mRNA_E-fasciculatus_F_contig1063.502.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE) HSP 1 Score: 620 bits (1600), Expect = 1.060e-220 Identity = 305/329 (92.71%), Postives = 311/329 (94.53%), Query Frame = 1
Query: 1 RQDVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEPFSPERFLK 987
RQDVFGGLSIILVGDPAQLPPVGA PLWK+NPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDV KRRFI AVGAAER TFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVF +N VWVSAGLANGAVG +HMQWAEGQTPP LPEVVWVRVENYRGPQYFEQPLRRDW DGEIDLTNLCPIAPM+VMDDQPPTGRRR DGTSIARCFRMQLPLMLAFGITI+KS GN LLR DIGASERSDG+SFTAF RCRTLENMLLEPFS ERFLK
Sbjct: 78 RQDVFGGLSIILVGDPAQLPPVGARPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVHNIVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSHGNTLLRCSLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLK 406
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE) HSP 1 Score: 633 bits (1632), Expect = 2.030e-218 Identity = 310/329 (94.22%), Postives = 315/329 (95.74%), Query Frame = 1
Query: 1 RQDVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEPFSPERFLK 987
RQDVFGGLSIILVGDPAQLPPVGASPLWK+NPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDV KRRFI AVGAAER TFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVF NNNVWVSAGLANGAVG +HMQWAEGQTPP LPEVVWVRVENYRGPQYFEQPLRRDW DGEIDLTNLCPIAPM+VMDDQPPTGRRR DGTSIARCFRMQLPLMLAFGITI+KSQGN LLR F DIGASERSDG+SFTAF RCRTLENMLLEPFS ERFLK
Sbjct: 482 RQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLK 810
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5KGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT1_9PHAE) HSP 1 Score: 479 bits (1234), Expect = 7.420e-166 Identity = 232/251 (92.43%), Postives = 236/251 (94.02%), Query Frame = 1
Query: 235 MQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEPFSPERFLK 987
MQTADDWDV KRRFI AVGAAER TFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVF NNN WVSAGLANGAVG +HMQWAEGQTPP LPEVVWVRVENYRGPQYFEQPLRRDW DGEIDLTNLCPIAPM+VMDDQPPTGRRR DGTSIARCFRMQLPLMLAFGITI+KSQGN LLR F DIGASERSDG+SFTAF RCRTLENMLLEPFS ERFLK
Sbjct: 1 MQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNNWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLK 251
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE) HSP 1 Score: 425 bits (1093), Expect = 2.240e-134 Identity = 208/217 (95.85%), Postives = 210/217 (96.77%), Query Frame = 1
Query: 1 RQDVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQY 651
RQDVFGGLSIILVGDPAQLPPVGASPLWK+NPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDV KRRFI AVGAAER TFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVF NNNVWVSAGLANGAVG +HMQWAEGQTPP LPEVVWVRVENYRGPQY
Sbjct: 1223 RQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQY 1439
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE) HSP 1 Score: 420 bits (1080), Expect = 1.640e-131 Identity = 206/322 (63.98%), Postives = 239/322 (74.22%), Query Frame = 1
Query: 10 VFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDG----TSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEP 963
+FGGL II+VGD QL V SP+W + P + LS QGL AWL MN AV+LTQVMRQQG QAAFR+TLLRIAEG T DW+ + RF AV AAER +FD+AVHIFPTN ADDWNWRRL +LGTPIARI+A H++HGY + S+RFRGL+ +FLA+GARVF NNNVW S GLANGA G +HMQWA G PP LPEVVWVRVENYRG QYF +PL R WG +DL N+ PI+P++ DD PP RR G + RC R QLPLMLAFGITIHKSQG LLR F DIG E+SDG++FTA RCR L+NMLL+P
Sbjct: 1295 LFGGLCIIMVGDIIQLLTVAQSPMWTSRPQSSALSGQGLYAWLGMNAAVQLTQVMRQQGAAQAAFRETLLRIAEGEATEADWNTLRPRFTTAVDAAERESFDNAVHIFPTNGAADDWNWRRLQALGTPIARIDADHSMHGYAHIPSDRFRGLEGQLFLAVGARVFINNNVWTSGGLANGAAGEVVHMQWAPGTQPPSLPEVVWVRVENYRGEQYFSEPLERPWGGRVVDLRNVVPISPIDAPDDHPPAALRRRGGGANTNAQGRCIRTQLPLMLAFGITIHKSQGATLLRCFLDIGEQEKSDGQTFTALSRCRALDNMLLQP 1616
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5KDM0_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM0_9PHAE) HSP 1 Score: 241 bits (614), Expect = 1.160e-75 Identity = 118/123 (95.93%), Postives = 119/123 (96.75%), Query Frame = 1
Query: 1 RQDVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWR 369
RQDVFGGLSIILVGDPA LPPVGASPLWK+NPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDV KRRFI AVGAAER TFDDAVHIFPTNALADDWNWR
Sbjct: 102 RQDVFGGLSIILVGDPAHLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWR 224
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: UPI00106AD06C (ATP-dependent DNA helicase PIF1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106AD06C) HSP 1 Score: 203 bits (517), Expect = 2.430e-59 Identity = 131/329 (39.82%), Postives = 170/329 (51.67%), Query Frame = 1
Query: 10 VFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQG--PEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFE-QPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEPFSPERFLK 987
VFGG S+IL GDP QLPPV PL+ PS + QG QA+ NN V+LT R QG PEQ FRD LLR+ +G TADDW++ R F+D+ +F +N ++N +L L PIA INA H+ + + GL+ +FLA GARV N+W S GL NGA G + + PP LP V V ENYRGP + E QPL PI P+ V T I R QLPL LA+ +TIHK+QG L + + DIG SER+ G S+ A R +TL + ++EP + ER +
Sbjct: 24 VFGGKSLILTGDPGQLPPVADKPLYHAKPSNA-VGEQGYQAYRMFNNVVKLTDNQRVQGNTPEQVQFRDLLLRLRKGDSTADDWELLLTR--QPSNITNLCEFEDSTRLFYSNEQVGNYNHEQLTKLEHPIAHINACHSSSLAKKIFPDDMSGLEPVVFLAKGARVILTMNLWSSVGLCNGATGTVVDFIYQNNHQPPDLPIAVIVEFENYRGPVFDESQPL-------------CIPICPITVSCQ-----------TEIGFHERQQLPLRLAWALTIHKTQGLSLPKAWIDIGKSERTAGVSYVAISRTKTLASCVIEPMTYERLAR 325
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5KA18_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA18_9PHAE) HSP 1 Score: 204 bits (518), Expect = 2.210e-56 Identity = 102/107 (95.33%), Postives = 104/107 (97.20%), Query Frame = 1
Query: 1 RQDVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDA 321
RQDVFGGLSIILVGDPAQLPPVGASPLWK+NPSTGGLSMQGLQAWLSMNNAVELT+VMRQQGPEQAAFRDTLLRIAEGMQTADDWDV KRRFI AVGAAER TFDDA
Sbjct: 600 RQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTRVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDA 706
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: UPI00077A905F (ATP-dependent DNA helicase PIF1-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A905F) HSP 1 Score: 196 bits (497), Expect = 1.180e-54 Identity = 126/326 (38.65%), Postives = 172/326 (52.76%), Query Frame = 1
Query: 7 DVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQG--PEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEPFSPER 978
+VFG LS+IL GDPAQLPPV PL+ + P T + QG A+L N ++L+ R QG PEQ+ FR+ L R+ G T DW + R A F DA ++ +N ++N +L++L PIA +NA H+ S + GL+ IFLA GA V N+W + GL NGA G + +A Q PP LPE V V+ +NYRGP E +++ PI P+ V + DG R QLPL LA+ ITIHKSQG L + + DIG +ER+ G S+ A R RTL + ++EP + ER
Sbjct: 200 EVFGHLSLILFGDPAQLPPVADRPLYHSKP-TSSIGEQGHLAYLMFTNVIKLSVNQRVQGSNPEQSQFRELLTRLHTGDCTEQDWKLLLTR--QPTNAPNLVEFQDATRLYFSNEEVANYNVEKLSALQHPIACVNAHHSSDLAKKASPDEMAGLEPCIFLAKGAHVMLTLNLWTAVGLCNGATGTVIDFIYANNQQPPDLPEAVIVKFDNYRGPSITES------------ISSCVPICPITVSS-------QTLDGLH----ERQQLPLKLAWAITIHKSQGLTLPKAWIDIGQTERTAGISYVAISRVRTLSSCIIEPMTFER 499
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: UPI00106CAC9B (uncharacterized protein LOC114526773 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CAC9B) HSP 1 Score: 197 bits (502), Expect = 2.070e-54 Identity = 124/322 (38.51%), Postives = 170/322 (52.80%), Query Frame = 1
Query: 10 VFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQG--PEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEPFS 969
VFGG S+IL GDP QLPPV PL+ PS+ + QG QA+ V+LT R QG EQ FR+ LLR+ +G T DDW + R V + F+DA +F +N ++N +L+ L PIAR+NA H+ +SS+ GL+ +FL GARV N+W S GL NGA G+ + + + PP LP V + ENYRGP + +D + PI P+ V Q TG R QLPL LA+ +TIHKSQG L R + +IG SER+ G S+ A R ++L + ++EP +
Sbjct: 24 VFGGNSLILTGDPGQLPPVADKPLYHAKPSSA-VGEQGFQAYQMFEKVVKLTVNQRVQGVTSEQIIFRELLLRLRKGESTIDDWKLLLTRQPSKVTNIKE--FEDATRLFYSNEQVANYNHEQLSKLSHPIARVNARHSSEMAKKISSDDMSGLEPVVFLTKGARVMLTMNLWSSVGLCNGATGIVVDIIYHNNHQPPDLPIAVIIEFENYRGPAF------------NVDKPSCIPICPITVSS-QSETGFHE----------RQQLPLRLAWALTIHKSQGLTLARAWINIGKSERTAGVSYVAISRVKSLSSCVIEPMT 319 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1063.502.1 >prot_E-fasciculatus_F_contig1063.502.1 ID=prot_E-fasciculatus_F_contig1063.502.1|Name=mRNA_E-fasciculatus_F_contig1063.502.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=329bp RQDVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNback to top mRNA from alignment at E-fasciculatus_F_contig1063:6687..7673+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1063.502.1 ID=mRNA_E-fasciculatus_F_contig1063.502.1|Name=mRNA_E-fasciculatus_F_contig1063.502.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=987bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1063:6687..7673+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1063:6687..7673+ >mRNA_E-fasciculatus_F_contig1063.502.1 ID=mRNA_E-fasciculatus_F_contig1063.502.1|Name=mRNA_E-fasciculatus_F_contig1063.502.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1974bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1063:6687..7673+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |