mRNA_E-fasciculatus_F_contig1061.488.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1061.488.1 vs. uniprot
Match: D7FML5_ECTSI (Putative: similar to cytoplasmic dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML5_ECTSI) HSP 1 Score: 1165 bits (3013), Expect = 0.000e+0 Identity = 641/710 (90.28%), Postives = 648/710 (91.27%), Query Frame = 1
Query: 58 MADAEAVRQQRQKQLEDKRRRLDALRKXXXXXXTATKIASDAAATPQNQADGEAETATPGSPAVPGGADLDAYIKSLLSTPSPGGGAEEDGRSPPXAPGESRTTTGGSSWAGSGSDRRAVERLSSLTIVCGLGSVNVAPKSMEFYDKGCQADLGGAAGTGAHGTAGADEGGDAVGAQSQSSSSSAKRTPDKRRNHRRVFGRGGKGVPVPDGSEGEDLGYPPSGGPSLVAASSPSRPGVRQPVASTPGSRSGRWTGDGSGGMAALPMTPPATTAKPLSVDEKKEIVQTDHFQASKQSDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSASKSLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVDRCALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDEDLRLEAALAVKANGALP 2187
MADA+AVRQQRQKQLEDKRRRLDAL XXXXXX KIASDAAAT Q QADGEAE A PGSP GGADLDAYIKSLLSTP+PGGGAEEDGRSPP APG S T+TGGSSWAGS DRRA +RLSSLTIVCGLGSV+VAPKS EFYDKGCQADLGGAAGTGA GTAGADEG DAVGAQS SSSAKRTPDKRRNHRRVFGRGGKGVPVPDGSEGEDLGYPPSG PSLVAASSPSRPGVRQPVASTPGSRSGRWTGDG+GGM ALPMTPPAT AKPLSVDEKKEIVQTDHFQ DFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEG XXXXXXXXXXXXXXXXXX ESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSASK LRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVDRCALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDEDLRLEAALAVKANG +P
Sbjct: 1 MADADAVRQQRQKQLEDKRRRLDALXXXXXXXXXXXKIASDAAATAQKQADGEAENAAPGSPVATGGADLDAYIKSLLSTPAPGGGAEEDGRSPPPAPGVS-TSTGGSSWAGS--DRRAADRLSSLTIVCGLGSVDVAPKSTEFYDKGCQADLGGAAGTGAQGTAGADEGVDAVGAQS---SSSAKRTPDKRRNHRRVFGRGGKGVPVPDGSEGEDLGYPPSGAPSLVAASSPSRPGVRQPVASTPGSRSGRWTGDGTGGMTALPMTPPATAAKPLSVDEKKEIVQTDHFQ-----DFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGRVSTXXXXXXXXXXXXXXXXXXGKPVTISSMAVAQGDEQKNIVVGSESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSASKPLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVDRCALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDEDLRLEAALAVKANGTIP 699
BLAST of mRNA_E-fasciculatus_F_contig1061.488.1 vs. uniprot
Match: A0A836C896_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C896_9STRA) HSP 1 Score: 342 bits (878), Expect = 1.900e-105 Identity = 185/426 (43.43%), Postives = 254/426 (59.62%), Query Frame = 1
Query: 916 TDHFQASKQSDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSS-----SALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE------SGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSASKSLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVDRCALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDEDLRLEAAL 2160
TD F S FL+R V+ERAL E+ D+L DY+ S R +L++ + ++ WC +R++TD+ WSPH+PEL+L +Y+A G G + S+ +A DGLVLVWS+A+ RPE+ L SQSP+LTARFH FD H+++GG+YSGQVV WD RA SLPVQ+TP+S HT P++ + + GT A +L+TAST+G + SG I +H ++GV E+ GH+G+VT++D NPS +K+L+ LVLSSS+DWTTRLW L Q V T +H +YDYVCD +WSP HPALF TAN++G+L LWN+ S++ P TPP KV ALT++AWS +G RL GD G V+ + ++ ALPR DE+ RLE L
Sbjct: 54 TDSF-----SKFLKRCGTVVERALTEQATFDILKDYSKG-ATSERTHGSDQLHKLLRFYDPTWCGDRAITDVHWSPHYPELLLVAYSASGRGQNLESALLGAPAAGDAHPDGLVLVWSLALPSRPEFILYSQSPILTARFHEFDAHLVVGGSYSGQVVTWDLRATSLPVQQTPVSDAAHTRPIFGMAMEGTGAAHALVTASTDGRVAWWNPRQLLQPNEVLQLALAQSDNDASGGGLSVSCIACVPGETVQLLVGMDSGRILAVAVHTHSAGVQREFHGHFGMVTALDTNPSKAKALQELVLSSSMDWTTRLWSLRQSDKPLV-TFSHDSYDYVCDVRWSPVHPALFATANVAGDLTLWNVTASLDTPVTPPCKVSGN-ALTKLAWSREGCRLAAGDVTGAVHVYAIAEDMALPRHDEEHRLERLL 471
BLAST of mRNA_E-fasciculatus_F_contig1061.488.1 vs. uniprot
Match: F4PS77_CAVFA (Cytoplasmic dynein intermediate chain n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PS77_CAVFA) HSP 1 Score: 267 bits (682), Expect = 3.420e-75 Identity = 164/438 (37.44%), Postives = 235/438 (53.65%), Query Frame = 1
Query: 823 DGSGGMAALPMTPPATTAKPLSVDE--KKEIVQTDHFQASKQSDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALHTDADGLVLVWSMA-MQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------ESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPS-ASKSLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVDRCALTRMAWSPDGRRLCVGDAKGYARVFN 2100
D S G A+ T + + + +DE KKEI++++ F+ F RSS+V+ERAL + +D+L+DY + D + L TL ++RW + RS+TD+ WSP HPELV+ SY+A G D DG+VLVWS+ +PEY + QSPV+T F F +I+GGTYSGQ+VVWDTR+KS PVQRTPLS+ GHT+PVY++ + G+ NA +L++ ST+G E G IY H +G+ + Y GH+G +TS+D +PS S L LSSS DWTTRLW + + A V + DYV DA+WSP HP++FVT + +G++ LW+LN + P + AL R++WS DG+RL VGD+ G +++
Sbjct: 176 DSSEGHEAIEETNVSKEPEVIELDEQEKKEILESESFRT-----FFTRSSKVIERALMLDDNIDILVDYT--KTDDEDKSSSKELKLMGTLVDERWSKHRSVTDINWSPKHPELVVTSYSANETGSH---------DPDGVVLVWSVNNFYQKPEYVFNCQSPVMTTFFSRFHPTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMSVVGSTNANTLISVSTDGKLCSWNLDNLSQPVETLDLNAKNNTSSTVSATSSIAVTSLVFQETEMNAFFVGSEDGSIYQAHRHGSKTGISDRYKGHHGPITSIDFHPSRGSIDFGNLFLSSSTDWTTRLWSTNK-TEAPVYSF-EDYVDYVYDARWSPVHPSVFVTGDGNGQMCLWDLNEETDAPIVR--NKISSHALNRLSWSGDGKRLLVGDSTGQLSLYD 593
BLAST of mRNA_E-fasciculatus_F_contig1061.488.1 vs. uniprot
Match: UPI0006449257 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449257) HSP 1 Score: 261 bits (668), Expect = 3.450e-73 Identity = 162/426 (38.03%), Postives = 228/426 (53.52%), Query Frame = 1
Query: 883 LSVDEKKEIVQTDHFQASKQSDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALHTDADGLVLVWSMAMQ-HRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------ESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPS-ASKSLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVDRCALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDE 2136
LS +K I+++D F++ F RSS+V+ERAL +++D+L+DY + D + L TL ++RW + RS+TD+ WSP HPELV+ SY+ S+ A D DG+VLVWS+ +PEY + QSPV+T F F +I+GGTYSGQ+VVWDTR+KS PVQRTPLS+ GHT+PVY++ + G+ NA SL++ ST+G E G IY H +GV E + GHYG +TSVD +PS S L LSSS DWT +LW + + +YV DA+WSP P++F T + SG+L LW+LN E P +K R +L R++WS DG+RL GD+ G +++ Q A P+ D+
Sbjct: 201 LSEHDKNNILESDSFRS-----FFSRSSKVIERALYLDDSIDILVDYT--KSDEVTKSSTKELTLVGTLADERWTKHRSVTDINWSPKHPELVVTSYS---------SNEAGSHDPDGVVLVWSVNNYFQKPEYTFNCQSPVMTTFFSRFHHTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSIGHTHPVYSMSVVGSANANSLVSISTDGKLCSWSLENLSQPIETLDLNSRNNTNISTTASIAVTSLVFPESEMNSFYVGTEEGVIYQAQRHGAKAGVNERFKGHYGPITSVDFHPSRGSTDFSNLFLSSSTDWTCKLWSTNKTETPIYSFEDY--VEYVYDARWSPTAPSIFATGDGSGQLSLWDLNEETEAPIFR-IKPSSR-SLNRISWSADGKRLLAGDSAGSLYLYDSSQ-FASPQPDD 605
BLAST of mRNA_E-fasciculatus_F_contig1061.488.1 vs. uniprot
Match: A0A0G4H2R6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H2R6_VITBC) HSP 1 Score: 261 bits (667), Expect = 1.030e-72 Identity = 159/427 (37.24%), Postives = 225/427 (52.69%), Query Frame = 1
Query: 892 DEKKEIVQTDHFQASKQSDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQG-QRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSASKSLRG-----LVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVD-RCALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDEDLRLE 2151
D +K + TD +DF ++SR++ERALG + D+L+DY+G + G +G +++ T +D+W Q R +T + SP PEL +ASY R +A TD DG VLVWS+ M RPEY + QS VLTA F F H++IGGTYSG +V+WDTRAK+ P+ RTPLS+ GH +PVY++ + GT NA +L++ ST+G E G I +H GV E + GH G +T VD +P + G L+LS+S DWT RLW S C+ + + DYV DAKW P HPA+F + + G L +W+LN +E P V+V A+ + WSPDGRRL G ++G V+N+D+E P+ ++ RLE
Sbjct: 225 DRQKILTSTDF------ADFFNKTSRLVERALGAQ--FDILVDYSGVAAEEGNDMEGVEKVKRHETYRDDKWTQGRCVTSVCNSPKFPELFMASYGQR--------ENAAPTDPDGCVLVWSLPMTQRPEYVFTCQSAVLTACFDKFQPHLVIGGTYSGSIVLWDTRAKAGPIHRTPLSSRGHAHPVYSMALVGTQNAHNLISVSTDGRLCVWSLGMLVHPQEFIDFKKGNRDVSVTCMAFEEGETNVLMAGA-EDGSIVQAHIHGTKVGVTEAFEGHDGPITGVDYHPIGEAASHGADFSDLLLSTSFDWTIRLWSPKHHSQ-CLHSF-EVSEDYVYDAKWHPHHPAVFASVDGEGNLDVWDLNKDLESPH---VRVNSGESAMNHLCWSPDGRRLVSGTSEGIIAVWNVDKELTTPKPEDWARLE 629
BLAST of mRNA_E-fasciculatus_F_contig1061.488.1 vs. uniprot
Match: D3AZM5_POLPP (Cytoplasmic dynein intermediate chain n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AZM5_POLPP) HSP 1 Score: 260 bits (664), Expect = 1.480e-72 Identity = 160/424 (37.74%), Postives = 227/424 (53.54%), Query Frame = 1
Query: 895 EKKEIVQTDHFQASKQSDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALHTDADGLVLVWSMAMQ-HRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------ESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSA--SKSLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVDRCALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDE 2136
+K I+++D F++ F R+S+V+ERAL +++D+L+DY + D + L TL ++RW + RS+TD+ WSP HPELV+ SY+A G D DG+VLVW++ +PEY + QSPV+T F + +I+GGTYSGQ+VVWDTR+KS PVQRTPLS+ GHT+PVY++ + G+ NA SL++ ST+G E G IY H +GV E + HYG VTS+D +P + S L LSSS DWT RLW + + + T DYV DA+WSP +P++F T + SG+L LW+LN E P K R +L R++WS DGRRL VGD+ G +++ Q A P+ D+
Sbjct: 206 DKSNILESDSFKS-----FFSRTSKVIERALCLDDSIDILVDYT--KSDEESKSSSKELTLIGTLQDERWSKHRSVTDINWSPKHPELVVTSYSANEAGSH---------DPDGVVLVWTVNNYFQKPEYVFNCQSPVMTTFFSRYHPTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMAVVGSANANSLVSISTDGKLCSWSLDNLSQPIETLDLNSRANTATVSTTTSIAVTSLVFPETEMNTFYVGTEEGVIYQAQAHGAKAGVNERFKAHYGPVTSIDFHPPSRNSSEFSNLFLSSSTDWTCRLWSSSKPDQP-IYSFEDYT-DYVFDARWSPVNPSIFATGDGSGQLALWDLNEETEAPIFR-AKTSSR-SLNRLSWSADGRRLLVGDSGGQLSLYDSSQ-FASPQVDD 608
BLAST of mRNA_E-fasciculatus_F_contig1061.488.1 vs. uniprot
Match: A0A0D2WJ75_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WJ75_CAPO3) HSP 1 Score: 258 bits (660), Expect = 4.980e-72 Identity = 153/431 (35.50%), Postives = 230/431 (53.36%), Query Frame = 1
Query: 883 LSVDEKKEIVQTDHFQASKQSDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQG--QRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSAS--KSLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVDRCALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDEDLRLEAALA 2163
LS D++ IV++D F F RSSR++ERAL + + DV +DY+G D G +R++ ++RW R++T +QWSP HPEL+ A G+G++ SS D DG+VL+W++ + RPE + QS V++ F ++I+GGTYSG +V+WDTRAK+ PVQRTPL++ HT+PVY L + GT NA +L++ ST+G E G + H R +GV +GH+G VT+V ++P+ + + L++SSS+DW+ +LW S + + + DY+ DA+WSP HPA+F T + + L LWNLN +E P + AL R+ WS DG ++ VGDA G V+N+ ++ A PR DE L + LA
Sbjct: 197 LSEDDRSAIVKSDRF-----LQFFDRSSRLVERALND--SYDVTVDYSGGAQTDSDSDAGASERVSINTKFVDERWSVHRAITSMQWSPKHPELL-----AVGYGINPASSQ----DPDGVVLLWNLHLPQRPELVFTCQSAVMSVCLSKFHPNLIVGGTYSGSIVLWDTRAKTTPVQRTPLTSACHTHPVYCLEMVGTQNAHNLISVSTDGRMCAWSMDMFAQPQTKSEPRHERLPILAATALAFPEDEIAHFIVGGEDGTVGLGSRHGRQAGVHSTLAGHHGPVTAVHSHPTINNYRDFNDLIISSSMDWSVKLW--SSKSRTPIHSF-EASGDYIYDAQWSPVHPAVFATVDGASRLDLWNLNGDIEVPAVSTTIDANGAALNRLRWSADGSKVAVGDADGTVHVYNIGEKFAQPRADETSILRSTLA 608
BLAST of mRNA_E-fasciculatus_F_contig1061.488.1 vs. uniprot
Match: A0A2R5G024_9STRA (Cytoplasmic dynein 1 intermediate chain 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G024_9STRA) HSP 1 Score: 258 bits (660), Expect = 7.160e-72 Identity = 153/418 (36.60%), Postives = 229/418 (54.78%), Query Frame = 1
Query: 943 SDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTAR--GHGLDATSSSALHTDADGLVLVWSMAMQ-HRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSASKSLRGLVLSSSVDWTTRLW--RLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEP---FTPPVKVVDR---CALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDEDLRLEAALA 2163
++FL +S RV+ERA+ + D+ +DY G E S + +R+ + ++ ++RW + R++TD+QWSPHH EL LA+YT R LD ++ D G+VL+WS M RPEY + SPV A FHP+ +++IGGTYSGQ+V+WD RAKS+PVQR+ LS HT+PVY++ + G+ NA +L++ ST+G E G ++ +H +GV + H+G VT + + S + L+LS+S+DWT +LW R G AC + G+ DYV D KWSP HP++F T N +G L +WN+N +E P F P+ + AL + W+P GR++ GDA+G VF++ + A PR DE RLE ++A
Sbjct: 241 TNFLNQSVRVVERAMKQNSLFDITIDYGGLE--SNGQSEAERITLSESISDERWSRGRTVTDIQWSPHHKELFLAAYTKRMVSSELDWARGAS---DPSGVVLIWSTHMSSERPEYVFTCPSPVHAACFHPYSANLVIGGTYSGQIVLWDMRAKSVPVQRSLLSPESHTHPVYSMTVTGSANAHNLVSVSTDGRLCVWNLANISAPTDSRQLKYNKKDVTATSLAFADGETNELFVGA-EDGRLFRAQVHGTKAGVQSQTEAHFGPVTKMHFHKGTSATAD-LMLSASMDWTVKLWSHRSGDKPLACFE----GSEDYVFDVKWSPVHPSVFATVNGAGMLDVWNINVDLEVPQARFKVPLPAGAQGATAALASLQWAPSGRKVLAGDARGNIHVFDLAADLANPRRDEWARLETSVA 647
BLAST of mRNA_E-fasciculatus_F_contig1061.488.1 vs. uniprot
Match: A0A8C4Q2E0_EPTBU (Dynein cytoplasmic 1 intermediate chain 2 n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4Q2E0_EPTBU) HSP 1 Score: 253 bits (645), Expect = 6.070e-70 Identity = 153/423 (36.17%), Postives = 221/423 (52.25%), Query Frame = 1
Query: 883 LSVDEKKEIVQTDHFQASKQSDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGD--QGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALHTDADGLVLVWSMAMQHR-PEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRA-KSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSA-SKSLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVDRCALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDE 2136
LS +EK++++ +D F F RS+R++ERAL E D+ LDY+G D G+ G +L+ ++ W + R +T L WSP HPEL++ SYT ++ A + DG+ L+W+M + PEY QSPVL+A F F ++++GGTYSGQ+V+WD R K PVQRTPLSA HT+PVY + + GT NA +L++ ST+G E G +YT H +G+ E + GH G VT + + +A S L +SSS DWT +LW SN + + + DY+ D WSP HPALF + G L LWNLN E P T V + AL R+ W+ GR L VGDA+G+ ++++ ++ A+PR+DE
Sbjct: 203 LSEEEKQQVMHSDEFLF-----FFDRSTRIIERALAED--TDIFLDYSGRNTDEKEGEILAGTKLSLQRHFFDEHWTKHRVVTFLDWSPQHPELLVTSYT---------NNEAAPHEPDGVALIWNMKFKKSTPEYIFHCQSPVLSACFAHFHPNLVVGGTYSGQIVLWDNRTNKRTPVQRTPLSALAHTHPVYCVSVVGTQNANNLISISTDGKMCSWSLDMLSQPQDSMELFHRQAKTVAVTCMAFPLGDVNNFVVGSEEGAVYTASRHGSKAGISEAFEGHQGPVTGLSCHTAAGSLDFSHLFVSSSFDWTVKLW--STKSNKPLYSFEDNS-DYIYDVAWSPCHPALFACVDGMGRLDLWNLNSDTEVP-TASVVLDGAPALNRVRWAQSGRELAVGDAEGHVWIYDVGEQVAVPRSDE 605
BLAST of mRNA_E-fasciculatus_F_contig1061.488.1 vs. uniprot
Match: A0A7D9H7N6_9COLE (Cytoplasmic dynein 1 intermediate chain, DH IC (Fragment) n=2 Tax=Polyphaga TaxID=41084 RepID=A0A7D9H7N6_9COLE) HSP 1 Score: 248 bits (633), Expect = 8.400e-70 Identity = 149/422 (35.31%), Postives = 216/422 (51.18%), Query Frame = 1
Query: 883 LSVDEKKEIVQTDHFQASKQSDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQG-QRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALHTDADGLVLVWSMAMQHR-PEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRA-KSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANP-SASKSLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVDRCALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDE 2136
LS +EK+ I+ ++ FQ F+ R+ R++ERALGE +D+ DY+G GD G ++ QR++ +++RW + R +T L WSP +PEL+LASY ++ D DG+ L+W+ + PEY QS V+T +F F ++++GGTYSGQ+V+WD R K P+QRTPLSA+ HT+PVY +H+ GT NA +L++ ST+G E G ++ H +G+ + Y GH G VT + N + L+SS+DWT +LW L + + +G DYV D WSP HPALF + G L LWNLN E P V V AL R++W+P G L VGD G V+++ + A PR DE
Sbjct: 66 LSEEEKQMIILSEDFQR-----FVDRTGRIMERALGE--TVDIYADYSGIGGDEGLDEKSHQRISLNRWFYDERWAKNRCVTSLDWSPQYPELLLASYN---------NNDESPNDPDGVALIWNTKFKKTTPEYIFHCQSAVMTTKFAKFHPNLVLGGTYSGQIVLWDNRVQKRTPIQRTPLSASAHTHPVYCMHVVGTQNAHNLISISTDGRLCSWSLDMLSQPQETMELQRSQSRSVAVTCLDFPHSDVNNFVVGSEEGAAFSACRHGAKAGITDTYDGHQGPVTGISVNAVQGGIDFSHMFLTSSIDWTIKLWSL-KDTKPVYSFEDNG--DYVLDVAWSPMHPALFAAVDGGGRLDLWNLNQDTEVPAAG-VTVEGNPALNRVSWTPSGLHLTVGDNSGKLWVYDVAENFAHPRHDE 467 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1061.488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1061.488.1 >prot_E-fasciculatus_F_contig1061.488.1 ID=prot_E-fasciculatus_F_contig1061.488.1|Name=mRNA_E-fasciculatus_F_contig1061.488.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=711bp MADAEAVRQQRQKQLEDKRRRLDALRKRKKEKETATKIASDAAATPQNQAback to top mRNA from alignment at E-fasciculatus_F_contig1061:1599..12108+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1061.488.1 ID=mRNA_E-fasciculatus_F_contig1061.488.1|Name=mRNA_E-fasciculatus_F_contig1061.488.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=10510bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1061:1599..12108+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1061:1599..12108+ >mRNA_E-fasciculatus_F_contig1061.488.1 ID=mRNA_E-fasciculatus_F_contig1061.488.1|Name=mRNA_E-fasciculatus_F_contig1061.488.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4266bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1061:1599..12108+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |