mRNA_E-fasciculatus_F_contig10556.441.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10556.441.1
Unique NamemRNA_E-fasciculatus_F_contig10556.441.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig10556.441.1 vs. uniprot
Match: D7FP36_ECTSI (Cu2_monoox_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP36_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 5.630e-142
Identity = 205/230 (89.13%), Postives = 213/230 (92.61%), Query Frame = 1
Query:    1 MGVIKLGDPYVALESQPLPDGKSTVSFGCPSTCTDTHFEEGAKCEEVTVFSHLLHMHENGQRMLTRQYRSDSDGNEVLYHTADVEYYSFLQAGAHVVTVNDSITIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDYILYYPDQRLPSGGACGLSACDGSVLGYSELEDDSDFNRTFGIVDTCTSGATGEAEGESSSSSRATLPLLRLFAVFTTAALVLEAVIV 690
            MGVIKLGDPYVALESQ LPDGKST SFGCPSTCT+THFEE    EEVTVFSHLLHMHENGQRMLTRQYR+DSDGNEVL HTADVEYYSFLQAGAHVV+VNDS TIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDY+LYYPDQRLP+GGACGL ACDGS+L YSELE+DSDFNRTFG+VDTCTS A GE   ESSSSSRATL LL LFAVFTTAALVLEAVIV
Sbjct:    1 MGVIKLGDPYVALESQTLPDGKSTFSFGCPSTCTETHFEE----EEVTVFSHLLHMHENGQRMLTRQYRTDSDGNEVLLHTADVEYYSFLQAGAHVVSVNDSTTIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDYVLYYPDQRLPNGGACGLLACDGSILSYSELEEDSDFNRTFGVVDTCTSSANGEEGDESSSSSRATLHLLGLFAVFTTAALVLEAVIV 226          
BLAST of mRNA_E-fasciculatus_F_contig10556.441.1 vs. uniprot
Match: D7FP38_ECTSI (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP38_ECTSI)

HSP 1 Score: 346 bits (888), Expect = 1.220e-113
Identity = 172/230 (74.78%), Postives = 194/230 (84.35%), Query Frame = 1
Query:    1 MGVIKLGDPYVALESQPLPDGKSTVSFGCPSTCTDTHFEEGAKCEEVTVFSHLLHMHENGQRMLTRQYRSDSDGNEVLYHTADVEYYSFLQAGAHVVTVNDSITIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDYILYYPDQRLPSGGACGLSACDGSVLGYSELEDDSDFNRTFGIVDTCTSGATGEAEGESSSSSRATLPLLRLFAVFTTAALVLEAVIV 690
            MG++KLGDP  AL  QPLPDGKS  SFGCP TCT+T+FEE    EEVTVFSHLLHMHENGQR+ TRQYR+D DGNEVL HTA+VEYYSFLQAG HVVTVNDS TIKKGDVFTTEC+YDTSYSSV S NVT+GLGSENEMCID++ YYPDQ+LP  GACG + C+G++LGYSELED SDFNRTFG+VDTCTS    E   E +SSSRATLP+  LFA+ T AALVLEA++V
Sbjct:  374 MGLVKLGDPQGALHPQPLPDGKSVYSFGCPGTCTETYFEE----EEVTVFSHLLHMHENGQRISTRQYRNDGDGNEVLIHTAEVEYYSFLQAGVHVVTVNDSTTIKKGDVFTTECYYDTSYSSVGSPNVTWGLGSENEMCIDFVFYYPDQKLPDRGACGSNLCNGTLLGYSELEDVSDFNRTFGVVDTCTSSDGVEEGQELTSSSRATLPMFGLFAISTAAALVLEAILV 599          
BLAST of mRNA_E-fasciculatus_F_contig10556.441.1 vs. uniprot
Match: D7G217_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G217_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 7.500e-108
Identity = 165/224 (73.66%), Postives = 184/224 (82.14%), Query Frame = 1
Query:    1 MGVIKLGDPYVALESQPLPDGKSTVSFGCPSTCTDTHFEEGAKCEEVTVFSHLLHMHENGQRMLTRQYRSDSDGNEVLYHTADVEYYSFLQAGAHVVTVNDSITIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDYILYYPDQRLPSGGACGLSACDGSVLGYSELEDDSDFNRTFGIVDTCTSGATGEAEG-ESSSSSRATLPLLRL-FAVFTTAA 666
            MGV+KLGDP+VAL  QPLP+GKS+ SFGCP TC++T+FEE    EEVT+F+H+LHMHENGQRM+T QYR D +GNE L HT +V YYSFLQAGAHVVTVN S TIKKGD FTT+C YDTS SSVD +NVTFG GSE EMCIDYI YYPDQRLP GGACG+ ACDG +LGY+ELE DSDFNRTFGIVDTCTS   GE EG +SSSSSRA  PLL L FAV T  A
Sbjct:  233 MGVLKLGDPFVALYDQPLPEGKSSFSFGCPGTCSETNFEE----EEVTIFNHVLHMHENGQRMVTHQYRDDGEGNEELIHTTEVGYYSFLQAGAHVVTVNGSATIKKGDSFTTQCMYDTSLSSVDPANVTFGEGSEQEMCIDYIFYYPDQRLPDGGACGVFACDGGILGYAELEADSDFNRTFGIVDTCTSSLPGEEEGSDSSSSSRAAQPLLGLMFAVSTVIA 452          
BLAST of mRNA_E-fasciculatus_F_contig10556.441.1 vs. uniprot
Match: D7G337_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G337_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 4.460e-106
Identity = 163/220 (74.09%), Postives = 188/220 (85.45%), Query Frame = 1
Query:    1 MGVIKLGDPYVALESQPLPDGKSTVSFGCPSTCTDTHFEEGAKCEEVTVFSHLLHMHENGQRMLTRQYRSDSDGNEVLYHTADVEYYSFLQAGAHVVTVNDSITIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDYILYYPDQRLPSGGACGLSACDGSVLGYSELEDDSDFNRTFGIVDTCTSGATGEAEG-ESSSSSRATLPLLRL-FAVF 654
            MG++KLGDP+VAL  QPLP+GKS+ SFGCP +C++T+FEE    EEVTVF H+LHMHENGQRM+TRQYR+DSDGNEVL HTA+VEYYS LQAG H+VT N++ITI+KGD FTTEC YDTS SSV S+NVTFGLGSE EMCID++ YYPDQR+P  GACG+ ACDG VLGYS+LE DSDFNRTFGIVDTCTS  TG+ EG ESSSSSRA  PLL L +AVF
Sbjct:  387 MGLMKLGDPFVALYDQPLPEGKSSFSFGCPGSCSETNFEE----EEVTVFIHMLHMHENGQRMVTRQYRNDSDGNEVLIHTAEVEYYSVLQAGGHLVTNNETITIRKGDRFTTECMYDTSLSSVSSANVTFGLGSEQEMCIDFVFYYPDQRMPDTGACGVGACDGGVLGYSQLEADSDFNRTFGIVDTCTSSFTGDEEGNESSSSSRAAQPLLGLLWAVF 602          
BLAST of mRNA_E-fasciculatus_F_contig10556.441.1 vs. uniprot
Match: D7G216_ECTSI (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G216_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 5.540e-105
Identity = 167/231 (72.29%), Postives = 189/231 (81.82%), Query Frame = 1
Query:    1 MGVIKLGDPYVALESQPLPDGKSTVSFGCPSTCTDTHFEEGAKCEEVTVFSHLLHMHENGQRMLTRQYRSDSDGNEVLYHTADVEYYSFLQAGAHVVTVNDSITIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDYILYYPDQRLPSGGACGLSACDGSVLGYSELEDDSDFNRTFGIVDTCTSGATGEAEG-ESSSSSRATLPLLR-LFAVFTT-AALVLEAV 684
            MGV+KLGDP++AL  QPLPDGKS+ SFGCP TC++T+FEE    EEVT+F+H+LHMHENGQRM+T QYR D +GNE L HT +V YYS LQAGAHVVTVN S TIKKGD FTT+C YDTS SSV S+NVTFGLGSE EMC+++I YYPDQRLP GGACG+ ACDG VLGY ELE DSDFNRTFGIVDTCTS  +GE EG +SSSSSRA  PLL  LFAV T  AAL LE +
Sbjct:  405 MGVLKLGDPFIALSDQPLPDGKSSFSFGCPGTCSETNFEE----EEVTIFNHVLHMHENGQRMVTHQYRDDGEGNEELIHTTEVWYYSSLQAGAHVVTVNGSATIKKGDSFTTQCMYDTSLSSVGSANVTFGLGSEQEMCVNFIFYYPDQRLPDGGACGVFACDGGVLGYEELEADSDFNRTFGIVDTCTSSLSGEEEGSDSSSSSRAAQPLLGPLFAVSTIIAALSLEII 631          
BLAST of mRNA_E-fasciculatus_F_contig10556.441.1 vs. uniprot
Match: D8LD47_ECTSI (DOMON domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD47_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 4.480e-76
Identity = 124/191 (64.92%), Postives = 142/191 (74.35%), Query Frame = 1
Query:    1 MGVIKLGDPYVALESQPLPDGKSTVSFGCPSTCTDTHFEEGAKCEEVTVFSHLLHMHENGQRMLTRQYRSDSDGNEVLYHTADVEYYSFLQAGAHVVTVNDSITIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDYILYYPDQRLPSGGACG-LSACDGSVLGYSELEDDSDFNRTFGIVDTCT 570
            MGVI LGDP V L    LP+GKS+V F CP  CT+T+FE     E VTV+SH LHMHENGQRM TRQYR+DSDGNE L    +VEYYSFLQAG HV   N S  I+KGD F T C+YDTS SSVDS+NVTFG GSE EMC+D++ YYP Q +P GG CG L  C GS LG +EL D++DFNRTFGIVD+CT
Sbjct:  383 MGVITLGDPSVDLIGTKLPEGKSSVEFDCPGACTETYFE----AESVTVYSHFLHMHENGQRMETRQYRNDSDGNEQLVDATEVEYYSFLQAGGHVTAHNGSDIIQKGDRFETTCYYDTSLSSVDSTNVTFGEGSEQEMCMDFLFYYPAQIIPDGGYCGGLERCGGSFLGITELGDETDFNRTFGIVDSCT 569          
BLAST of mRNA_E-fasciculatus_F_contig10556.441.1 vs. uniprot
Match: A0A6H5K5A3_9PHAE (Cu2_monoox_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A3_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 1.290e-61
Identity = 119/264 (45.08%), Postives = 139/264 (52.65%), Query Frame = 1
Query:    1 MGVIKLGDPYVALESQPLPDGKSTVSFGCPSTCTDTHFEEGAKCEEVTVFSHLLHMHENGQRMLTRQYRSDSDGNEVLYHTADVEYYSFLQAGAHVVTVNDS------------------------ITIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEM-------------------------------------------------CIDYILYYPDQRLPSGGACG-LSACDGSVLGYSELEDDSDFNRTFGIVDTCT 570
            MGVI LGDP V L    LP+GKS+V F CP  CT+T+ E     E VTV+SH LHMH NGQRM TRQYRSDSDGNE L    +VEYYSFLQAG HV   N S                        + ++KGD F T C+YDTS SSVDS+NVTFG GSE  M                                                 C+D++ YYP Q +  GG CG L  C GS LG ++LED++D NRTFGIVD+CT
Sbjct:   65 MGVITLGDPNVDLTGTKLPEGKSSVEFDCPGVCTETYLE----AESVTVYSHFLHMHGNGQRMETRQYRSDSDGNEQLVDATEVEYYSFLQAGGHVTAHNGSDIIQYIHYLLPPNAFVLPCLAFVSVFLQKGDSFETTCYYDTSLSSVDSTNVTFGEGSEEGMGKIDDETALVRLKAYHTNEQNSETVYVRAGSFSVVTVVDADKNDTHTHVCMDFLFYYPAQIIRDGGYCGGLERCGGSFLGITDLEDETDLNRTFGIVDSCT 324          
BLAST of mRNA_E-fasciculatus_F_contig10556.441.1 vs. uniprot
Match: A0A7S2K1A9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1A9_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.530e-28
Identity = 76/193 (39.38%), Postives = 104/193 (53.89%), Query Frame = 1
Query:    1 MGVIKLGDPYVALESQPLPDGKSTVSFGCPSTCTDTHFEEGAKCEEVTVFSHLLHMHENGQRMLTRQYRSDSDGNEVLYHTADVEYYSFLQAGAHVVTVNDSITIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDYILYYPDQRLPS--GG--ACGLSACDGSVLG-YSELEDDS--DFNRTFGIV 558
            +G+ +L DP V+L    +  G +  +  CP +C+D +F +     +VTVFS  LHMH  G+RM T+  R     N V+ H A V+Y+ F +AG +V     S T+++GD F T C+Y+T          TFGLGSENEMCI Y+ YYP Q   +  GG   CGL+A      G YS +  D   D  R FG  
Sbjct:   35 IGIFELADPRVSLIGNKVGSGVTQHTITCPGSCSDVNFNQ-----DVTVFSQGLHMHNTGERMETKHKR-----NGVILHEASVDYFDFNKAGVYVPQ-QPSFTLQQGDAFETTCYYNT------EKTTTFGLGSENEMCIQYLFYYPRQAAAATAGGYSTCGLAAERNDCRGDYSTITLDGLEDMGRAFGTT 210          
BLAST of mRNA_E-fasciculatus_F_contig10556.441.1 vs. uniprot
Match: A0A7S0ASV8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASV8_9STRA)

HSP 1 Score: 120 bits (301), Expect = 9.330e-28
Identity = 74/189 (39.15%), Postives = 104/189 (55.03%), Query Frame = 1
Query:    4 GVIKLGDPYVALESQPLPDGKSTVSFGCPSTCTDTHFEEGAKCEEVTVFSHLLHMHENGQRMLTRQYRSDSDGNEVLYHTADVEYYSFLQAGAHVVTVNDSITIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDYILYYPDQRLPSGGACGLS----ACDGSVLGYSELEDDSDFNRTFGIV 558
            G+++LGDP V L  +P+  G     F CPS+CT  +F E     EVTV+  +LHMHE G+ M     R   DG EV+   A V+Y+ F QAG H V    + TIK GD   T C ++T+ S      + +G GS++EMC+ Y+ YYP Q++P G  CG +    AC  ++      E  S+  R FG+V
Sbjct:  373 GILQLGDPIVQLAGEPIGQGLVRHDFNCPSSCTSFNFRE-----EVTVYKEVLHMHEKGEFMFNEIIR---DG-EVM-RRASVDYFDFEQAGLHEVQ-QGTFTIKPGDSIRTSCSFNTTSSK---KGIEYGYGSQDEMCVSYMHYYPKQKIPLG-VCGANWFFPACSATLT----TEPISEVERVFGVV 542          
BLAST of mRNA_E-fasciculatus_F_contig10556.441.1 vs. uniprot
Match: A0A1Z5JSD8_FISSO (DOMON domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSD8_FISSO)

HSP 1 Score: 110 bits (274), Expect = 4.080e-24
Identity = 66/152 (43.42%), Postives = 86/152 (56.58%), Query Frame = 1
Query:    1 MGVIKLGDPYVALESQPLPDGKSTVSFGCPSTCTDTHFEEGAKCEEVTVFSHLLHMHENGQRMLTRQYRSDSDGNEVLYHTADVEYYSFLQAGAHVVTVNDSITIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDYILYYPDQRL 456
            +G+++LGDP ++LE QP+ DG +   F CPSTCT+T  ++     EVTV    LHMH  G  M     R   DG EV+ HT  V+Y+ F Q G  +V      T+KKGD + T C YD         N TFG  S+ EMCI +I+YYP Q L
Sbjct:  362 LGLLRLGDPIISLEGQPVGDGLTQHIFDCPSTCTETMLKQ-----EVTVLREYLHMHYAGATMQNELIR---DG-EVI-HTGTVDYFRFDQQGNQLVK-QMPYTVKKGDAYRTICNYDDK-----GRNATFGFSSQEEMCIVFIMYYPKQIL 497          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10556.441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP36_ECTSI5.630e-14289.13Cu2_monoox_C domain-containing protein n=1 Tax=Ect... [more]
D7FP38_ECTSI1.220e-11374.78DOMON domain-containing protein n=2 Tax=Ectocarpus... [more]
D7G217_ECTSI7.500e-10873.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G337_ECTSI4.460e-10674.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G216_ECTSI5.540e-10572.29DOMON domain-containing protein n=2 Tax=Ectocarpus... [more]
D8LD47_ECTSI4.480e-7664.92DOMON domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K5A3_9PHAE1.290e-6145.08Cu2_monoox_C domain-containing protein n=1 Tax=Ect... [more]
A0A7S2K1A9_9STRA1.530e-2839.38Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S0ASV8_9STRA9.330e-2839.15Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A1Z5JSD8_FISSO4.080e-2443.42DOMON domain-containing protein n=2 Tax=Fistulifer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10556contigE-fasciculatus_F_contig10556:2355..4357 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score409.1
Seed ortholog evalue1.4e-111
Seed eggNOG ortholog2880.D7FP36
EggNOG free text desc.octopamine biosynthetic process
EggNOG OGsKOG3568@1,KOG3568@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPHM/PNGase F domain
Ec32 orthologEc-10_002340.1
Exons5
Model size693
Cds size693
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10556.441.1prot_E-fasciculatus_F_contig10556.441.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10556 2355..4357 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927553.4763057-CDS-E-fasciculatus_F_contig10556:2354..24871622927553.4763057-CDS-E-fasciculatus_F_contig10556:2354..2487Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10556 2355..2487 +
1695995592.4191394-CDS-E-fasciculatus_F_contig10556:2354..24871695995592.4191394-CDS-E-fasciculatus_F_contig10556:2354..2487Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10556 2355..2487 +
1622927553.504359-CDS-E-fasciculatus_F_contig10556:2745..29301622927553.504359-CDS-E-fasciculatus_F_contig10556:2745..2930Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10556 2746..2930 +
1695995592.4311697-CDS-E-fasciculatus_F_contig10556:2745..29301695995592.4311697-CDS-E-fasciculatus_F_contig10556:2745..2930Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10556 2746..2930 +
1622927553.5316386-CDS-E-fasciculatus_F_contig10556:3216..33141622927553.5316386-CDS-E-fasciculatus_F_contig10556:3216..3314Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10556 3217..3314 +
1695995592.4422078-CDS-E-fasciculatus_F_contig10556:3216..33141695995592.4422078-CDS-E-fasciculatus_F_contig10556:3216..3314Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10556 3217..3314 +
1622927553.5443573-CDS-E-fasciculatus_F_contig10556:3626..37981622927553.5443573-CDS-E-fasciculatus_F_contig10556:3626..3798Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10556 3627..3798 +
1695995592.4502494-CDS-E-fasciculatus_F_contig10556:3626..37981695995592.4502494-CDS-E-fasciculatus_F_contig10556:3626..3798Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10556 3627..3798 +
1622927553.556226-CDS-E-fasciculatus_F_contig10556:4252..43571622927553.556226-CDS-E-fasciculatus_F_contig10556:4252..4357Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10556 4253..4357 +
1695995592.4585238-CDS-E-fasciculatus_F_contig10556:4252..43571695995592.4585238-CDS-E-fasciculatus_F_contig10556:4252..4357Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10556 4253..4357 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10556.441.1

>prot_E-fasciculatus_F_contig10556.441.1 ID=prot_E-fasciculatus_F_contig10556.441.1|Name=mRNA_E-fasciculatus_F_contig10556.441.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=231bp
MGVIKLGDPYVALESQPLPDGKSTVSFGCPSTCTDTHFEEGAKCEEVTVF
SHLLHMHENGQRMLTRQYRSDSDGNEVLYHTADVEYYSFLQAGAHVVTVN
DSITIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDYILYYPDQ
RLPSGGACGLSACDGSVLGYSELEDDSDFNRTFGIVDTCTSGATGEAEGE
SSSSSRATLPLLRLFAVFTTAALVLEAVIV*
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mRNA from alignment at E-fasciculatus_F_contig10556:2355..4357+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10556.441.1 ID=mRNA_E-fasciculatus_F_contig10556.441.1|Name=mRNA_E-fasciculatus_F_contig10556.441.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2003bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10556:2355..4357+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGGGTGATTAAGCTGGGAGATCCGTACGTCGCGCTCGAATCTCAGCC CCTGCCGGACGGCAAGTCTACTGTCTCTTTCGGTTGCCCAAGCACTTGCA CCGACACACACTTCGAGGAGGGCGCAAAATGCGGTCTTGGTTGATTTTTA GGGCGAGGTGGCTCGCTCTTGACTGCTACTCTGCAAGTCTCTGATGCACG AATGTTTACGTGTGCTGAACAGCACGGGACTCCTCCGCCAACCCCCCCCC TTTCCCCCTCCGCCAACGCTCGCAGAGCTCCTAATTGTATCAGGGTAGAG GACACCGATCCTATGAGCGCGTTTCTTATCTCCTTCCGTCATTCTCTCAT TTGCTTTATCCCACTGCATTGAATGCACGTTTCTCAGGAAGAGGAGGTCA CCGTCTTCAGCCACTTGTTACACATGCACGAAAATGGCCAGCGGATGTTG ACCCGGCAGTATCGCAGCGACAGCGATGGCAACGAGGTGCTGTACCACAC GGCCGACGTCGAGTACTACTCCTTCCTGCAGGCCGGCGCGCACGTGGTGA CCGTCAACGACAGCATCACCATCAAAGTGCGTCAGGAGTGAACGCGATGC CTCGAGACTTGAGTAGTGGTAAATTTAGGATGTGACACATCAAGTCTTCC TCGTCGGGTTGTTGAAGCTTACCACCGCTGCCATCCCTGGAATTTCGTGT ATGCAAGTCTCAGTTGCCAATTGTATCCCTCAGTCTCACCCCGGCCACTC GGGACGTCTGAGGAATGGATCATTGTCCCGCGCGTCAGCACGTGAGCGGG TTTCTTTACGCCGCTTCCATGTTTCCTTGTGTGCCTCCTACCTACGCGCC TTCTTTCCCCAGAAAGGTGACGTGTTCACCACGGAGTGCTTTTACGACAC ATCGTACTCTTCGGTAGACTCGTCCAACGTCACCTTCGGCCTGGGATCGG AAAATGAAATGTGAGCCCGGAGTTCTGACGGCACCATTGACCTGCGCCGT CGCCACTGCCATGCACCGTAGACGAATGGAAAGGTCCAGACTTTCGTCCT TTCAGCTGCCATCCAACGACGTCGCTCAATAGCCATACTCTTTATATCTT CATGGGTGCACTAGGCTTCCCAAGGGTAGAGATGAGCAAGACGTTGTTGT CTCCCGACAACGTGTTTGAGCGTCGCGGTCTTCAACTTCGACCCTAGTGG TTTTTACGGTCTCCGATAGTACCACTCTCGTCACAAACCTCTTCCCCCTT GTACGTGCGGAACCACGCGCAGGTGCATCGACTACATCTTGTACTATCCG GACCAGAGACTACCCAGCGGCGGTGCTTGCGGGCTCTCTGCATGCGATGG CAGCGTTTTGGGCTATTCAGAGTTGGAGGATGACTCGGACTTCAACCGTA CCTTCGGGATAGTGGACACTTGCACTTCGGGTGCAACCGGAGAGGTACGC TGTGCATACAATGAATGACGAAATTTGACGGAAAACATGCATCGAATACA CAGCACGAGGTCCCACACCACGACTCGCGTGAGGGTCTCTACTTGCCTCT TTTTATGAACAGATGGACCTCATGTAGTAGAAAGTCGCGGGTGGTTCTGA TATGTTCCGGTCTTGTAGGCCCCTCCTTGTCATCCCCGATAGCTTCGTTC CCGGACAATCTGGCTCCGTCAACGGGACGCCCACCACTGCCGTTTCTAGA GTTTCAAATGCGTTTCTCGTTTAGTCTAATCGCTGCTTCCGCAATGCGGA CATCTGCGTGCGGTCTTCTGCCGGCTAGCTCCTCAATCGGCCGCCATTCT CATCCCTCGCAAATATCGTATACCATTGGTAAATATGTTCACCTATTTCT TGGTGCTAATGCCCCCCTCCCCCACCGAATGCGCCTCATCGTTGACAGGC GGAGGGTGAATCGAGCTCGTCATCACGTGCCACCCTGCCTCTTCTTCGAC TGTTTGCAGTTTTCACGACCGCGGCGCTCGTGCTCGAGGCCGTCATAGTG TAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10556:2355..4357+

>mRNA_E-fasciculatus_F_contig10556.441.1 ID=mRNA_E-fasciculatus_F_contig10556.441.1|Name=mRNA_E-fasciculatus_F_contig10556.441.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1386bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10556:2355..4357+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGGGTGATTAAGCTGGGAGATCCGTACGTCGCGCTCGAATCTCAGCC
CCTGCCGGACGGCAAGTCTACTGTCTCTTTCGGTTGCCCAAGCACTTGCA
CCGACACACACTTCGAGGAGGGCGCAAAATGCGATGGGGGTGATTAAGCT
GGGAGATCCGTACGTCGCGCTCGAATCTCAGCCCCTGCCGGACGGCAAGT
CTACTGTCTCTTTCGGTTGCCCAAGCACTTGCACCGACACACACTTCGAG
GAGGGCGCAAAATGCGAGGAGGTCACCGTCTTCAGCCACTTGTTACACAT
GCACGAAAATGGCCAGCGGATGTTGACCCGGCAGTATCGCAGCGACAGCG
ATGGCAACGAGGTGCTGTACCACACGGCCGACGTCGAGTACTACTCCTTC
CTGCAGGCCGGCGCGCACGTGGTGACCGTCAACGACAGCATCACCATCAA
AAGGAGGTCACCGTCTTCAGCCACTTGTTACACATGCACGAAAATGGCCA
GCGGATGTTGACCCGGCAGTATCGCAGCGACAGCGATGGCAACGAGGTGC
TGTACCACACGGCCGACGTCGAGTACTACTCCTTCCTGCAGGCCGGCGCG
CACGTGGTGACCGTCAACGACAGCATCACCATCAAAAAAGGTGACGTGTT
CACCACGGAGTGCTTTTACGACACATCGTACTCTTCGGTAGACTCGTCCA
ACGTCACCTTCGGCCTGGGATCGGAAAATGAAATAAAGGTGACGTGTTCA
CCACGGAGTGCTTTTACGACACATCGTACTCTTCGGTAGACTCGTCCAAC
GTCACCTTCGGCCTGGGATCGGAAAATGAAATGTGCATCGACTACATCTT
GTACTATCCGGACCAGAGACTACCCAGCGGCGGTGCTTGCGGGCTCTCTG
CATGCGATGGCAGCGTTTTGGGCTATTCAGAGTTGGAGGATGACTCGGAC
TTCAACCGTACCTTCGGGATAGTGGACACTTGCACTTCGGGTGCAACCGG
AGAGGTGCATCGACTACATCTTGTACTATCCGGACCAGAGACTACCCAGC
GGCGGTGCTTGCGGGCTCTCTGCATGCGATGGCAGCGTTTTGGGCTATTC
AGAGTTGGAGGATGACTCGGACTTCAACCGTACCTTCGGGATAGTGGACA
CTTGCACTTCGGGTGCAACCGGAGAGGCGGAGGGTGAATCGAGCTCGTCA
TCACGTGCCACCCTGCCTCTTCTTCGACTGTTTGCAGTTTTCACGACCGC
GGCGCTCGTGCTCGAGGCCGTCATAGTGTAGGCGGAGGGTGAATCGAGCT
CGTCATCACGTGCCACCCTGCCTCTTCTTCGACTGTTTGCAGTTTTCACG
ACCGCGGCGCTCGTGCTCGAGGCCGTCATAGTGTAG
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