mRNA_E-fasciculatus_F_contig10583.464.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10583.464.1
Unique NamemRNA_E-fasciculatus_F_contig10583.464.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig10583.464.1 vs. uniprot
Match: D7FVV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV7_ECTSI)

HSP 1 Score: 646 bits (1666), Expect = 9.030e-213
Identity = 488/539 (90.54%), Postives = 502/539 (93.14%), Query Frame = 1
Query:   16 QENGYREEMTRVLAVVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPDGFLDSLVKLCTKEGAPSEAAAAVRALAALSSRPDTQAGEAARFSALDALRETAAAAAXXXXXXXXXXXXXARAPGKKAR-GEVGATEVTALAAFAREFPREFERHEGKALSFAMARMSGAIGVGEGREEKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSPACLTLCASIKLACNCLMAPGRAADGGRDGAAEDRGEAWLRTVFALLKAEGQPESEGEGEMGEAERAELRLAGSTRVMRLCVNSANVQTLLTPDRWHSLAWTLMDPSAKVRLGFIREVCRGLEQTGAAGERGPSTLRFMAYLCLTAFESEPIKKKATLAIANNVRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLERSMPEYVLPYAIHLLAYHPDFP---NDKQRIKNVEKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQV 1620
            +ENGYREEMTRVLAVVA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ELPDGFLDSLVKLCTK+GAPSEAAAAVRALAAL+SRPDTQAGEAARFSALDALRETA    XXXXXXXXXXXXX  APGKK R G VGATEVTALAAFAREFPREFERHEGKALSFAMARMSGAIGVGEGRE++       XXXXXXXXXXXXXXXXXXX     VSPACLTLCASIKLACNCLMAPGRA D    G AEDRGEAWL TVFALLKA+GQPES+GE EMGEAERAELRLAGSTRV+RLCVNSANVQTLLTP RWHSLAWTLMDPSAKVRLGF+REVCRGLEQTGAAGERGPSTLRFMAYLCL AFESEPI+KKATLA+ANNVRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA LERSMPEYVLPYAIHLLAYHPDFP   +DKQRIKN+EKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQ+
Sbjct:  756 EENGYREEMTRVLAVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ELPDGFLDSLVKLCTKDGAPSEAAAAVRALAALASRPDTQAGEAARFSALDALRETA----XXXXXXXXXXXXXXXAPGKKCRDGGVGATEVTALAAFAREFPREFERHEGKALSFAMARMSGAIGVGEGREDE-------XXXXXXXXXXXXXXXXXXXAAATAVSPACLTLCASIKLACNCLMAPGRATD--VSGGAEDRGEAWLSTVFALLKADGQPESDGEREMGEAERAELRLAGSTRVVRLCVNSANVQTLLTPHRWHSLAWTLMDPSAKVRLGFMREVCRGLEQTGAAGERGPSTLRFMAYLCLMAFESEPIRKKATLAVANNVRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-LERSMPEYVLPYAIHLLAYHPDFPAHKDDKQRIKNLEKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQL 1279          
BLAST of mRNA_E-fasciculatus_F_contig10583.464.1 vs. uniprot
Match: A0A6H5KWB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWB1_9PHAE)

HSP 1 Score: 571 bits (1471), Expect = 2.020e-184
Identity = 438/544 (80.51%), Postives = 452/544 (83.09%), Query Frame = 1
Query:   16 QENGYREEMTRVLAVVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPDGFLDSLVKLCTKEGAPSEAAAAVRALAALSSRPDTQAGEAARFSALDALRETAAAAAXXXXXXXXXXXXXARAPGKKARGEVGATEVTALAAFAREFPREFERHEGKALSFAMARMSGAIGVGEGREEKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSPACLTLCASIKLACNCLMAPGRAADGGRDGAAEDRGEAWLRTVFALLKAEGQPESEGEGEMGEAERAELRLAGSTRVMRLCVNSANVQTLLTPDRWHSLAWTLMDPSAKVRLGFIREVCRGLEQTGAAGERGPSTLRFMAYLCLTAFESEPIKKKATLAIANNVRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-GLERSMPEYVLPYAIHLLAYHPDFP--------NDKQRIKNVEKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQV 1620
            +ENGYREEMTRVLAV+AA                XXXXXXXXXXXXXXXXXXXXXXELPDGFLDSLVKLCTKEGAPSEAAAAVRAL                               XXXXXXXXXXXXX         G VGATEVTALAAFAREFPREFER+EGKALSFAMARMSG IGVGEGR++        XXXXXXXXXXXXXXXXXXXXX   VSPACLTLCASIKLACNCLMAPGRA D    G AE  GEAWLRTVFALLKA+GQPESEGE EMGEAERAELRLAGSTR+MRLCVNSANVQTLLTP RWHSLAWTLMDPSAKVRLGF+REVCRGLEQTG AGERGPSTLRFMAYLCLTAFE EPI+KKATLA+ANN+RQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LERSMPEYVLPYAIHLLAYHPDFP        +DKQRIKN+EKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQ+
Sbjct:  617 EENGYREEMTRVLAVLAACRRPPGEAEDVGMGGKXXXXXXXXXXXXXXXXXXXXXXELPDGFLDSLVKLCTKEGAPSEAAAAVRALXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXCRSGGVGATEVTALAAFAREFPREFERYEGKALSFAMARMSGTIGVGEGRDDX-------XXXXXXXXXXXXXXXXXXXXXATAVSPACLTLCASIKLACNCLMAPGRATD--VSGGAEGTGEAWLRTVFALLKADGQPESEGEREMGEAERAELRLAGSTRIMRLCVNSANVQTLLTPHRWHSLAWTLMDPSAKVRLGFMREVCRGLEQTGVAGERGPSTLRFMAYLCLTAFEPEPIRKKATLAVANNIRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALERSMPEYVLPYAIHLLAYHPDFPVHKARGNFDDKQRIKNMEKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQL 1148          
BLAST of mRNA_E-fasciculatus_F_contig10583.464.1 vs. uniprot
Match: W7TFJ9_9STRA (Sister chromatid cohesion protein pds5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFJ9_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.370e-19
Identity = 84/295 (28.47%), Postives = 129/295 (43.73%), Query Frame = 1
Query:  799 LRTVFALLKAEGQPESEGEGEMGEAERAELRLAGSTRVMRLCVNSANVQTLLTPDRWHSLAWTLMDPSAKVRLG-FIREVCRGLEQTGAAGERGPSTLRFMAYLCLTAFESE-PIKKKATLAIANNVRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLERSMPEYVLPYAIHLLAYHPDFP---NDKQRIKNVEKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDAL-----------------DPSNNRIHLTARIARQ 1617
            L  +F +LKAEG+  S  E  + + ++A LR+  +  +++L  N      LL   RW SLAW ++DP      G F R++ R +  +          L+F+A L L A E +   +++A  A+   V+ LR A++   A                                                 MPEY+LPY +HLLA+ PDFP   +D  R + +++ L F++EPL+       EADN+S LL M DTI T Y+DA                  D +  R+H   R+ R+
Sbjct:  978 LDLLFKILKAEGRLPSRVE--LSKKDKARLRIVSAGGILKLMRNQYVQHRLLDAPRWRSLAWIMLDPEEITVAGAFTRKLARAVRSSRVH-------LKFLALLSLAALEEDVAARREARQAVTRAVQNLRQAYEEYMAGQEEEPSEEAKRKVTTS-------------------------------MMPEYLLPYLLHLLAHFPDFPTSPHDSVRWRPIQRCLAFVLEPLMAT--LGTEADNLSFLLLMTDTILTRYKDASAAIKRQEKEKNSLINEDDVATERLHQVTRVCRE 1230          
BLAST of mRNA_E-fasciculatus_F_contig10583.464.1 vs. uniprot
Match: A0A836C8V2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8V2_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 7.120e-18
Identity = 98/311 (31.51%), Postives = 143/311 (45.98%), Query Frame = 1
Query:  772 AAEDRGEAWLRTVFALLKAEGQPESEGEGEMGEAERAELRLAGSTRVMRLCVNSANVQTLLTPDRWHSLAWTLMDPSAKVRLGFIREVCRGLEQTGAAGERGPSTLRFMAYLCLTAFESEPIKKKATLAIANNVRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLERSMPEYVLPYAIHLLAYHPDFPNDKQR---IKNVEKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITT---------------------------SYRDALDPSNNRIHLTARIAR 1614
            A ++R    L  + A L   G P   G   + +  +AE+RLA +T ++ L   S ++Q LL+  RWH+LA+TL D  A VR  F +E+ R +    A       T R+ A LCL   E E  +++A  A+A  +R +R  H   +A    XXXXXXXXXX                               L   +PEYVLP A+H+LA+ P   N  +       ++K L FL++ L+      G+ADN+S LLQM++TI T                           SY DA+ P + ++H+ A  AR
Sbjct: 1066 AVKERAAKLLGLLLAALDDGGAPP--GWTTLDDESKAEVRLAAATCILELMCRS-HLQPLLSAQRWHTLAYTLCDEDASVRERFAQELARAVNNRMA-------THRYAAMLCLVGAEPEAARREARAALAAWLRHMRSHHAAQSAAAKSXXXXXXXXXXERE---------------------------ALSVLLPEYVLPCALHMLAHLPGLGNLAEEGPGAHKMQKCLAFLLQCLMEGQDCGGDADNLSFLLQMINTIRTRLVXXXXXXXXXXXXXXXXXXXXXXXXSYCDAMAPDSGQLHVVADAAR 1339          
BLAST of mRNA_E-fasciculatus_F_contig10583.464.1 vs. uniprot
Match: A0A7S2ANZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ANZ9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.900e-16
Identity = 70/243 (28.81%), Postives = 106/243 (43.62%), Query Frame = 1
Query:  874 ERAELRLAGSTRVMRLCVNSANVQTLLTPDRWHSLAWTLMDPSAKVRLGFIREVCRGLEQTGAAGERGPSTLRFMAYLCLTAFESEPIKKKATL-AIANNVRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLERSMPEYVLPYAIHLLAYHPDFP---NDKQRIKNVEKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRI 1590
            ++ ELR   +  +++L  N    Q L T +RWH LA    D  AKVR  F  ++ R + +           LR MAYLC TA E++P  KKA   AI +   ++R    R  +                                                 MPEYV+PY +HL+ +HPDFP   +D +R+    +YL ++++PL+ +     EADN+S LLQ+LD I     D      +++
Sbjct:  127 DQTELRRVSACSILKLMRNHDIGQQLST-ERWHKLARVTQDSDAKVRQTFCGKLGRSVMELAVP-------LRIMAYLCFTATETDPKSKKAMQQAIRHATERMRWNLDREQSILDDASNSTPRFGKGIARQDTQAAKKLATTL------------------MPEYVVPYVVHLVVHHPDFPKDISDARRLGQCRRYLEWILDPLVSS--LGSEADNVSFLLQLLDKIAMRSGDQRSSEGDKL 341          
BLAST of mRNA_E-fasciculatus_F_contig10583.464.1 vs. uniprot
Match: F0WCP2_9STRA (Sister chromatid cohesion protein PDS5 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WCP2_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.050e-11
Identity = 69/275 (25.09%), Postives = 118/275 (42.91%), Query Frame = 1
Query:  760 GRDGAAEDRGEAWLRTVFALLKAEGQPESEGEGEMGEAERAELRLAGSTRVMRLCVNSANVQTLLTPDRWHSLAWTLMDPSAKVRLGFIREVCRGLEQTGAAGERGPSTLRFMAYLCLTAFESE-PIKKKATLAIANNVRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLERSMPEYVLPYAIHLLAYHPDFP-----NDKQRIKNVEK----------YLNFLIEPLIGAGRQTGEADNMSMLLQML 1536
            G DG    R    L  +F +L+++G+  +     M     +  RL  ST +++L  N A ++ LLT   WH L + + D S  VR  F++++   L +        P   ++++YL L A ES   +KK+A + ++  ++++R   + A +                                                 +PEY LPY IH+LA+HPDFP     +  QR +N             YLNF ++ L+ +     ++DN++ LLQ+L
Sbjct: 1009 GTDGDGYGRERILLDLLFDILRSDGKIWTNTPSLM-----SRCRLIASTTLLKLMSN-ARIEALLTVSEWHVLGFVMQDSSTDVRAAFLKKLTAHLMKKSV-----PHPHKYLSYLALAATESNMSLKKQAKILLSTAIKRMRQMFEAAASQCRSIDDDEIDAIQNKNALI-----------------------------VPEYALPYVIHVLAHHPDFPPRAAVSLSQRSRNGPNRSDIWVNQITYLNFFLDGLVSSSNAR-DSDNIAFLLQIL 1242          
BLAST of mRNA_E-fasciculatus_F_contig10583.464.1 vs. uniprot
Match: A0A5D6XI70_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI70_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.420e-11
Identity = 74/292 (25.34%), Postives = 125/292 (42.81%), Query Frame = 1
Query:  778 EDRGEAWLRTVFALLKAEGQPESEGEGEMGEAERAELRLAGSTRVMRLCVNSANVQTLLTPDRWHSLAWTLMDPSAKVRLGFIREVCRGLEQTGAAGERGPSTLRFMAYLCLTAFESEP-IKKKATLAIANNVRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLERS---MPEYVLPYAIHLLAYHPDFPNDKQRIKNVEK--------------------YLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSN 1581
            E R +  +  +F LL+++G+  +        +   + R+  S  ++RL +  A+V+ LL+  +WH L + L D S +VR  F+R +   L +        P   ++++YL L A ES   +KK+A   +   V+++R   + + A                                           A  + S   +PEY LPYAIHLLA+HPDFP +  +   V                      +L+F ++ L+ A   + +ADN++ LLQML  +     D  DPS+
Sbjct: 1014 EARSQQVVELLFDLLRSDGRTWTSNA-----SVAVKYRVVASGSLLRL-MRDASVERLLSVSQWHLLGFVLQDSSEEVRASFLRRLTSHLTKHAT-----PHPHKYVSYLVLAASESSAALKKRARSLLGVAVQRMRRVFEASLARG-----------------------------------------ASADTSALMVPEYALPYAIHLLAHHPDFPREAAQRSTVTSSSTNSHASLFHDPAWSSQMLHLSFFLDGLVPASA-SADADNVAFLLQMLAKLA-ECDDVADPSS 1251          
BLAST of mRNA_E-fasciculatus_F_contig10583.464.1 vs. uniprot
Match: A0A024G929_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G929_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 5.550e-11
Identity = 70/292 (23.97%), Postives = 128/292 (43.84%), Query Frame = 1
Query:  766 DGAAEDRGEAWLRTVFALLKAEGQPESEGEGEMGEAERAELRLAGSTRVMRLCVNSANVQTLLTPDRWHSLAWTLMDPSAKVRLGFIREVCRGLEQTGAAGERGPSTLRFMAYLCLTAFESEP-IKKKATLAIANNVRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLERSMPEYVLPYAIHLLAYHPDFP-----NDKQRIKN--------VEK--YLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIH 1593
            DG   DR    L  +F +L+++G+  +     M     ++ R+  ST +++L ++S  ++ LL+   WH L + + D S+ VR  F++++   L +        P   ++++YL L A ES   +KK+A + ++  V+++R   + A +                                                 +PEY LPY IHLLA+HPDFP     +  +R K+        +++  YLNF ++ L+ A     + DN++ LLQ+   ++    D   P    +H
Sbjct: 1013 DGCGRDR--ILLDLLFEILRSDGKIWTNTPSLM-----SKCRMVASTTILKL-MSSTRIEALLSVSEWHILGFVMQDSSSDVRAAFLKKLTAHLMKKSV-----PHPHKYLSYLALAATESNMNLKKQAKILLSTAVKRMRQMFEAAASQCQSIDEGGIDAVQNKNALI-----------------------------VPEYALPYVIHLLAHHPDFPPLPATSPSRRCKSGPHRSAVWIDQMIYLNFFLDGLV-ASSNARDTDNIAFLLQISVKLSGCV-DVTTPECGNVH 1260          
BLAST of mRNA_E-fasciculatus_F_contig10583.464.1 vs. uniprot
Match: D0NH43_PHYIT (Sister chromatid cohesion protein PDS5 n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NH43_PHYIT)

HSP 1 Score: 75.9 bits (185), Expect = 1.230e-10
Identity = 79/314 (25.16%), Postives = 133/314 (42.36%), Query Frame = 1
Query:  700 CASIKLACNCLM---APGRAADGGRDGAAEDRGEAWLRTVFALLKAEGQPESEGEGEMGEAERAELRLAGSTRVMRLCVNSANVQTLLTPDRWHSLAWTLMDPSAKVRLGFIREVCRGLEQTGAAGERGPSTLRFMAYLCLTAFESEP-IKKKATLAIANNVRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLERSMPEYVLPYAIHLLAYHPDFPNDK-QRIKNVE-----------KYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIH 1593
            CA++K+A N L+   +P          A +      ++ +F +L ++G+  +        A+ A LR   S  +M++ V +  ++  L+   WH+L WTL D S  VR  F++++   L +       G    ++++YL L A ++ P +KK A   +   V ++R     A++                                           A L   +PEY LPY IHLLA+HP FP    +R   VE            YL+F ++ L+        ADN++ LLQML  ++  + D   PS+  I+
Sbjct:  956 CAAVKVAVNLLVYCWSP----------AFQQEASTLIQLLFGVLHSDGKTFASTP-----AQTAALRATASCGLMKI-VRNRQLEASLSLSEWHTLGWTLQDSSEDVRRKFLKKLTSHLVK-----HLGQHPHKYLSYLALAATDASPSVKKSAKSLLKLAVERMRHLFDAASSRDSTSNPGRM---------------------------------AAL--MVPEYALPYVIHLLAHHPSFPVKLVERTSTVEVLSSALWADQLAYLSFFLDGLVATN--AAAADNIAFLLQMLTKLSQCH-DVAAPSDINIY 1210          
BLAST of mRNA_E-fasciculatus_F_contig10583.464.1 vs. uniprot
Match: A0A7S3XUA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUA2_HETAK)

HSP 1 Score: 71.2 bits (173), Expect = 1.590e-9
Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 1
Query: 1345 LERSMPEYVLPYAIHLLAYHPDFPN-----DKQRIKNVEKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQV 1620
            L  SMPEY++PY IHLLA+ PD        D    K +E+ L   +EPL+ +     +ADN++ LLQ++ TI T+Y DA+ P +  IH  A +A+ +
Sbjct:    7 LRSSMPEYMVPYVIHLLAHRPDCSRAAGGGDPAAAKRLERCLASALEPLVHS--LGADADNLAFLLQIVSTIQTNYLDAVQPKSPGIHKIANMAQSI 101          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10583.464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVV7_ECTSI9.030e-21390.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWB1_9PHAE2.020e-18480.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TFJ9_9STRA5.370e-1928.47Sister chromatid cohesion protein pds5 n=2 Tax=Mon... [more]
A0A836C8V2_9STRA7.120e-1831.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2ANZ9_9STRA2.900e-1628.81Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
F0WCP2_9STRA1.050e-1125.09Sister chromatid cohesion protein PDS5 putative n=... [more]
A0A5D6XI70_9STRA2.420e-1125.34Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A024G929_9STRA5.550e-1123.97Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
D0NH43_PHYIT1.230e-1025.16Sister chromatid cohesion protein PDS5 n=3 Tax=Phy... [more]
A0A7S3XUA2_HETAK1.590e-940.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10583contigE-fasciculatus_F_contig10583:307..4210 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score652.1
Seed ortholog evalue2.2e-184
Seed eggNOG ortholog2880.D7FVV7
KEGG koko:K11267
EggNOG free text desc.mitotic sister chromatid cohesion
EggNOG OGsKOG1525@1,KOG1525@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Exons5
Model size1620
Cds size1620
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10583.464.1prot_E-fasciculatus_F_contig10583.464.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10583 307..4210 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927555.9651995-CDS-E-fasciculatus_F_contig10583:306..5131622927555.9651995-CDS-E-fasciculatus_F_contig10583:306..513Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10583 307..513 +
1695995593.715399-CDS-E-fasciculatus_F_contig10583:306..5131695995593.715399-CDS-E-fasciculatus_F_contig10583:306..513Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10583 307..513 +
1622927555.9752097-CDS-E-fasciculatus_F_contig10583:1338..20761622927555.9752097-CDS-E-fasciculatus_F_contig10583:1338..2076Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10583 1339..2076 +
1695995593.7339528-CDS-E-fasciculatus_F_contig10583:1338..20761695995593.7339528-CDS-E-fasciculatus_F_contig10583:1338..2076Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10583 1339..2076 +
1622927555.9874203-CDS-E-fasciculatus_F_contig10583:2448..26281622927555.9874203-CDS-E-fasciculatus_F_contig10583:2448..2628Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10583 2449..2628 +
1695995593.7436109-CDS-E-fasciculatus_F_contig10583:2448..26281695995593.7436109-CDS-E-fasciculatus_F_contig10583:2448..2628Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10583 2449..2628 +
1622927555.9998686-CDS-E-fasciculatus_F_contig10583:3330..36211622927555.9998686-CDS-E-fasciculatus_F_contig10583:3330..3621Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10583 3331..3621 +
1695995593.7512884-CDS-E-fasciculatus_F_contig10583:3330..36211695995593.7512884-CDS-E-fasciculatus_F_contig10583:3330..3621Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10583 3331..3621 +
1622927556.009977-CDS-E-fasciculatus_F_contig10583:4006..42101622927556.009977-CDS-E-fasciculatus_F_contig10583:4006..4210Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10583 4007..4210 +
1695995593.759419-CDS-E-fasciculatus_F_contig10583:4006..42101695995593.759419-CDS-E-fasciculatus_F_contig10583:4006..4210Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10583 4007..4210 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10583.464.1

>prot_E-fasciculatus_F_contig10583.464.1 ID=prot_E-fasciculatus_F_contig10583.464.1|Name=mRNA_E-fasciculatus_F_contig10583.464.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=540bp
MYVRWQENGYREEMTRVLAVVAACRRPPDEAEDDGMGGGKKKGGGDGEGE
EEERGEEDDDDELPDGFLDSLVKLCTKEGAPSEAAAAVRALAALSSRPDT
QAGEAARFSALDALRETAAAAAAAAAAAAAAAAGGARAPGKKARGEVGAT
EVTALAAFAREFPREFERHEGKALSFAMARMSGAIGVGEGREEKGEEEEG
AKKGTKKKKKRSGNGKGAAAAAAAAVSPACLTLCASIKLACNCLMAPGRA
ADGGRDGAAEDRGEAWLRTVFALLKAEGQPESEGEGEMGEAERAELRLAG
STRVMRLCVNSANVQTLLTPDRWHSLAWTLMDPSAKVRLGFIREVCRGLE
QTGAAGERGPSTLRFMAYLCLTAFESEPIKKKATLAIANNVRQLRLAHQR
ATAAAAAAAAAAATAAAGHDDDDDAGSEGGGGGSPVSTKQSSAAAAAGLE
RSMPEYVLPYAIHLLAYHPDFPNDKQRIKNVEKYLNFLIEPLIGAGRQTG
EADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQV
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mRNA from alignment at E-fasciculatus_F_contig10583:307..4210+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10583.464.1 ID=mRNA_E-fasciculatus_F_contig10583.464.1|Name=mRNA_E-fasciculatus_F_contig10583.464.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3904bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10583:307..4210+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTACGTACGTTGGCAGGAAAACGGTTACCGGGAGGAGATGACGAGGGT GCTCGCCGTCGTGGCCGCTTGCCGCCGCCCTCCGGACGAGGCAGAAGACG ACGGCATGGGGGGAGGGAAGAAGAAGGGCGGGGGAGACGGGGAGGGGGAG GAGGAGGAGAGGGGCGAGGAGGACGATGACGACGAGCTGCCGGACGGGTT CTTGGATGTAAGTACTTGTGGGATTTTTTCTGTTTTTTTTCAGCCGGTAC TGTTTTGGTTCCTGAAGAACAAGGCCGGTATGTATGACACGGATGGGATG TTTAAGTTGTCTCACTCTCTACATGGTTGCCGGGTGCCCGGTACACGACC TGACCGGCCGTACCCCTTGGCACTACGCGACCAAATGCAAGGACCTCCCT GCTACTCTGTATGGTAAAAAACAACTGTAAACAGATATTGGCTTATCTTT TCTAAGGTCCCGGTTTGTTGTCGTGCTCGCCGCCGGTCTACACGTACGCG CTCTATACCAACAACAGAAAGTGTGTTTGTTGGTCGAGGAAGGAGGTATG TATAGTCCATCGGACAGAGCAAGCCGGGTGGGGGCGGAGAGGAGGAGGAA GGCAGCCCACCTTCCTTCAAAGCGGATCGTTCGAGAAGTACCCACATCTT TCTCAGCCTGCTTGTTTCTAACCCCACTGATAGCGACTTTTTGCTGTGGA CAGCGCCGAGCGTATTGTATTCCTGGCGTGAGAAAAAGTAAGGTGTAAGG TAGGGGAGAGTAAAAGCGCTACATTATCGGTACCGTACCCATGTGCGAGA TAACCGGTGAGTAGTGGCTCCACAAACACGTCAAGGCACATTTCGTGTGG TTTCACAACAAAAGCTATATACTCCATTGCCAAGTACAGGAGGGAAAACA TTTTTGAGGCACCTTTCGGCAACGTAGATTTGCCCATCGGTGATCGGTCC TGTAACTCTAACCCTCCGTCCTCTCGGTTGATTTTGGTAAATACATATCA TTAACCTCTACCCCCCCGCCCCCACCCTTCAGAGCCTGGTGAAGCTCTGT ACGAAGGAAGGCGCTCCGTCAGAAGCAGCGGCAGCCGTCCGCGCCCTCGC CGCCCTCTCCTCCCGGCCGGACACCCAGGCCGGCGAGGCCGCCAGGTTCT CTGCCCTCGATGCCCTCCGCGAGACAGCTGCTGCCGCTGCTGCTGCTGCT GCTGCTGCTGCTGCTGCTGCTGCTGGGGGGGCGCGCGCTCCCGGCAAGAA GGCTAGGGGTGAGGTGGGGGCGACGGAGGTTACGGCGCTAGCGGCGTTCG CGCGAGAGTTCCCGCGGGAGTTCGAGAGGCACGAAGGAAAGGCGTTGTCG TTCGCGATGGCGAGGATGTCGGGGGCGATCGGGGTCGGAGAAGGAAGAGA GGAGAAGGGGGAGGAGGAGGAGGGTGCCAAGAAGGGTACCAAGAAGAAGA AGAAGCGTAGCGGTAACGGCAAAGGAGCGGCGGCGGCGGCGGCGGCGGCA GTGTCGCCAGCTTGTCTCACGCTCTGCGCCTCGATAAAGCTCGCGTGCAA CTGCCTCATGGCGCCAGGTCGGGCCGCCGACGGTGGCCGAGACGGTGCGG CGGAAGACAGGGGAGAGGCGTGGCTGAGGACAGTGTTTGCGCTGCTCAAG GCGGAGGGGCAGCCGGAGAGTGAGGGCGAGGGGGAGATGGGGGAGGCGGA GCGGGCGGAGCTGAGGCTGGCGGGATCGACCCGTGTCATGCGGCTCTGCG TCAACAGCGCCAACGTGCAGGTGTGAAGAAAGAGGGGGTTGTGCTCTCTC GATGGTGTTTTGGGGTCCTGTGGTGGGTATGGTGTTTCGCTGTTGTTTTT TTGTTGCACTTGTTATGCTGTATGGTGGTGGTGTTTTGCTGGTTTGCTGT TCTTGCGATGGTATTTTGGGGTCCTGTGGTTCTTTGTGGTAGTGGTGGAT GCGATGTATTGCTGGTTCCTTGTTGTTTCATGGCGCCGGTTCCGGTCATG CTGTGTGGTGGTGGTGTATTCTTGTTTTTGGATGTTGGATGGCACTGGCA CCAGAATGGAGTGACGATTTATCGAGTTAGCCCCGCCGCTCACGCCCACC CCCCCTCTCCTTGCCTTGATGCGATTGTCCAAACCTCTTCAGACCCTGCT CACCCCTGATCGGTGGCACTCGCTGGCGTGGACGCTGATGGACCCGTCCG CGAAAGTGAGGCTCGGTTTCATCCGCGAGGTGTGCCGCGGCCTGGAGCAG ACGGGGGCGGCGGGCGAGAGAGGACCGTCGACGCTGAGGTTCATGGCTTA CCTGTGCCTCACGGCCTTTGAGGTGAGGAGTAACAGAGCCCCCCCCCCCC CCCCCCCCCCCCCCCGAAGGCTTAGCAAAGCAGGAAGGAACGATGGTCAT CGGTGATCGGTCTTGTGGGAACCATGCTCCGTCCTCTCGATGACGCGTGG TCAATGGTCTATATTCTAGGCACACAATATGTTAGGTACCTCCCATGAGG TGGTGTCTGTCTCGCGTCCCCAGGGCTGACGAGGGGGGCCGACGGAGGGG GTTTGGGGGGAGGAGGGGGCACAGAGGGACCTTTGCTGCGCGCTAATCTA CTACTCAAGCACGTGTTGGTGCACTTCTACATTTTTTTTTTCGTTTTTGT GATCTCTGTCGTTCTTGTTGTGTGGTGTTGTATATGCATAGCTTCCTGCT TTGCTTCCTTCGTGAGGTCGTGATGTGACTTGTTGGGAGGGAGGGAGGGA GGGAGGGAGGGGGGAGATGGTGTTGGTGTTGGTGTGTGTCGTTGCTTACC GGGGAAAGGAGGGCGGTGATTGGGACCGAAGGCAGACGGGAGGAACCGAT CTCCTAGACTGAACACACGGTCCCACCAACTCCAACCACAACCGGGCCAA GTCCTACACAAGCGTAAGTCACCCAGCTGCTGCTGCTGCTGCTACTGCTG CTGCTGCTACTGCTGCTGCTGCCTTAACCAGCCGGCCTCATGAACCTCCC CTTCCCTACCGTTGACGTTGCCAGTCCGAGCCGATCAAGAAAAAGGCCAC TCTTGCCATCGCCAACAACGTCCGACAACTGAGGCTCGCGCACCAACGCG CGACGGCTGCGGCCGCCGCCGCCGCCGCCGCTGCAGCTACGGCAGCAGCT GGCCACGACGACGACGACGACGCCGGCAGCGAAGGAGGGGGCGGGGGGTC GCCGGTTTCGACAAAGCAGTCGTCCGCGGCGGCGGCGGCGGGCTTGGAGA GGTCGATGCCGGAGTACGTGCTGCCTTACGCGATCCACCTGCTGGCGTAC CACCCGGACTTTCCGGTGCACAAGGCGAGAGAGAGGGAGAGTTGTGCGCT AAGTAGCGGCTACGGGTATTATAGTACGAGGGGTTGTTTGTGAGAAGTGG CATGGGTTTAAAGGAAGGAGAAGGCGCTTGTCACGGCCGTGAGACATAGA TGTAGTACGCCGCATGGGCTACGCTTTAGGGTTTTATAAGAGATACCGAT ATGATACACGAGAGAAGCACGGACATTACGAAGCGTAGAAAACGCTCGTC ACGGCCGTGAGACATACGTCTCGAGAGTGTTTTTGGCTTGCCCCGGCCTT CTCTTACACCGCCGTGACCGCTGTTAATTCTAGTCGAAATTCCAGCCCGC TTTTCACGCGGTGTCTTTTTGTCTCTTTTCATCCCCATCGGTGTGATCAG AACGACAAGCAGCGCATCAAGAACGTGGAGAAGTACCTCAACTTTCTCAT CGAGCCGCTCATCGGGGCCGGACGGCAGACGGGGGAGGCCGACAACATGT CCATGCTCCTGCAGATGCTGGACACGATCACCACGTCCTACCGCGATGCG CTCGACCCCTCCAACAACCGCATCCACCTCACCGCGCGAATAGCCCGCCA GGTT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10583:307..4210+

>mRNA_E-fasciculatus_F_contig10583.464.1 ID=mRNA_E-fasciculatus_F_contig10583.464.1|Name=mRNA_E-fasciculatus_F_contig10583.464.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3240bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10583:307..4210+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTACGTACGTTGGCAGGAAAACGGTTACCGGGAGGAGATGACGAGGGT
GCTCGCCGTCGTGGCCGCTTGCCGCCGCCCTCCGGACGAGGCAGAAGACG
ACGGCATGGGGGGAGGGAAGAAGAAGGGCGGGGGAGACGGGGAGGGGGAG
GAGGAGGAGAGGGGCGAGGAGGACGATGACGACGAGCTGCCGGACGGGTT
CTTGGATATGTACGTACGTTGGCAGGAAAACGGTTACCGGGAGGAGATGA
CGAGGGTGCTCGCCGTCGTGGCCGCTTGCCGCCGCCCTCCGGACGAGGCA
GAAGACGACGGCATGGGGGGAGGGAAGAAGAAGGGCGGGGGAGACGGGGA
GGGGGAGGAGGAGGAGAGGGGCGAGGAGGACGATGACGACGAGCTGCCGG
ACGGGTTCTTGGATAGCCTGGTGAAGCTCTGTACGAAGGAAGGCGCTCCG
TCAGAAGCAGCGGCAGCCGTCCGCGCCCTCGCCGCCCTCTCCTCCCGGCC
GGACACCCAGGCCGGCGAGGCCGCCAGGTTCTCTGCCCTCGATGCCCTCC
GCGAGACAGCTGCTGCCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGGGGGGGCGCGCGCTCCCGGCAAGAAGGCTAGGGGTGAGGTGGG
GGCGACGGAGGTTACGGCGCTAGCGGCGTTCGCGCGAGAGTTCCCGCGGG
AGTTCGAGAGGCACGAAGGAAAGGCGTTGTCGTTCGCGATGGCGAGGATG
TCGGGGGCGATCGGGGTCGGAGAAGGAAGAGAGGAGAAGGGGGAGGAGGA
GGAGGGTGCCAAGAAGGGTACCAAGAAGAAGAAGAAGCGTAGCGGTAACG
GCAAAGGAGCGGCGGCGGCGGCGGCGGCGGCAGTGTCGCCAGCTTGTCTC
ACGCTCTGCGCCTCGATAAAGCTCGCGTGCAACTGCCTCATGGCGCCAGG
TCGGGCCGCCGACGGTGGCCGAGACGGTGCGGCGGAAGACAGGGGAGAGG
CGTGGCTGAGGACAGTGTTTGCGCTGCTCAAGGCGGAGGGGCAGCCGGAG
AGTGAGGGCGAGGGGGAGATGGGGGAGGCGGAGCGGGCGGAGCTGAGGCT
GGCGGGATCGACCCGTGTCATGCGGCTCTGCGTCAACAGCGCCAACGTGC
AGAGCCTGGTGAAGCTCTGTACGAAGGAAGGCGCTCCGTCAGAAGCAGCG
GCAGCCGTCCGCGCCCTCGCCGCCCTCTCCTCCCGGCCGGACACCCAGGC
CGGCGAGGCCGCCAGGTTCTCTGCCCTCGATGCCCTCCGCGAGACAGCTG
CTGCCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGGGGG
GCGCGCGCTCCCGGCAAGAAGGCTAGGGGTGAGGTGGGGGCGACGGAGGT
TACGGCGCTAGCGGCGTTCGCGCGAGAGTTCCCGCGGGAGTTCGAGAGGC
ACGAAGGAAAGGCGTTGTCGTTCGCGATGGCGAGGATGTCGGGGGCGATC
GGGGTCGGAGAAGGAAGAGAGGAGAAGGGGGAGGAGGAGGAGGGTGCCAA
GAAGGGTACCAAGAAGAAGAAGAAGCGTAGCGGTAACGGCAAAGGAGCGG
CGGCGGCGGCGGCGGCGGCAGTGTCGCCAGCTTGTCTCACGCTCTGCGCC
TCGATAAAGCTCGCGTGCAACTGCCTCATGGCGCCAGGTCGGGCCGCCGA
CGGTGGCCGAGACGGTGCGGCGGAAGACAGGGGAGAGGCGTGGCTGAGGA
CAGTGTTTGCGCTGCTCAAGGCGGAGGGGCAGCCGGAGAGTGAGGGCGAG
GGGGAGATGGGGGAGGCGGAGCGGGCGGAGCTGAGGCTGGCGGGATCGAC
CCGTGTCATGCGGCTCTGCGTCAACAGCGCCAACGTGCAGACCCTGCTCA
CCCCTGATCGGTGGCACTCGCTGGCGTGGACGCTGATGGACCCGTCCGCG
AAAGTGAGGCTCGGTTTCATCCGCGAGGTGTGCCGCGGCCTGGAGCAGAC
GGGGGCGGCGGGCGAGAGAGGACCGTCGACGCTGAGGTTCATGGCTTACC
TGTGCCTCACGGCCTTTGAGACCCTGCTCACCCCTGATCGGTGGCACTCG
CTGGCGTGGACGCTGATGGACCCGTCCGCGAAAGTGAGGCTCGGTTTCAT
CCGCGAGGTGTGCCGCGGCCTGGAGCAGACGGGGGCGGCGGGCGAGAGAG
GACCGTCGACGCTGAGGTTCATGGCTTACCTGTGCCTCACGGCCTTTGAG
TCCGAGCCGATCAAGAAAAAGGCCACTCTTGCCATCGCCAACAACGTCCG
ACAACTGAGGCTCGCGCACCAACGCGCGACGGCTGCGGCCGCCGCCGCCG
CCGCCGCTGCAGCTACGGCAGCAGCTGGCCACGACGACGACGACGACGCC
GGCAGCGAAGGAGGGGGCGGGGGGTCGCCGGTTTCGACAAAGCAGTCGTC
CGCGGCGGCGGCGGCGGGCTTGGAGAGGTCGATGCCGGAGTACGTGCTGC
CTTACGCGATCCACCTGCTGGCGTACCACCCGGACTTTCCGTCCGAGCCG
ATCAAGAAAAAGGCCACTCTTGCCATCGCCAACAACGTCCGACAACTGAG
GCTCGCGCACCAACGCGCGACGGCTGCGGCCGCCGCCGCCGCCGCCGCTG
CAGCTACGGCAGCAGCTGGCCACGACGACGACGACGACGCCGGCAGCGAA
GGAGGGGGCGGGGGGTCGCCGGTTTCGACAAAGCAGTCGTCCGCGGCGGC
GGCGGCGGGCTTGGAGAGGTCGATGCCGGAGTACGTGCTGCCTTACGCGA
TCCACCTGCTGGCGTACCACCCGGACTTTCCGAACGACAAGCAGCGCATC
AAGAACGTGGAGAAGTACCTCAACTTTCTCATCGAGCCGCTCATCGGGGC
CGGACGGCAGACGGGGGAGGCCGACAACATGTCCATGCTCCTGCAGATGC
TGGACACGATCACCACGTCCTACCGCGATGCGCTCGACCCCTCCAACAAC
CGCATCCACCTCACCGCGCGAATAGCCCGCCAGGTTAACGACAAGCAGCG
CATCAAGAACGTGGAGAAGTACCTCAACTTTCTCATCGAGCCGCTCATCG
GGGCCGGACGGCAGACGGGGGAGGCCGACAACATGTCCATGCTCCTGCAG
ATGCTGGACACGATCACCACGTCCTACCGCGATGCGCTCGACCCCTCCAA
CAACCGCATCCACCTCACCGCGCGAATAGCCCGCCAGGTT
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