mRNA_E-fasciculatus_F_contig1063.502.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1063.502.1
Unique NamemRNA_E-fasciculatus_F_contig1063.502.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE)

HSP 1 Score: 620 bits (1600), Expect = 1.060e-220
Identity = 305/329 (92.71%), Postives = 311/329 (94.53%), Query Frame = 1
Query:    1 RQDVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEPFSPERFLK 987
            RQDVFGGLSIILVGDPAQLPPVGA PLWK+NPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDV KRRFI AVGAAER TFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVF +N VWVSAGLANGAVG  +HMQWAEGQTPP LPEVVWVRVENYRGPQYFEQPLRRDW DGEIDLTNLCPIAPM+VMDDQPPTGRRR DGTSIARCFRMQLPLMLAFGITI+KS GN LLR   DIGASERSDG+SFTAF RCRTLENMLLEPFS ERFLK
Sbjct:   78 RQDVFGGLSIILVGDPAQLPPVGARPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVHNIVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSHGNTLLRCSLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLK 406          
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE)

HSP 1 Score: 633 bits (1632), Expect = 2.030e-218
Identity = 310/329 (94.22%), Postives = 315/329 (95.74%), Query Frame = 1
Query:    1 RQDVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEPFSPERFLK 987
            RQDVFGGLSIILVGDPAQLPPVGASPLWK+NPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDV KRRFI AVGAAER TFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVF NNNVWVSAGLANGAVG  +HMQWAEGQTPP LPEVVWVRVENYRGPQYFEQPLRRDW DGEIDLTNLCPIAPM+VMDDQPPTGRRR DGTSIARCFRMQLPLMLAFGITI+KSQGN LLR F DIGASERSDG+SFTAF RCRTLENMLLEPFS ERFLK
Sbjct:  482 RQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLK 810          
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5KGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT1_9PHAE)

HSP 1 Score: 479 bits (1234), Expect = 7.420e-166
Identity = 232/251 (92.43%), Postives = 236/251 (94.02%), Query Frame = 1
Query:  235 MQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEPFSPERFLK 987
            MQTADDWDV KRRFI AVGAAER TFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVF NNN WVSAGLANGAVG  +HMQWAEGQTPP LPEVVWVRVENYRGPQYFEQPLRRDW DGEIDLTNLCPIAPM+VMDDQPPTGRRR DGTSIARCFRMQLPLMLAFGITI+KSQGN LLR F DIGASERSDG+SFTAF RCRTLENMLLEPFS ERFLK
Sbjct:    1 MQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNNWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLK 251          
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 425 bits (1093), Expect = 2.240e-134
Identity = 208/217 (95.85%), Postives = 210/217 (96.77%), Query Frame = 1
Query:    1 RQDVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQY 651
            RQDVFGGLSIILVGDPAQLPPVGASPLWK+NPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDV KRRFI AVGAAER TFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVF NNNVWVSAGLANGAVG  +HMQWAEGQTPP LPEVVWVRVENYRGPQY
Sbjct: 1223 RQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQY 1439          
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 420 bits (1080), Expect = 1.640e-131
Identity = 206/322 (63.98%), Postives = 239/322 (74.22%), Query Frame = 1
Query:   10 VFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDG----TSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEP 963
            +FGGL II+VGD  QL  V  SP+W + P +  LS QGL AWL MN AV+LTQVMRQQG  QAAFR+TLLRIAEG  T  DW+  + RF  AV AAER +FD+AVHIFPTN  ADDWNWRRL +LGTPIARI+A H++HGY  + S+RFRGL+  +FLA+GARVF NNNVW S GLANGA G  +HMQWA G  PP LPEVVWVRVENYRG QYF +PL R WG   +DL N+ PI+P++  DD PP   RR  G     +  RC R QLPLMLAFGITIHKSQG  LLR F DIG  E+SDG++FTA  RCR L+NMLL+P
Sbjct: 1295 LFGGLCIIMVGDIIQLLTVAQSPMWTSRPQSSALSGQGLYAWLGMNAAVQLTQVMRQQGAAQAAFRETLLRIAEGEATEADWNTLRPRFTTAVDAAERESFDNAVHIFPTNGAADDWNWRRLQALGTPIARIDADHSMHGYAHIPSDRFRGLEGQLFLAVGARVFINNNVWTSGGLANGAAGEVVHMQWAPGTQPPSLPEVVWVRVENYRGEQYFSEPLERPWGGRVVDLRNVVPISPIDAPDDHPPAALRRRGGGANTNAQGRCIRTQLPLMLAFGITIHKSQGATLLRCFLDIGEQEKSDGQTFTALSRCRALDNMLLQP 1616          
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5KDM0_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM0_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 1.160e-75
Identity = 118/123 (95.93%), Postives = 119/123 (96.75%), Query Frame = 1
Query:    1 RQDVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWR 369
            RQDVFGGLSIILVGDPA LPPVGASPLWK+NPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDV KRRFI AVGAAER TFDDAVHIFPTNALADDWNWR
Sbjct:  102 RQDVFGGLSIILVGDPAHLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWR 224          
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: UPI00106AD06C (ATP-dependent DNA helicase PIF1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106AD06C)

HSP 1 Score: 203 bits (517), Expect = 2.430e-59
Identity = 131/329 (39.82%), Postives = 170/329 (51.67%), Query Frame = 1
Query:   10 VFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQG--PEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFE-QPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEPFSPERFLK 987
            VFGG S+IL GDP QLPPV   PL+   PS   +  QG QA+   NN V+LT   R QG  PEQ  FRD LLR+ +G  TADDW++   R            F+D+  +F +N    ++N  +L  L  PIA INA H+      +  +   GL+  +FLA GARV    N+W S GL NGA G  +   +     PP LP  V V  ENYRGP + E QPL               PI P+ V              T I    R QLPL LA+ +TIHK+QG  L + + DIG SER+ G S+ A  R +TL + ++EP + ER  +
Sbjct:   24 VFGGKSLILTGDPGQLPPVADKPLYHAKPSNA-VGEQGYQAYRMFNNVVKLTDNQRVQGNTPEQVQFRDLLLRLRKGDSTADDWELLLTR--QPSNITNLCEFEDSTRLFYSNEQVGNYNHEQLTKLEHPIAHINACHSSSLAKKIFPDDMSGLEPVVFLAKGARVILTMNLWSSVGLCNGATGTVVDFIYQNNHQPPDLPIAVIVEFENYRGPVFDESQPL-------------CIPICPITVSCQ-----------TEIGFHERQQLPLRLAWALTIHKTQGLSLPKAWIDIGKSERTAGVSYVAISRTKTLASCVIEPMTYERLAR 325          
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: A0A6H5KA18_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA18_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 2.210e-56
Identity = 102/107 (95.33%), Postives = 104/107 (97.20%), Query Frame = 1
Query:    1 RQDVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDA 321
            RQDVFGGLSIILVGDPAQLPPVGASPLWK+NPSTGGLSMQGLQAWLSMNNAVELT+VMRQQGPEQAAFRDTLLRIAEGMQTADDWDV KRRFI AVGAAER TFDDA
Sbjct:  600 RQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTRVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDA 706          
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: UPI00077A905F (ATP-dependent DNA helicase PIF1-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A905F)

HSP 1 Score: 196 bits (497), Expect = 1.180e-54
Identity = 126/326 (38.65%), Postives = 172/326 (52.76%), Query Frame = 1
Query:    7 DVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQG--PEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEPFSPER 978
            +VFG LS+IL GDPAQLPPV   PL+ + P T  +  QG  A+L   N ++L+   R QG  PEQ+ FR+ L R+  G  T  DW +   R      A     F DA  ++ +N    ++N  +L++L  PIA +NA H+       S +   GL+  IFLA GA V    N+W + GL NGA G  +   +A  Q PP LPE V V+ +NYRGP   E             +++  PI P+ V         +  DG       R QLPL LA+ ITIHKSQG  L + + DIG +ER+ G S+ A  R RTL + ++EP + ER
Sbjct:  200 EVFGHLSLILFGDPAQLPPVADRPLYHSKP-TSSIGEQGHLAYLMFTNVIKLSVNQRVQGSNPEQSQFRELLTRLHTGDCTEQDWKLLLTR--QPTNAPNLVEFQDATRLYFSNEEVANYNVEKLSALQHPIACVNAHHSSDLAKKASPDEMAGLEPCIFLAKGAHVMLTLNLWTAVGLCNGATGTVIDFIYANNQQPPDLPEAVIVKFDNYRGPSITES------------ISSCVPICPITVSS-------QTLDGLH----ERQQLPLKLAWAITIHKSQGLTLPKAWIDIGQTERTAGISYVAISRVRTLSSCIIEPMTFER 499          
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Match: UPI00106CAC9B (uncharacterized protein LOC114526773 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CAC9B)

HSP 1 Score: 197 bits (502), Expect = 2.070e-54
Identity = 124/322 (38.51%), Postives = 170/322 (52.80%), Query Frame = 1
Query:   10 VFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQG--PEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAERATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPHLPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPPTGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERSDGRSFTAFGRCRTLENMLLEPFS 969
            VFGG S+IL GDP QLPPV   PL+   PS+  +  QG QA+      V+LT   R QG   EQ  FR+ LLR+ +G  T DDW +   R    V   +   F+DA  +F +N    ++N  +L+ L  PIAR+NA H+      +SS+   GL+  +FL  GARV    N+W S GL NGA G+ + + +     PP LP  V +  ENYRGP +             +D  +  PI P+ V   Q  TG             R QLPL LA+ +TIHKSQG  L R + +IG SER+ G S+ A  R ++L + ++EP +
Sbjct:   24 VFGGNSLILTGDPGQLPPVADKPLYHAKPSSA-VGEQGFQAYQMFEKVVKLTVNQRVQGVTSEQIIFRELLLRLRKGESTIDDWKLLLTRQPSKVTNIKE--FEDATRLFYSNEQVANYNHEQLSKLSHPIARVNARHSSEMAKKISSDDMSGLEPVVFLTKGARVMLTMNLWSSVGLCNGATGIVVDIIYHNNHQPPDLPIAVIIEFENYRGPAF------------NVDKPSCIPICPITVSS-QSETGFHE----------RQQLPLRLAWALTIHKSQGLTLARAWINIGKSERTAGVSYVAISRVKSLSSCVIEPMT 319          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1063.502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDL6_9PHAE1.060e-22092.71ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K558_9PHAE2.030e-21894.22ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KGT1_9PHAE7.420e-16692.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFJ0_9PHAE2.240e-13495.85ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K692_9PHAE1.640e-13163.98ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KDM0_9PHAE1.160e-7595.93ATP-dependent DNA helicase (Fragment) n=1 Tax=Ecto... [more]
UPI00106AD06C2.430e-5939.82ATP-dependent DNA helicase PIF1-like n=1 Tax=Dendr... [more]
A0A6H5KA18_9PHAE2.210e-5695.33ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI00077A905F1.180e-5438.65ATP-dependent DNA helicase PIF1-like n=1 Tax=Acrop... [more]
UPI00106CAC9B2.070e-5438.51uncharacterized protein LOC114526773 n=1 Tax=Dendr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1063contigE-fasciculatus_F_contig1063:6687..7673 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score170.2
Seed ortholog evalue1.6e-39
Seed eggNOG ortholog38033.XP_001222909.1
KEGG koko:K15255
EggNOG free text desc.Belongs to the helicase family
EggNOG OGs21AWX@147550,39RYU@33154,3P64X@4751,3QU0F@4890,3UC2G@5139,COG0507@1,KOG0987@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelSordariales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029,ko03032
Hectar predicted targeting categoryother localisation
Exons1
Model size987
Cds size987
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927561.607129-CDS-E-fasciculatus_F_contig1063:6686..76731622927561.607129-CDS-E-fasciculatus_F_contig1063:6686..7673Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1063 6687..7673 +
1695995596.820817-CDS-E-fasciculatus_F_contig1063:6686..76731695995596.820817-CDS-E-fasciculatus_F_contig1063:6686..7673Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1063 6687..7673 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1063.502.1prot_E-fasciculatus_F_contig1063.502.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1063 6687..7673 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1063.502.1

>prot_E-fasciculatus_F_contig1063.502.1 ID=prot_E-fasciculatus_F_contig1063.502.1|Name=mRNA_E-fasciculatus_F_contig1063.502.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=329bp
RQDVFGGLSIILVGDPAQLPPVGASPLWKNNPSTGGLSMQGLQAWLSMNN
AVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVPKRRFIPAVGAAE
RATFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSE
RFRGLQSHIFLAIGARVFTNNNVWVSAGLANGAVGVGLHMQWAEGQTPPH
LPEVVWVRVENYRGPQYFEQPLRRDWGDGEIDLTNLCPIAPMEVMDDQPP
TGRRRDDGTSIARCFRMQLPLMLAFGITIHKSQGNILLRYFSDIGASERS
DGRSFTAFGRCRTLENMLLEPFSPERFLK
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mRNA from alignment at E-fasciculatus_F_contig1063:6687..7673+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1063.502.1 ID=mRNA_E-fasciculatus_F_contig1063.502.1|Name=mRNA_E-fasciculatus_F_contig1063.502.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=987bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1063:6687..7673+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGTCAAGACGTATTCGGGGGTCTGAGCATCATCCTCGTCGGCGACCCAGC CCAGCTTCCTCCGGTCGGGGCTAGCCCGTTGTGGAAAAACAACCCTTCCA CGGGCGGCCTCAGCATGCAAGGACTGCAAGCGTGGCTGTCGATGAACAAC GCCGTCGAGCTCACGCAGGTCATGCGCCAACAAGGTCCGGAGCAGGCCGC CTTCCGCGACACACTACTGCGTATCGCCGAGGGCATGCAGACCGCAGACG ACTGGGACGTACCCAAGCGAAGGTTCATCCCCGCGGTGGGGGCTGCAGAA CGCGCAACCTTCGACGACGCTGTTCACATCTTCCCCACGAACGCCCTCGC CGACGACTGGAACTGGCGGCGGTTGAACTCTCTAGGGACCCCCATCGCGA GAATCAACGCCACTCACACCATCCACGGCTACAACGCAGTGTCCTCCGAA AGGTTCAGGGGCTTGCAATCGCACATCTTCCTCGCCATCGGGGCGCGTGT GTTCACCAACAACAACGTTTGGGTGTCTGCCGGCCTTGCCAACGGAGCCG TCGGGGTAGGGTTACACATGCAGTGGGCAGAGGGCCAAACGCCGCCACAC CTGCCGGAGGTCGTGTGGGTTCGCGTGGAGAACTACCGGGGTCCTCAATA CTTCGAGCAACCACTCCGGAGGGACTGGGGCGACGGCGAAATTGACCTCA CGAACCTCTGCCCCATCGCCCCCATGGAGGTCATGGATGATCAACCACCC ACGGGTCGCCGGAGAGATGACGGCACCTCCATCGCCCGCTGCTTCAGGAT GCAGTTGCCCTTGATGCTCGCCTTCGGTATCACCATCCACAAAAGTCAGG GCAACATCTTGCTACGCTACTTCTCGGACATCGGAGCAAGCGAGAGGAGC GACGGCCGATCCTTCACTGCCTTCGGCCGGTGCCGTACGCTGGAGAACAT GCTCCTCGAGCCCTTCTCCCCTGAGCGCTTCCTCAAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1063:6687..7673+

>mRNA_E-fasciculatus_F_contig1063.502.1 ID=mRNA_E-fasciculatus_F_contig1063.502.1|Name=mRNA_E-fasciculatus_F_contig1063.502.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1974bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1063:6687..7673+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGTCAAGACGTATTCGGGGGTCTGAGCATCATCCTCGTCGGCGACCCAGC
CCAGCTTCCTCCGGTCGGGGCTAGCCCGTTGTGGAAAAACAACCCTTCCA
CGGGCGGCCTCAGCATGCAAGGACTGCAAGCGTGGCTGTCGATGAACAAC
GCCGTCGAGCTCACGCAGGTCATGCGCCAACAAGGTCCGGAGCAGGCCGC
CTTCCGCGACACACTACTGCGTATCGCCGAGGGCATGCAGACCGCAGACG
ACTGGGACGTACCCAAGCGAAGGTTCATCCCCGCGGTGGGGGCTGCAGAA
CGCGCAACCTTCGACGACGCTGTTCACATCTTCCCCACGAACGCCCTCGC
CGACGACTGGAACTGGCGGCGGTTGAACTCTCTAGGGACCCCCATCGCGA
GAATCAACGCCACTCACACCATCCACGGCTACAACGCAGTGTCCTCCGAA
AGGTTCAGGGGCTTGCAATCGCACATCTTCCTCGCCATCGGGGCGCGTGT
GTTCACCAACAACAACGTTTGGGTGTCTGCCGGCCTTGCCAACGGAGCCG
TCGGGGTAGGGTTACACATGCAGTGGGCAGAGGGCCAAACGCCGCCACAC
CTGCCGGAGGTCGTGTGGGTTCGCGTGGAGAACTACCGGGGTCCTCAATA
CTTCGAGCAACCACTCCGGAGGGACTGGGGCGACGGCGAAATTGACCTCA
CGAACCTCTGCCCCATCGCCCCCATGGAGGTCATGGATGATCAACCACCC
ACGGGTCGCCGGAGAGATGACGGCACCTCCATCGCCCGCTGCTTCAGGAT
GCAGTTGCCCTTGATGCTCGCCTTCGGTATCACCATCCACAAAAGTCAGG
GCAACATCTTGCTACGCTACTTCTCGGACATCGGAGCAAGCGAGAGGAGC
GACGGCCGATCCTTCACTGCCTTCGGCCGGTGCCGTACGCTGGAGAACAT
GCTCCTCGAGCCCTTCTCCCCTGAGCGCTTCCTCAAACGTCAAGACGTAT
TCGGGGGTCTGAGCATCATCCTCGTCGGCGACCCAGCCCAGCTTCCTCCG
GTCGGGGCTAGCCCGTTGTGGAAAAACAACCCTTCCACGGGCGGCCTCAG
CATGCAAGGACTGCAAGCGTGGCTGTCGATGAACAACGCCGTCGAGCTCA
CGCAGGTCATGCGCCAACAAGGTCCGGAGCAGGCCGCCTTCCGCGACACA
CTACTGCGTATCGCCGAGGGCATGCAGACCGCAGACGACTGGGACGTACC
CAAGCGAAGGTTCATCCCCGCGGTGGGGGCTGCAGAACGCGCAACCTTCG
ACGACGCTGTTCACATCTTCCCCACGAACGCCCTCGCCGACGACTGGAAC
TGGCGGCGGTTGAACTCTCTAGGGACCCCCATCGCGAGAATCAACGCCAC
TCACACCATCCACGGCTACAACGCAGTGTCCTCCGAAAGGTTCAGGGGCT
TGCAATCGCACATCTTCCTCGCCATCGGGGCGCGTGTGTTCACCAACAAC
AACGTTTGGGTGTCTGCCGGCCTTGCCAACGGAGCCGTCGGGGTAGGGTT
ACACATGCAGTGGGCAGAGGGCCAAACGCCGCCACACCTGCCGGAGGTCG
TGTGGGTTCGCGTGGAGAACTACCGGGGTCCTCAATACTTCGAGCAACCA
CTCCGGAGGGACTGGGGCGACGGCGAAATTGACCTCACGAACCTCTGCCC
CATCGCCCCCATGGAGGTCATGGATGATCAACCACCCACGGGTCGCCGGA
GAGATGACGGCACCTCCATCGCCCGCTGCTTCAGGATGCAGTTGCCCTTG
ATGCTCGCCTTCGGTATCACCATCCACAAAAGTCAGGGCAACATCTTGCT
ACGCTACTTCTCGGACATCGGAGCAAGCGAGAGGAGCGACGGCCGATCCT
TCACTGCCTTCGGCCGGTGCCGTACGCTGGAGAACATGCTCCTCGAGCCC
TTCTCCCCTGAGCGCTTCCTCAAA
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