mRNA_E-fasciculatus_F_contig10633.504.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10633.504.1
Unique NamemRNA_E-fasciculatus_F_contig10633.504.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10633.504.1 vs. uniprot
Match: D7FTT1_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTT1_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 4.640e-112
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 1 
Query:    1 QIVDFLIDPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYLAPLKVGREQ 543
            QIVDFL+DPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYLAPLK+  EQ
Sbjct:  440 QIVDFLVDPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYLAPLKLSDEQ 620
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BLAST of mRNA_E-fasciculatus_F_contig10633.504.1 vs. uniprot
Match: A0A830C642_9LAMI (ATP-dependent zinc metalloprotease ftsh 8 mitochondrial n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A830C642_9LAMI)

HSP 1 Score: 201 bits (511), Expect = 4.310e-62
Identity = 105/180 (58.33%), Postives = 132/180 (73.33%), Query Frame = 1 
Query:    1 QIVDFLIDPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYLAPLKVGRE 540
            + V FL +P  Y+ LGA  PKG LLVGPPGTGKTL+AKA AGE+GVPFL   GS+F  ++VG+G + V+ LF +AR+ K SII+IDEID +GRARG    +GS   +RE+TLNQLL EMDGF    G+VV+A TNR D+LD ALLR GRFD Q  +D+PD KGR+Q+F  YL  +K+  E
Sbjct:    2 EFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQSKPSIIFIDEIDAIGRARGRGGFSGS-NDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQXXIDKPDIKGRDQIFQVYLKKIKLDHE 180
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BLAST of mRNA_E-fasciculatus_F_contig10633.504.1 vs. uniprot
Match: A0A2K3MBW5_TRIPR (ATP-dependent zinc metalloprotease ftsh mitochondrial-like (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MBW5_TRIPR)

HSP 1 Score: 198 bits (504), Expect = 8.520e-62
Identity = 104/172 (60.47%), Postives = 128/172 (74.42%), Query Frame = 1 
Query:    1 QIVDFLIDPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYL 516
            + V FL +P  Y  LGA  PKG LLVGPPGTGKTL+AKA AGEAGVPFL   GS+F  +YVG+G + V+ LF +A+K   SI++IDEID +GRARG   D+ +A  +RE+TLNQLL EMDGF    G+VV+A TNR D+LD ALLR GRFD Q+ VD+PD KGR+Q+F  YL
Sbjct:   18 EFVHFLKNPKKYQDLGAKIPKGALLVGPPGTGKTLLAKAAAGEAGVPFLSLSGSDFLELYVGVGCSRVRNLFYEAKKCAPSIVFIDEIDAIGRARGHG-DSSAAQNERESTLNQLLVEMDGFGTTAGVVVLACTNRPDILDKALLRPGRFDRQITVDKPDIKGRDQIFQIYL 188
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BLAST of mRNA_E-fasciculatus_F_contig10633.504.1 vs. uniprot
Match: A0A5B6ZQS0_DAVIN (Putative FTSH protease 10 (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZQS0_DAVIN)

HSP 1 Score: 198 bits (503), Expect = 1.110e-60
Identity = 104/180 (57.78%), Postives = 131/180 (72.78%), Query Frame = 1 
Query:    1 QIVDFLIDPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYLAPLKVGRE 540
            + V FL +P  Y+ LGA  PKG LLVGPPGTGKTL+AKA AGE+ VPFL   GS+F  ++VG+G + V+ LF +AR+   SII+IDEID +GRARG    +G    +RE+TLNQLL EMDGF    GIVV+A TNR D+LD ALLR GRFD Q+ +D+PD KGREQ+F  YL  +K+ +E
Sbjct:   61 EFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESSVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGG-NDERESTLNQLLVEMDGFGTTSGIVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGREQIFQIYLKKIKLDKE 239
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BLAST of mRNA_E-fasciculatus_F_contig10633.504.1 vs. uniprot
Match: A0A7W1SE81_9BACT (ATP-dependent zinc metalloprotease FtsH (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W1SE81_9BACT)

HSP 1 Score: 201 bits (512), Expect = 1.810e-60
Identity = 102/177 (57.63%), Postives = 133/177 (75.14%), Query Frame = 1 
Query:    1 QIVDFLIDPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYLAPLKV 531
            +IVDFL  P  + ++G   P+G+LLVGPPGTGKTL+A++ AGEAGVPFL+A GS+F  +Y G+G + V+RLF  AR+HK  II+IDE+D +GRARGG+     + ++RE TLNQLL EMDGFEG  GIVV+A+TNR+D+LD ALLR GRFD QV V  PD KGRE +   +   ++V
Sbjct:   57 EIVDFLRQPDRFSAVGGRIPRGVLLVGPPGTGKTLLARSIAGEAGVPFLFASGSDFVEMYAGVGASRVRRLFRDARRHKSCIIFIDELDAVGRARGGN---SLSHEEREQTLNQLLVEMDGFEGHAGIVVVAATNRQDILDPALLRPGRFDRQVTVGNPDLKGREAILRVHTRKIQV 230
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10633.504.1 vs. uniprot
Match: A0A2K3LZF5_TRIPR (ATP-dependent zinc metalloprotease ftsh mitochondrial-like (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LZF5_TRIPR)

HSP 1 Score: 202 bits (515), Expect = 4.390e-60
Identity = 106/179 (59.22%), Postives = 131/179 (73.18%), Query Frame = 1 
Query:    1 QIVDFLIDPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYLAPLKVGR 537
            + V FL +P  Y  LGA  PKG LLVGPPGTGKTL+AKA AGEAGVPFL   GS+F  ++VG+GV+ VK LF +ARK   SI++IDEID +G+ RGG   + S   +RE+TLNQLL EMDGF    G+VV+A TNR D+LD ALLR GRFD Q+ VD+PD KGR+Q+F  YL  +K+ R
Sbjct:  232 EFVHFLKNPKKYHDLGAKIPKGALLVGPPGTGKTLLAKATAGEAGVPFLSMSGSDFLELFVGVGVSRVKNLFYEARKSAPSIVFIDEIDAIGQTRGGG--SSSRNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITVDKPDIKGRDQIFQIYLKTIKLDR 408
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BLAST of mRNA_E-fasciculatus_F_contig10633.504.1 vs. uniprot
Match: A0A2G2JCI2_9GAMM (ATP-dependent zinc metalloprotease FtsH n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2G2JCI2_9GAMM)

HSP 1 Score: 205 bits (522), Expect = 7.900e-60
Identity = 103/175 (58.86%), Postives = 135/175 (77.14%), Query Frame = 1 
Query:    1 QIVDFLIDPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYLAPL 525
            ++VDFL  P  Y +LGA  PKG+LLVGPPGTGKTLIAKA AGEAGVPF Y  GSEF  ++VG+G A V+ LF +A++H  +II+IDE+D LGRARG    +G   + RE TLNQLL+E+DGF   +G++++A+TNR ++LD ALLR+GRFD QV VDRPD++GREQ+   +LA +
Sbjct:  170 EVVDFLNTPERYATLGAHVPKGVLLVGPPGTGKTLIAKAVAGEAGVPFFYISGSEFIEMFVGVGAARVRDLFEQAKQHAPAIIFIDELDALGRARGAGPMSGGHDE-REQTLNQLLTELDGFNPSEGVIILAATNRPEILDPALLRAGRFDRQVLVDRPDKQGREQILQVHLAKI 343
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BLAST of mRNA_E-fasciculatus_F_contig10633.504.1 vs. uniprot
Match: A4SB10_OSTLU (AAA domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4SB10_OSTLU)

HSP 1 Score: 202 bits (513), Expect = 1.040e-59
Identity = 106/175 (60.57%), Postives = 131/175 (74.86%), Query Frame = 1 
Query:    1 QIVDFLIDPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYLAPL 525
            + VDFL  P  Y++LGA  P G LLVGPPGTGKTL+AKA AGEAGVPFL   GS+F  ++VG+G + V+ LFA+AR+ K SII+IDEID +GR RG    AG    +RE TLNQLL EMDGF  K+G++V+A TNR D+LD ALLR GRFD Q+ VDRPD +GREQ+F  +LA +
Sbjct:    2 EFVDFLKSPKKYEALGAKIPHGALLVGPPGTGKTLLAKATAGEAGVPFLSISGSDFMEMFVGVGPSRVRDLFAQARQQKPSIIFIDEIDAIGRQRGRGGFAGG-NDERENTLNQLLVEMDGFGTKEGVIVLAGTNRPDILDRALLRPGRFDRQITVDRPDIQGREQIFRVHLAKI 175
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BLAST of mRNA_E-fasciculatus_F_contig10633.504.1 vs. uniprot
Match: A0A446NWA9_TRITD (AAA domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446NWA9_TRITD)

HSP 1 Score: 196 bits (499), Expect = 2.350e-59
Identity = 104/180 (57.78%), Postives = 132/180 (73.33%), Query Frame = 1 
Query:    1 QIVDFLIDPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYLAPLKVGRE 540
            + V FL +P  Y++LGA  PKG LL GPPGTGKTL+AKA AGE+GVPFL   GS+F  ++VG+G + V+ LF +AR+   SI++IDEID +GRARG    +G  ++ RE TLNQLL EMDGF    G+VV+A TNR D+LD ALLR GRFD Q+ +DRPD  GREQ+F  YLA LK+ +E
Sbjct:    2 EFVHFLKNPDKYEALGAKIPKGALLCGPPGTGKTLLAKATAGESGVPFLSISGSDFLEMFVGVGPSRVRGLFQEARECAPSIVFIDEIDAIGRARGRGGYSGGNSE-RENTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQISIDRPDINGREQIFRIYLAKLKLDKE 180
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10633.504.1 vs. uniprot
Match: A0A446J500_TRITD (AAA domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446J500_TRITD)

HSP 1 Score: 197 bits (500), Expect = 2.380e-59
Identity = 102/177 (57.63%), Postives = 131/177 (74.01%), Query Frame = 1 
Query:    1 QIVDFLIDPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYLAPLKV 531
            + V FL +P  Y+ LGA  PKG LLVGPPGTGKTL+AKA AGE+GVPF+   GS+F  ++VG+G + V+ LF +AR+   SI++IDEID +GRARG    +GS   +RE+TLNQLL EMDGF    G+VV+A TNR D+LD ALLR GRFD Q+ +D+PD KGR+Q+F  YL  LK+
Sbjct:    2 EFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFIDEIDAIGRARGRGGFSGS-NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKL 177
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10633.504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTT1_ECTSI4.640e-11297.79AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A830C642_9LAMI4.310e-6258.33ATP-dependent zinc metalloprotease ftsh 8 mitochon... [more]
A0A2K3MBW5_TRIPR8.520e-6260.47ATP-dependent zinc metalloprotease ftsh mitochondr... [more]
A0A5B6ZQS0_DAVIN1.110e-6057.78Putative FTSH protease 10 (Fragment) n=1 Tax=David... [more]
A0A7W1SE81_9BACT1.810e-6057.63ATP-dependent zinc metalloprotease FtsH (Fragment)... [more]
A0A2K3LZF5_TRIPR4.390e-6059.22ATP-dependent zinc metalloprotease ftsh mitochondr... [more]
A0A2G2JCI2_9GAMM7.900e-6058.86ATP-dependent zinc metalloprotease FtsH n=2 Tax=Ga... [more]
A4SB10_OSTLU1.040e-5960.57AAA domain-containing protein n=1 Tax=Ostreococcus... [more]
A0A446NWA9_TRITD2.350e-5957.78AAA domain-containing protein n=1 Tax=Triticum tur... [more]
A0A446J500_TRITD2.380e-5957.63AAA domain-containing protein n=1 Tax=Triticum tur... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10633contigE-fasciculatus_F_contig10633:17..4541 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score353.2
Seed ortholog evalue7.2e-95
Seed eggNOG ortholog2880.D7FTT1
KEGG koko:K03798,ko:K08956,ko:K09552
KEGG ModuleM00742
EggNOG free text desc.metalloendopeptidase activity
EggNOG OGsCOG0465@1,KOG0731@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko01000,ko01002,ko03110
Hectar predicted targeting categoryother localisation
Exons6
Model size543
Cds size543
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10633.504.1prot_E-fasciculatus_F_contig10633.504.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10633 17..4541 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927561.719581-CDS-E-fasciculatus_F_contig10633:16..1101622927561.719581-CDS-E-fasciculatus_F_contig10633:16..110Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10633 17..110 +
1695995596.8845177-CDS-E-fasciculatus_F_contig10633:16..1101695995596.8845177-CDS-E-fasciculatus_F_contig10633:16..110Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10633 17..110 +
1622927561.7330666-CDS-E-fasciculatus_F_contig10633:983..10651622927561.7330666-CDS-E-fasciculatus_F_contig10633:983..1065Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10633 984..1065 +
1695995596.895181-CDS-E-fasciculatus_F_contig10633:983..10651695995596.895181-CDS-E-fasciculatus_F_contig10633:983..1065Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10633 984..1065 +
1622927561.7473867-CDS-E-fasciculatus_F_contig10633:1405..15161622927561.7473867-CDS-E-fasciculatus_F_contig10633:1405..1516Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10633 1406..1516 +
1695995596.903478-CDS-E-fasciculatus_F_contig10633:1405..15161695995596.903478-CDS-E-fasciculatus_F_contig10633:1405..1516Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10633 1406..1516 +
1622927561.7590585-CDS-E-fasciculatus_F_contig10633:2189..23131622927561.7590585-CDS-E-fasciculatus_F_contig10633:2189..2313Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10633 2190..2313 +
1695995596.911495-CDS-E-fasciculatus_F_contig10633:2189..23131695995596.911495-CDS-E-fasciculatus_F_contig10633:2189..2313Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10633 2190..2313 +
1622927561.7732031-CDS-E-fasciculatus_F_contig10633:3049..30971622927561.7732031-CDS-E-fasciculatus_F_contig10633:3049..3097Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10633 3050..3097 +
1695995596.9214582-CDS-E-fasciculatus_F_contig10633:3049..30971695995596.9214582-CDS-E-fasciculatus_F_contig10633:3049..3097Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10633 3050..3097 +
1622927561.7888863-CDS-E-fasciculatus_F_contig10633:4457..45411622927561.7888863-CDS-E-fasciculatus_F_contig10633:4457..4541Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10633 4458..4541 +
1695995596.9311345-CDS-E-fasciculatus_F_contig10633:4457..45411695995596.9311345-CDS-E-fasciculatus_F_contig10633:4457..4541Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10633 4458..4541 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10633.504.1

>prot_E-fasciculatus_F_contig10633.504.1 ID=prot_E-fasciculatus_F_contig10633.504.1|Name=mRNA_E-fasciculatus_F_contig10633.504.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=181bp
QIVDFLIDPSAYDSLGASRPKGILLVGPPGTGKTLIAKACAGEAGVPFLY
ACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARGGSRD
AGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRF
DMQVDVDRPDRKGREQLFSKYLAPLKVGREQ
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mRNA from alignment at E-fasciculatus_F_contig10633:17..4541+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10633.504.1 ID=mRNA_E-fasciculatus_F_contig10633.504.1|Name=mRNA_E-fasciculatus_F_contig10633.504.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4525bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10633:17..4541+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGATCGTTGATTTCCTGATAGATCCGTCGGCGTACGACAGCCTTGGTGC
CTCTAGACCGAAGGGCATCTTGTTGGTGGGCCCCCCTGGCACAGGTAAGT
TGGCACGTTGGATAAAGCATGCAATCGGAGAAGTTGGGTTAGGTTTATGG
TCTGCGTCCCCCCTCCCCTCCCCTCCCTGTTCTATTTCGTTGTATTTCCT
CACTTCGCTCAATTTGTGGCGAAGGTGGTCCCACAGGTATGCATGTGCCC
CTACGTTCTTGACAACCCCAGCTTAACCGGTTCTATACTCTTGTCCAGTA
TGTTAGCTCACTTTGAAAAACCTGCGTAGACCAAGTAACTCCCTACGCAA
GTAAGGTTATTTCGAAGTAAGACCAGGGAGGGGGCACGCAGGCCCTAATC
CTAACCCCAACCCCAACAAAGCCGGTTCTATACTTTATCCAGTATGTTTG
CTTACGTAGAAAGCCTGCGTAGACTAATGGTTGTTGATGGTGAATTCCTT
AACTGACCTGAAGGTATTGTTGTGAGTGTTTGACAAGAAGGGTGCGGGCA
GGTGGTTTTTGAGGTCTAGATGCGTTCAACCCGGCGCATGGAAAATCATG
GGAAAAGTTTTGCAGATGTTGCTTTTCTTGTTGCGAGATCGAGATGCGAG
ATTTTCGGACGGGAGCGAGCGAAGGTCTCTTCGGTACCAAATATTTTATT
TATATTATCAATGTAAAAAACAACGGCGGCTGAATGTTTGTCGCGCGCTT
CAAGTTGTTTGCTCTCTTCTTGCGCCACTAAAATAACATCGTGACTAAAT
TACGTATTTGCAAGTACACGAACTGCCCCATGCCTGCTGCTGTCGGACCT
TGTGTTTTTTTTCTTGCCCCCCCCCCCCCCCCATTGGTTCGCACTGAAGA
TCACGTCGTTGTTGGGTGGATTCATTCAAAATTTCGATTGTTTTTGTCAT
TTTTTGTGCTTGTGCAGGCAAGACTCTCATTGCCAAGGCATGCGCTGGGG
AGGCCGGCGTCCCTTTCCTCTACGCTTGCGGGTCCGAGTTCAACGGAGTG
TGAGTTGCCTCCCACATCCCATACTTGTGCTCCGGGTATATTCGACATGG
CCGGAGTGTGACTCGTGCTCTGACCACACATGACGTTTTTTGTACCGCAG
TAGACATATAGGCCCTGTGCAGTGAGAGCCTGGGAGAGAACGTCGTTATC
AACGGAGAGACAAGTGTATCAATGTGCATGATGTGTGCCGTTTGTTGATG
AATATCGTTCACGTTGTCTTTTGGTCGTGGATACCTACTACTGCTGTAGG
CCGCATGAGGTAGACCACCTCCTGCACCGATTTTCCAACTGTTGTTTTTT
TTGCACCGCGTCCGTTTCGATTTTTTTCAACTGGTGCAGCTATGTTGGCA
TGGGAGTTGCAGCCGTCAAGAGGCTTTTTGCGAAGGCCAGGAAGCACAAG
AAGAGCATCATCTACATCGACGAGATCGACCACCTGGGACGTGCCAGGGG
GTGAGGAAACTGTAAATAATGATTCCTTTTTGCGCGTTTTCGTTTTGAAC
CTCTTTCTCTTGTCCGAGGCTTGAACCTCTTTCTCTTGTCTGAGGCTCGT
GTTGTTATTTTGTCTATGGGGTATAATACCCCCACGGCGACTATATAGGT
GTTGGTGTTGGCTTCTTGACCGAGTACTCGTTACAGTATTAGATTTTTTT
TTTTCGTTCTACATAGAAAGGTGCACCCCCTGTGGGCAGTTGGACTTAAG
AAGAGCTTAGAACTTCTGGCCTGTGTCAAACAGACTTGTGAGTTGGAAGG
TCCTGATATACGTAGTAGGTGTGCAAGACGTAGTAGAGCTACTCACCGTC
AGAATTGCGTGCAGTCGTGGCGCCGATACCTTGTATTGTAAGAGGGGGCT
CCAATTTCCAATATAATAGGGTCGAAATCGGTTGTCACAGACTCGACCAC
TATCGTAGGGTTACCTTCGAATTCCGGTATAAAGAGGGGACTGGCTTCGA
CATAAGAGGGTCCAGGGCCTTTGTCACACCACCCTCTTATATGTATCGGA
TCCACCACGTGCGCATTCATTCACCCGGGCCACACGGTCAACCTCCCCCC
CCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNCCTGGTGGTGGACGCCAA
AACATGATGATGGTGATGAACAGCGGGTCGAGAGACGCGGGGAGTGCTAC
TCAGGATCGAGAGGCCACCCTGAACCAGCTGCTGAGCGAGATGGACGGCT
TCGAGGGGAAGGACGGGATCGTGGTGATGGCCTCCACCAACCGGAAGGTG
AAGAGCCAATCAAAAACCTTTTGTTTTTCGCCGAGTCTGGGTTTCTTACT
CCTTAGGGTTAGTCGACGAATAGCCGCTATATAGGTTTTAGTGTAAAGGG
GTTCTTAGCCGAGCTCGCAAATGGTGCTCAAGTTCTTAGGCCTTGAGTTT
TTCGAGGCTGTACCAATGTCTTAACTGCCAACTTCGAAACCGCTTTAGTG
GCGCTAACCGCAACTCTGGGACCATTGGGATATTTCACTTTTTTCTTTTT
TTGTATCCGAATGGTCCATTTGTTTTTGTTTGTTGTTGTTTAACAGAAGT
AGACGTCCTGACGTGTTATATTTTGCGAAGCCGCATGTCCCCGCCTGTGG
TTGGGACAATGGCATCGTGGTGATGTCCTCTGCGGACTGGAAGTGCTTAC
TGTGCTGCACTACCATGCCGGAGACGTTTTTCTGTGGTGTGATCGGATTG
GTTTAACTTTCCCGTGCTTTGGTTTTTGATTTGGGTCGCGTTTTCCTTAC
GTGCCCTCGATCTTGTTTGTGCTTCGTGTGCCGATGTACAACCTACGCCT
TGTCACATACACTTACGTGCGCTTCTTTTGCTTGCTTACGACTCATCTTG
TTGGAGCCTCGTGTTTTTTCTTTATCGAGGTAGCAATGTGCTACTACCTA
CAACTGATATGATGTACCTGCTTCCCGATGCGTTTTCCCCCCGCCCATCT
TCCCGCTCTCGCTCTTGTGTGTGCTTTTGCCAGGACATGTTGGATGACGC
TTTGCTCCGATCTGGACGCTTCGACATGCAGGTACAACATGCGTGATATA
TGCCGCATATCATGGTGCCCCCCCTACGATAAGACCGTTTTTGTTCTTAT
TGTGTCTTGTCTTGTCAATTTTCGCCACCAACACCAGGGGGCCACGCGTT
GCTGTTGCTTTTCTTTTGTACTGTATCCCGCATAACAGCACCACACATAT
GTGCCTGGTCGGCGGGAACCCGGCACGGAACCCTCCGGCGTTGTAGGCGG
TTGTGGGAAGCGTCCTCCCTGTTATGTTTCATTTTGATTGGTCTTCTTGA
GGCCCTATCTCGCTTGGTGCGGTAGCTGGTCTTGCTTTCTATCATTTTGT
TTTCTCTTTTGAGTGTTTTTTGTACCCTATTTTGTTTTCTCTTCCGAGTG
TTTTTTGTACCCTATTTTGTTTTCTCTTTTGAGTGGGTTTTGTACCCTAT
TTTGTTTTCTCTTTTGAGTGTTTTTTGTACCCTATTTTGTTTTCGTTTCT
TTCTTGGGGGTCGTGTATGCCGGGTTTTGAGACCACGGGCTCCCCATCTT
TTGTGAGCTAGAGCTGATGTGAGAAAAACATCATCAAAACAAAATATCTC
CCACTCGGGTGCACTCTAAAATCATACATTATGTCACGAGACGCTGTGAG
TATGAACGTGACCACAATATCGTTTATTATTTTTTGGTTTGTGACGGCCA
ATTCGGAGCCAGTATCAAACCAGCACTCTTCTCTCCCTTTTTCAAAACGC
CAGCTCCCCTGGATGCATTGCCACCGGCCTTGTACAAGGCGAGCGGCCTT
GTACAGGGAATCACGTATGCTTGTGCCGTGTTGAGGTTCGTGGGCCGATC
TACTTGCGCCGCGCTCCTGAACAATCGCCGACCCCGCCCGTTCAAAGCGC
TGAGAAACAAGCAAAAAAGTAACACCAAGTGATCATCCGTGGATAGAGAT
GGGTTCGCTGTGATGTACTAAGAAAAAAAAAATACACCAGTGGTTGATTT
TGGTCCTGGCACTATCTGCGCTGCTACGAATGACGGCGAGGTGACGCAAT
AGGACCATGCATGCTTCAGCGTGACCCCGAAACATGTCGTCGATTGAGCG
CCCACAAACGTACACGCGCGCGCGCCTGTAGTGCGACAAGTACGTTAAGC
GTGTTGTAGTTGGTGGCATAAATCGCTCGGTCTCAAATTCTGCTGCGCAG
GACACTGGGCCGCGGACTGTTTTTTTACTCGCCTGTTGTTGATTTTGCTA
TCGCGCCCTTGGCATTGATAAAGGCGTCTGAACAAGACAATCGCCTGTCC
TCATTTGCCCCGCCTGTTGCTACTGCTGACATTGCCTGTCTCTTTCAACC
CGCCTGCTGCTACTGCCGTGTCCTTGGCAATGTTGTGCAAGGTGGACGTG
GACCGGCCAGACCGTAAGGGCCGCGAGCAGCTCTTTTCCAAGTACCTCGC
TCCCCTCAAGGTAGGTCGGGAACAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10633:17..4541+

>mRNA_E-fasciculatus_F_contig10633.504.1 ID=mRNA_E-fasciculatus_F_contig10633.504.1|Name=mRNA_E-fasciculatus_F_contig10633.504.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1086bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10633:17..4541+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGATCGTTGATTTCCTGATAGATCCGTCGGCGTACGACAGCCTTGGTGC
CTCTAGACCGAAGGGCATCTTGTTGGTGGGCCCCCCTGGCACAGCAGATC
GTTGATTTCCTGATAGATCCGTCGGCGTACGACAGCCTTGGTGCCTCTAG
ACCGAAGGGCATCTTGTTGGTGGGCCCCCCTGGCACAGGCAAGACTCTCA
TTGCCAAGGCATGCGCTGGGGAGGCCGGCGTCCCTTTCCTCTACGCTTGC
GGGTCCGAGTTCAACGGAGTGCAAGACTCTCATTGCCAAGGCATGCGCTG
GGGAGGCCGGCGTCCCTTTCCTCTACGCTTGCGGGTCCGAGTTCAACGGA
GTCTATGTTGGCATGGGAGTTGCAGCCGTCAAGAGGCTTTTTGCGAAGGC
CAGGAAGCACAAGAAGAGCATCATCTACATCGACGAGATCGACCACCTGG
GACGTGCCAGGGGCTATGTTGGCATGGGAGTTGCAGCCGTCAAGAGGCTT
TTTGCGAAGGCCAGGAAGCACAAGAAGAGCATCATCTACATCGACGAGAT
CGACCACCTGGGACGTGCCAGGGGCGGGTCGAGAGACGCGGGGAGTGCTA
CTCAGGATCGAGAGGCCACCCTGAACCAGCTGCTGAGCGAGATGGACGGC
TTCGAGGGGAAGGACGGGATCGTGGTGATGGCCTCCACCAACCGGAAGCG
GGTCGAGAGACGCGGGGAGTGCTACTCAGGATCGAGAGGCCACCCTGAAC
CAGCTGCTGAGCGAGATGGACGGCTTCGAGGGGAAGGACGGGATCGTGGT
GATGGCCTCCACCAACCGGAAGGACATGTTGGATGACGCTTTGCTCCGAT
CTGGACGCTTCGACATGCAGGACATGTTGGATGACGCTTTGCTCCGATCT
GGACGCTTCGACATGCAGGTGGACGTGGACCGGCCAGACCGTAAGGGCCG
CGAGCAGCTCTTTTCCAAGTACCTCGCTCCCCTCAAGGTAGGTCGGGAAC
AAGTGGACGTGGACCGGCCAGACCGTAAGGGCCGCGAGCAGCTCTTTTCC
AAGTACCTCGCTCCCCTCAAGGTAGGTCGGGAACAA
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