VEW+ LLI V+   + E   +  P   + +   K +V    W R         F  T     +  +CGH FH +C+  W       D++  CP+CR+
Sbjct:  120 LTIKSLTGKIAIFCAMPSDSIDNVKLRIQDKWGIPPDQQRLICAGVQLQDGRALSDYKIKTGSELLVFLRLRGGGGPRPPRK------VFVDVSDNSNLTEQSLSNEAPDWRVCDEGLNIEGECENRECEAFGQMVIYQYGFDSFNLMGD-RDVEC-PKCYETFTPITCGFYKCVWKFEGVRSSDGYFISSPWQNAGESKYHRFDSDENSGSVEWNSLLIVVKS--RRESTAVKIPATTRSMIVRKDNVCSICWSR---------FGSTAKRTMSTAKCGHTFHRECINKWSEWCSSHDALPSCPLCRQ 409          
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A5J4VNX4_9EUKA (Putative ring and ubiquitin domain containing protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4VNX4_9EUKA)

HSP 1 Score: 204 bits (519), Expect = 1.230e-57
Identity = 118/305 (38.69%), Postives = 166/305 (54.43%), Query Frame = 1
Query:    1 MDVSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGC-MVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGM--WKEAGDSYHRFKE-DGEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWERDSMIVCPICREE 903
            M + ++TL GKTI L V + NTI+++K  IQDKEGIPP++QR IF G+QLEDG  + DY I K +TLHLVLR+ GGG           +  F DV  S  L +  +S   P WR    G+ +EGRC NS C A    MVI N GF DFDL+R       CPMC+S++     GF +C WR   RK   TN ++    WK+AGD Y  + E      ++ RL++  + L    ++ + +    K +K + +    G C  C +    E     +  V++C H FH  C+  W +DS + CP C+E+
Sbjct:  308 MKIFIKTLTGKTIALQVQNDNTIEEIKSLIQDKEGIPPEQQRLIFAGKQLEDGYLLADYKILKEATLHLVLRLRGGG----------EAMNFVDVERSDALIQRQWSKTAPQWRCVSRGMAIEGRCDNSSCQAHNRGMVIFNVGFSDFDLLRNESH---CPMCYSRIKGIKPGFNNCIWRIDFRK---TNGIISRLKWKKAGDEYTTYDEAQAGTADFTRLIMHAKQLSDTREQTIVSEG--KEMKTTFI--VGGSCGLCHEDKNDERD--KNVIVMKCSHNFHKVCIKIW-KDSGLKCPHCKED 589          
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A815UV84_9BILA (Hypothetical protein n=6 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A815UV84_9BILA)

HSP 1 Score: 190 bits (482), Expect = 4.100e-56
Identity = 100/226 (44.25%), Postives = 133/226 (58.85%), Query Frame = 1
Query:    1 MDVSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPEC-CPMCHSKVVPSTCGFTDCTWRYKGRKAGETN----VLVGMWKEAGDSYHRFKED-GEEVEWDRLLIQ 660
            M V ++T   KT+ +     +TI+++K +IQ KEGIPPD+QR IFGG+QLEDGRT+ DYNIQK  TLH+V+R+ GG           +   F D+S+ SGL    +S   P WR A PGLCLEG+CTN +C A    VI+N  F+ FD++       C CP+C   V P+TCGF  C W +KG K G          G W EA ++YH F E     V W +L+I+
Sbjct:    1 MQVFIKTHTCKTLTIECECSDTIENLKYKIQGKEGIPPDQQRIIFGGKQLEDGRTLADYNIQKEFTLHMVIRLRGGD----------MGVDFVDLSNGSGLKRLNWSTSAPKWRKAGPGLCLEGQCTNRNCKAYSQAVIMNIRFKKFDMLLDVNQTTCQCPICKEYVKPNTCGFNRCWWCWKGIKEGGAGEPPKACSGNWTEADNAYHYFDEKISGSVTWRQLIIE 216          
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A835ZBQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBQ4_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.670e-55
Identity = 121/309 (39.16%), Postives = 159/309 (51.46%), Query Frame = 1
Query:    1 MDVSVRTLAGKTINLV-VGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPEC-CPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGDS-YHRFKEDGEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTWGRCT--RCTDC-SAFEETLASDE-TVLECGHRFHTKCLAGWER---DSMIVCPICR 897
            M + V+TL G    L  V S +TID +K+ IQD EGI PD+QR IF GRQLEDGR++ DY+IQK  TLHLVLR+ GGG             +FADV++   +   + SD  P WR  + G+ +EG C N  C+A   +VI   G   F L        C CP+C+S + P TCGF  C W Y G K G   ++ G W+ AGD  Y RF+E      W RL++  +P +K++ +     P     + S  D   GR     C  C   F     S + T   CG+R+H  CLA W      S   CP CR
Sbjct:  107 MKLFVKTLTGACFELDDVLSGDTIDALKEMIQDLEGILPDQQRIIFAGRQLEDGRSVADYSIQKEHTLHLVLRLRGGGCGPS-------GLQFADVTNDGAMERRSVSDDAPVWRTVRRGINMEGYCRNLRCEARVTLVIAPVGMAAFPL-----GSLCPCPVCYSAITPVTCGFYACAWTYDGAKEGG-ELVRGAWRTAGDDKYDRFRESDNMTTWSRLVLVAKPAVKVKPK-----PRATAAESSGADKAAGRLQPDECAVCLRGFGSGDGSSKATSTPCGYRYHALCLASWRECSHASCSKCPTCR 397          
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A835ZEG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG5_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.530e-54
Identity = 115/305 (37.70%), Postives = 160/305 (52.46%), Query Frame = 1
Query:    7 VSVRTLAGKTINLV-VGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGDS-YHRFKEDGEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTWGRCTRCTDCSAFEETLASDE---TVLECGHRFHTKCLAGWER---DSMIVCPICR 897
            + V+TL G+++ L  V   +T+D +K +I D EGIP D+QR IF G+QLED RT+ DY++++ STLHLVLR+ GGG           S +FADVS+   +   +FS   P WR  + GL +EG C ++ C A G +VI   G   F L  +      CPMC S + P TCGF  C W Y G K  +  ++ G W+ AGD  Y RF+E      W RL++  +P +K++    S P A   V  +V +      +   +C+             T   CGHR+H  CLAGW      S   CP CR
Sbjct:  156 IYVKTLRGQSLPLSGVLPCDTVDILKDRISDCEGIPADQQRLIFAGKQLEDSRTVDDYSMERDSTLHLVLRLRGGGCGPS-------SLQFADVSNDGAIERRSFSQDAPRWRTVRRGLNMEGYCRDARCKARGALVIAPIGMAAFPLGSRCT----CPMCGSAITPVTCGFNACAWTYDGAKE-DGELVRGAWRTAGDDKYERFRESDNMATWSRLVLVAKPAVKVK----SDPGAA--VADAVDNKEAAGASEPDECAVGLRGFGGRSGAVTTTRCGHRYHALCLAGWRECSHASCSKCPTCR 442          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZP2_9PHAE1.350e-15671.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3U0_ECTSI1.900e-10273.87RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A225VQY5_9STRA5.410e-7743.61Ubiquitin family protein n=1 Tax=Phytophthora mega... [more]
S4W648_9VIRU7.760e-6640.73Ubiquitin n=1 Tax=Pandoravirus salinus TaxID=13494... [more]
A0A6A3IE52_9STRA2.110e-6541.78Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A6A3GVD8_9STRA1.060e-6438.83Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A5J4VNX4_9EUKA1.230e-5738.69Putative ring and ubiquitin domain containing prot... [more]
A0A815UV84_9BILA4.100e-5644.25Hypothetical protein n=6 Tax=Rotaria magnacalcarat... [more]
A0A835ZBQ4_9STRA2.670e-5539.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEG5_9STRA1.530e-5437.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10647contigE-fasciculatus_F_contig10647:189..1151 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score218.8
Seed ortholog evalue3.6e-54
Seed eggNOG ortholog2880.D7FKZ7
KEGG koko:K02983
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
EggNOG free text desc.protein tag
EggNOG OGsCOG1552@1,KOG0003@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04121
Hectar predicted targeting categoryother localisation
Exons2
Model size924
Cds size924
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927562.479484-CDS-E-fasciculatus_F_contig10647:188..9151622927562.479484-CDS-E-fasciculatus_F_contig10647:188..915Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10647 189..915 +
1695995597.3342652-CDS-E-fasciculatus_F_contig10647:188..9151695995597.3342652-CDS-E-fasciculatus_F_contig10647:188..915Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10647 189..915 +
1622927562.4905574-CDS-E-fasciculatus_F_contig10647:954..11511622927562.4905574-CDS-E-fasciculatus_F_contig10647:954..1151Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10647 955..1151 +
1695995597.3469033-CDS-E-fasciculatus_F_contig10647:954..11511695995597.3469033-CDS-E-fasciculatus_F_contig10647:954..1151Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10647 955..1151 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10647.513.1prot_E-fasciculatus_F_contig10647.513.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10647 189..1151 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10647.513.1

>prot_E-fasciculatus_F_contig10647.513.1 ID=prot_E-fasciculatus_F_contig10647.513.1|Name=mRNA_E-fasciculatus_F_contig10647.513.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=308bp
MDVSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQL
EDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSG
LTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLM
RQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGD
SYHRFKEDGEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTW
GRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWERDSMIVCPICRE
ESSSPLF*
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mRNA from alignment at E-fasciculatus_F_contig10647:189..1151+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10647.513.1 ID=mRNA_E-fasciculatus_F_contig10647.513.1|Name=mRNA_E-fasciculatus_F_contig10647.513.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=963bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10647:189..1151+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGATGTCTCCGTCAGGACCCTCGCCGGAAAGACTATCAACCTTGTCGT CGGCTCGCACAACACGATCGACGACGTGAAGCAACAAATTCAGGACAAGG AGGGAATCCCGCCCGACGAGCAGCGTTATATATTCGGCGGCAGGCAGCTG GAGGACGGTCGTACGATGGGAGATTACAACATCCAAAAAGGATCTACGCT ACACTTGGTGCTTCGCATGAGCGGAGGAGGAGGAGATCAACCCCGTCGTG CCTCCATTGCCGTCAGCGCGAAGTTTGCCGACGTTTCCGACTCGTCCGGC CTCACAGAGCACGCCTTCTCGGACCACGAGCCGGACTGGAGGATTGCCAA GCCCGGGCTGTGCCTGGAAGGAAGGTGCACCAACAGCGACTGCGACGCTG ACGGCTGCATGGTCATCCTCAACCATGGGTTCCAGGACTTCGACCTGATG CGGCAAGGCAGAGACCCGGAGTGCTGCCCAATGTGCCACTCCAAGGTGGT GCCGAGCACGTGTGGCTTCACCGACTGCACGTGGAGGTACAAGGGGCGGA AGGCCGGGGAGACCAACGTCCTGGTCGGCATGTGGAAAGAGGCCGGCGAC AGCTACCACCGCTTCAAGGAAGATGGTGAGGAGGTGGAGTGGGACAGGCT GCTCATCCAGGTCAGGCCCCTGCTCAAGCTCGAGCAACGTGTCCTTTCCG CACCACCGGCGCGCAAGAGGGTGAAACGTCCCAACACTAGAGCCAATACC TCTACGTGCACCGTAGCAAGCGTGGTCGACCACACGTGGGGGCGATGCAC GAGGTGCACAGATTGTTCCGCGTTCGAGGAAACCCTTGCGTCCGACGAGA CGGTCCTGGAGTGTGGCCACCGGTTCCACACCAAGTGCCTCGCGGGCTGG GAGCGGGACTCGATGATCGTCTGCCCCATCTGCCGGGAAGAGTCGTCGTC GCCGCTATTTTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10647:189..1151+

>mRNA_E-fasciculatus_F_contig10647.513.1 ID=mRNA_E-fasciculatus_F_contig10647.513.1|Name=mRNA_E-fasciculatus_F_contig10647.513.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1848bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10647:189..1151+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGATGTCTCCGTCAGGACCCTCGCCGGAAAGACTATCAACCTTGTCGT
CGGCTCGCACAACACGATCGACGACGTGAAGCAACAAATTCAGGACAAGG
AGGGAATCCCGCCCGACGAGCAGCGTTATATATTCGGCGGCAGGCAGCTG
GAGGACGGTCGTACGATGGGAGATTACAACATCCAAAAAGGATCTACGCT
ACACTTGGTGCTTCGCATGAGCGGAGGAGGAGGAGATCAACCCCGTCGTG
CCTCCATTGCCGTCAGCGCGAAGTTTGCCGACGTTTCCGACTCGTCCGGC
CTCACAGAGCACGCCTTCTCGGACCACGAGCCGGACTGGAGGATTGCCAA
GCCCGGGCTGTGCCTGGAAGGAAGGTGCACCAACAGCGACTGCGACGCTG
ACGGCTGCATGGTCATCCTCAACCATGGGTTCCAGGACTTCGACCTGATG
CGGCAAGGCAGAGACCCGGAGTGCTGCCCAATGTGCCACTCCAAGGTGGT
GCCGAGCACGTGTGGCTTCACCGACTGCACGTGGAGGTACAAGGGGCGGA
AGGCCGGGGAGACCAACGTCCTGGTCGGCATGTGGAAAGAGGCCGGCGAC
AGCTACCACCGCTTCAAGGAAGATGGTGAGGAGGTGGAGTGGGACAGGCT
GCTCATCCAGGTCAGGCCCCTGCTCAAGCTCGAGCAACGTGTCCTTTCCG
CACCACCGGCGCGCAAGAGGGTGAAACATGGATGTCTCCGTCAGGACCCT
CGCCGGAAAGACTATCAACCTTGTCGTCGGCTCGCACAACACGATCGACG
ACGTGAAGCAACAAATTCAGGACAAGGAGGGAATCCCGCCCGACGAGCAG
CGTTATATATTCGGCGGCAGGCAGCTGGAGGACGGTCGTACGATGGGAGA
TTACAACATCCAAAAAGGATCTACGCTACACTTGGTGCTTCGCATGAGCG
GAGGAGGAGGAGATCAACCCCGTCGTGCCTCCATTGCCGTCAGCGCGAAG
TTTGCCGACGTTTCCGACTCGTCCGGCCTCACAGAGCACGCCTTCTCGGA
CCACGAGCCGGACTGGAGGATTGCCAAGCCCGGGCTGTGCCTGGAAGGAA
GGTGCACCAACAGCGACTGCGACGCTGACGGCTGCATGGTCATCCTCAAC
CATGGGTTCCAGGACTTCGACCTGATGCGGCAAGGCAGAGACCCGGAGTG
CTGCCCAATGTGCCACTCCAAGGTGGTGCCGAGCACGTGTGGCTTCACCG
ACTGCACGTGGAGGTACAAGGGGCGGAAGGCCGGGGAGACCAACGTCCTG
GTCGGCATGTGGAAAGAGGCCGGCGACAGCTACCACCGCTTCAAGGAAGA
TGGTGAGGAGGTGGAGTGGGACAGGCTGCTCATCCAGGTCAGGCCCCTGC
TCAAGCTCGAGCAACGTGTCCTTTCCGCACCACCGGCGCGCAAGAGGGTG
AAACCAAGCGTGGTCGACCACACGTGGGGGCGATGCACGAGGTGCACAGA
TTGTTCCGCGTTCGAGGAAACCCTTGCGTCCGACGAGACGGTCCTGGAGT
GTGGCCACCGGTTCCACACCAAGTGCCTCGCGGGCTGGGAGCGGGACTCG
ATGATCGTCTGCCCCATCTGCCGGGAAGAGTCGTCGTCGCCGCTATTTTA
GCAAGCGTGGTCGACCACACGTGGGGGCGATGCACGAGGTGCACAGATTG
TTCCGCGTTCGAGGAAACCCTTGCGTCCGACGAGACGGTCCTGGAGTGTG
GCCACCGGTTCCACACCAAGTGCCTCGCGGGCTGGGAGCGGGACTCGATG
ATCGTCTGCCCCATCTGCCGGGAAGAGTCGTCGTCGCCGCTATTTTAG
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