mRNA_E-fasciculatus_F_contig10558.442.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10558.442.1 vs. uniprot
Match: D7FK61_ECTSI (Efflux ABC transporter, permease/ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK61_ECTSI) HSP 1 Score: 303 bits (777), Expect = 1.100e-97 Identity = 159/165 (96.36%), Postives = 163/165 (98.79%), Query Frame = 1
Query: 1 QVGVVEQEPVLFGGSIADNIRYGRPEASRQEVEAAAAVANASAFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNRGEVVEVGSYDELASKPDGHFRRLVQYQML 495
+VGVVEQEPVLFGGSIADNIRYGRPEASR EVEAAAAVANAS FVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMA+KICVLN+GEVVE+GSYDELASKPDGHFRRLVQYQML
Sbjct: 470 RVGVVEQEPVLFGGSIADNIRYGRPEASRPEVEAAAAVANASDFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMANKICVLNKGEVVEIGSYDELASKPDGHFRRLVQYQML 634
BLAST of mRNA_E-fasciculatus_F_contig10558.442.1 vs. uniprot
Match: A0A7Y4NIU2_9DELT (ATP-binding cassette domain-containing protein n=1 Tax=Corallococcus exercitus TaxID=2316736 RepID=A0A7Y4NIU2_9DELT) HSP 1 Score: 195 bits (496), Expect = 1.060e-60 Identity = 106/165 (64.24%), Postives = 134/165 (81.21%), Query Frame = 1
Query: 4 VGVVEQEPVLFGGSIADNIRYGRPEASRQEVEAAAAVANASAFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNRGEVVEVGSYDELASKPDGHFRRLVQYQMLA 498
+G V QEP+LF SIADNIRYGRP+A+ EVEAAA ANA F++ FPDGY T+VGE GVQ+SGGQKQR+AIARAVLKDP I++LDEATSALD+ESEHLVQ ALER+ +GRT+LI+AHRLSTV + + ++ VL G VV+ GS+ L ++ +G +RRLV+ Q +A
Sbjct: 34 LGAVAQEPLLFSCSIADNIRYGRPDATDAEVEAAARAANAHDFIQRFPDGYRTEVGERGVQLSGGQKQRVAIARAVLKDPRILVLDEATSALDAESEHLVQEALERLMQGRTTLIIAHRLSTVAN-SHRVLVLEGGRVVQSGSHAALMAQ-EGLYRRLVERQFVA 196
BLAST of mRNA_E-fasciculatus_F_contig10558.442.1 vs. uniprot
Match: A0A7S1XAF5_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1XAF5_9CHLO) HSP 1 Score: 195 bits (496), Expect = 1.810e-60 Identity = 104/165 (63.03%), Postives = 130/165 (78.79%), Query Frame = 1
Query: 4 VGVVEQEPVLFGGSIADNIRYGRPEASRQEVEAAAAVANASAFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNRGEVVEVGSYDELASKPDGHFRRLVQYQMLA 498
VG+V QEP LF ++ADNI+ GRP AS EV AAA ANA+ F+E P+GY+T VGE GVQ+SGGQKQR+AIARAVLKDPAI+LLDEATSALD+ESE LVQ ALE++ GRT+++VAHRLST+R AD I V+ +G +VE GS+DEL + P+G + LV+ Q A
Sbjct: 49 VGLVSQEPTLFAMTVADNIKLGRPGASDAEVHAAAVTANAAGFIEKLPEGYNTYVGERGVQLSGGQKQRVAIARAVLKDPAILLLDEATSALDAESERLVQDALEKLMAGRTTVVVAHRLSTIRR-ADVIAVMKKGVIVERGSHDELLADPNGAYASLVRLQQAA 212
BLAST of mRNA_E-fasciculatus_F_contig10558.442.1 vs. uniprot
Match: A0A0D2MSK5_9CHLO (Multidrug/pheromone exporter, MDR family, ABC transporter family n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MSK5_9CHLO) HSP 1 Score: 194 bits (493), Expect = 3.120e-60 Identity = 101/162 (62.35%), Postives = 130/162 (80.25%), Query Frame = 1
Query: 4 VGVVEQEPVLFGGSIADNIRYGRPEASRQEVEAAAAVANASAFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNRGEVVEVGSYDELASKPDGHFRRLVQYQ 489
+G+V QEP+LF GSI DNIRYG P A++++VEAAA ANA F+ P GYDT+VGE GVQ+SGGQKQR+AIARAV+KDP +MLLDEATSALDS SE VQ AL+R++ GRT+++VAHRLST+R+ AD I V+ RG ++E G++DEL + P+G + RLV Q
Sbjct: 13 IGLVSQEPLLFSGSILDNIRYGAPGATQEQVEAAARAANAHDFIAALPGGYDTRVGERGVQLSGGQKQRVAIARAVVKDPRVMLLDEATSALDSASERAVQDALDRISVGRTTVVVAHRLSTIRN-ADVIAVVFRGVILEQGTHDELMALPNGGYARLVAAQ 173
BLAST of mRNA_E-fasciculatus_F_contig10558.442.1 vs. uniprot
Match: A0A2J8ACE1_9CHLO (ABC transporter B family member 4 (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8ACE1_9CHLO) HSP 1 Score: 196 bits (499), Expect = 4.480e-60 Identity = 99/163 (60.74%), Postives = 133/163 (81.60%), Query Frame = 1
Query: 1 QVGVVEQEPVLFGGSIADNIRYGRPEASRQEVEAAAAVANASAFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNRGEVVEVGSYDELASKPDGHFRRLVQYQ 489
++G+V QEP+LF G+IADNI G+P+ASR E+ AA ANA AF+E P+ YDT+VGEGG+Q+SGGQKQR+AIARAV+K+P +MLLDEATSALD+ SE +VQAAL+R+ EGRTS+++AHRLST+R+ A I V+ RG ++E GS++EL + P+G + RLV Q
Sbjct: 104 RIGLVSQEPLLFNGTIADNILIGKPDASRAEIVEAAEAANARAFIEALPEKYDTRVGEGGIQLSGGQKQRVAIARAVVKNPKVMLLDEATSALDARSESVVQAALDRIMEGRTSIVIAHRLSTIRN-AHTIAVVYRGAILERGSHEELMALPNGSYSRLVAAQ 265
BLAST of mRNA_E-fasciculatus_F_contig10558.442.1 vs. uniprot
Match: A0A835ZGY2_9STRA (Efflux ABC transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGY2_9STRA) HSP 1 Score: 202 bits (513), Expect = 5.390e-59 Identity = 107/163 (65.64%), Postives = 127/163 (77.91%), Query Frame = 1
Query: 4 VGVVEQEPVLFGGSIADNIRYGRPEASRQEVEAAAAVANASAFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNRGEVVEVGSYDELASKPDGHFRRLVQYQM 492
VG+V+QEPVLF SIADNIRYGRPEA+ EV AA VANA F+ F GY TQ G G Q+SGGQ+QRIAIARAVLKDPA++LLDE +SALDS+SE VQ ALE VT GRTS+I+AHRLST R+MADKI V++ G VVE GS+DEL ++ G FRR+ Q+
Sbjct: 411 VGIVDQEPVLFNASIADNIRYGRPEATDAEVVQAAKVANAHEFITQFSHGYQTQAGASGQQLSGGQRQRIAIARAVLKDPAVLLLDEFSSALDSDSEQRVQEALEHVTRGRTSIIIAHRLSTARAMADKIAVMDSGRVVESGSFDELMARDGGVFRRMYLTQV 573
BLAST of mRNA_E-fasciculatus_F_contig10558.442.1 vs. uniprot
Match: A0A3A8Q2R5_9DELT (ATP-binding cassette domain-containing protein n=1 Tax=Corallococcus llansteffanensis TaxID=2316731 RepID=A0A3A8Q2R5_9DELT) HSP 1 Score: 201 bits (511), Expect = 1.080e-58 Identity = 108/166 (65.06%), Postives = 133/166 (80.12%), Query Frame = 1
Query: 1 QVGVVEQEPVLFGGSIADNIRYGRPEASRQEVEAAAAVANASAFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNRGEVVEVGSYDELASKPDGHFRRLVQYQMLA 498
QVG V QEP+LF G++ADNIRY RP+AS +EVEAAA ANA F+ FP+GY T+VGE G Q+SGGQKQRIAIARAVLKDP I++LDEATSALD+ESEHLVQ AL+R+ +GRT+L++AHRLSTVR AD++ VL G VV+ G + L + DG +RRLV+ Q LA
Sbjct: 421 QVGTVSQEPLLFSGTVADNIRYARPDASLEEVEAAARAANAHDFITRFPEGYATRVGERGAQLSGGQKQRIAIARAVLKDPRILVLDEATSALDAESEHLVQEALDRLMQGRTTLVIAHRLSTVRG-ADRVLVLEGGAVVQSGDHASLLGQ-DGLYRRLVERQALA 584
BLAST of mRNA_E-fasciculatus_F_contig10558.442.1 vs. uniprot
Match: A0A1S1Z4H8_9BACT (Multidrug ABC transporter ATP-binding protein n=1 Tax=Flammeovirga pacifica TaxID=915059 RepID=A0A1S1Z4H8_9BACT) HSP 1 Score: 201 bits (511), Expect = 1.240e-58 Identity = 106/162 (65.43%), Postives = 130/162 (80.25%), Query Frame = 1
Query: 4 VGVVEQEPVLFGGSIADNIRYGRPEASRQEVEAAAAVANASAFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNRGEVVEVGSYDELASKPDGHFRRLVQYQ 489
VGVV QE +LFGGSI +NIRYG PEAS++ V AAA ANA F+E FP+G+DT VGE GV++SGGQ+QRIAIARA+LKDPAI++LDEATSALD ESE LVQ ALE + EGRTSLI+AHRLST+R+ ADKI VL G + E+G ++EL K G + +L+Q Q
Sbjct: 431 VGVVPQEVLLFGGSIEENIRYGNPEASQEAVIAAAKKANALEFIESFPEGFDTLVGERGVKLSGGQRQRIAIARAILKDPAILILDEATSALDIESEKLVQEALETLMEGRTSLIIAHRLSTIRN-ADKIAVLENGSIKEIGKHEELMQKESGAYNKLIQLQ 591
BLAST of mRNA_E-fasciculatus_F_contig10558.442.1 vs. uniprot
Match: UPI0019827A9C (ATP-binding cassette domain-containing protein n=1 Tax=Bacteriovorax sp. TaxID=2608087 RepID=UPI0019827A9C) HSP 1 Score: 194 bits (492), Expect = 1.900e-58 Identity = 101/163 (61.96%), Postives = 130/163 (79.75%), Query Frame = 1
Query: 1 QVGVVEQEPVLFGGSIADNIRYGRPEASRQEVEAAAAVANASAFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNRGEVVEVGSYDELASKPDGHFRRLVQYQ 489
QVG+V QEP+L SI DNIRYG+P+A+ EV AAA +A A F+ FPDGY T VGE GVQ+SGGQKQR+AIARAVLKDP I++LDEATSALDSESE+LVQAALE + +GRT+LI+AHRLSTV+ +DKI V++ GE+V+ G ++EL +G + +L++ Q
Sbjct: 160 QVGIVSQEPILISESIEDNIRYGKPDATFLEVTAAAKIAYAHDFITSFPDGYKTLVGEKGVQLSGGQKQRVAIARAVLKDPKILILDEATSALDSESEYLVQAALENLQKGRTTLIIAHRLSTVKK-SDKIFVMDHGEIVQSGPHEELILYKEGFYNKLIEKQ 321
BLAST of mRNA_E-fasciculatus_F_contig10558.442.1 vs. uniprot
Match: A0A4V0XF63_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A4V0XF63_9DELT) HSP 1 Score: 200 bits (509), Expect = 1.940e-58 Identity = 105/163 (64.42%), Postives = 134/163 (82.21%), Query Frame = 1
Query: 1 QVGVVEQEPVLFGGSIADNIRYGRPEASRQEVEAAAAVANASAFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNRGEVVEVGSYDELASKPDGHFRRLVQYQ 489
Q+G+V QEPVLF +IA+NIRYGRP AS EVEAAA ANA FV GFP+ Y+T VGE GV++SGGQKQRIAIARA+LKDP +++LDEATSALD+ESEHLVQ AL+R+ GRT+L++AHRLSTV++ ADK+ V+ G V E G++DEL + +G +RRLV++Q
Sbjct: 417 QIGIVSQEPVLFATTIAENIRYGRPGASDAEVEAAARAANAHDFVGGFPEKYETVVGERGVRLSGGQKQRIAIARAILKDPRVLVLDEATSALDAESEHLVQEALDRLMRGRTTLVIAHRLSTVKT-ADKVVVIQHGRVAESGTHDELVAA-NGAYRRLVEHQ 577 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10558.442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10558.442.1 >prot_E-fasciculatus_F_contig10558.442.1 ID=prot_E-fasciculatus_F_contig10558.442.1|Name=mRNA_E-fasciculatus_F_contig10558.442.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=167bp QVGVVEQEPVLFGGSIADNIRYGRPEASRQEVEAAAAVANASAFVEGFPDback to top mRNA from alignment at E-fasciculatus_F_contig10558:28..3354+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10558.442.1 ID=mRNA_E-fasciculatus_F_contig10558.442.1|Name=mRNA_E-fasciculatus_F_contig10558.442.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3327bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10558:28..3354+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10558:28..3354+ >mRNA_E-fasciculatus_F_contig10558.442.1 ID=mRNA_E-fasciculatus_F_contig10558.442.1|Name=mRNA_E-fasciculatus_F_contig10558.442.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1002bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10558:28..3354+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |