mRNA_E-fasciculatus_F_contig10493.395.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10493.395.1 vs. uniprot
Match: A0A6H5JGW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW6_9PHAE) HSP 1 Score: 610 bits (1572), Expect = 6.380e-205 Identity = 349/415 (84.10%), Postives = 357/415 (86.02%), Query Frame = 1
Query: 1 GHPPTKREPDWVETVLRSHEASVVDDLSTAFELAETGVSADVVAGGREEMAVXXXXXXXXXXGALLVHGPPGVGKTRLVEALAARLGCRLVKVSPGRLAAVGGVHADRVLSEAFQYCRRCVSRRVVLLLDSIDRLAPAARGNVGASRGEVDAGLLNAFVLAVEQGRRDPRWRGRVAVVGVTSWPDQVHPTARRCAGQEVLVLPPRH-----------------------------------PLRARILSRALLHTGKWEEASADEGGESPDTGPQQDAFAEVVGLCQGFTAGDMCAVAAXXXXXXGSRLPDSDDEGRQTAEEQALARAEALRVGFRQVRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPGAGQ 1140
G PT+ EP WVETVLRSHEASVVDDLS AFELAETGVSAD VAG REEM V XXXXXXGALLVHGPPGVGKTRLVEALAARLGCRLVK+SPGRLAA+GGVHADRVLSEAFQYC RCVSRRVVLLLDSIDRL PAARGNVGASRGEVDAG LNAFVLAVEQGRRDPRWRGRVAVVGVTSWPDQVHPTARRCAGQEVLVLPPRH PLRARILSRALLHTGKWEEA ADEGG+SP T QQDAF EVVGLCQGFTAGDMCAVAAXXXXXX SRLPD+DDEGRQTAE++ALARAEALR GFRQVRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPG G+
Sbjct: 566 GRRPTRGEPVWVETVLRSHEASVVDDLSAAFELAETGVSADGVAGRREEMTVRGGGXXXXXXGALLVHGPPGVGKTRLVEALAARLGCRLVKLSPGRLAAIGGVHADRVLSEAFQYCHRCVSRRVVLLLDSIDRLTPAARGNVGASRGEVDAGKLNAFVLAVEQGRRDPRWRGRVAVVGVTSWPDQVHPTARRCAGQEVLVLPPRHVSSLLFAARTTVAVAVPLSPRPRSIRTPATGERSQPLRARILSRALLHTGKWEEARADEGGKSPATKAQQDAFEEVVGLCQGFTAGDMCAVAAXXXXXXRSRLPDNDDEGRQTAEQRALARAEALRAGFRQVRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPGTGK 980
BLAST of mRNA_E-fasciculatus_F_contig10493.395.1 vs. uniprot
Match: D7FVM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM1_ECTSI) HSP 1 Score: 451 bits (1159), Expect = 2.230e-151 Identity = 268/380 (70.53%), Postives = 271/380 (71.32%), Query Frame = 1
Query: 1 GHPPTKREPDWVETVLRSHEASVVDDLSTAFELAETGVSADVVAGGREEMAVXXXXXXXXXXGALLVHGPPGVGKTRLVEALAARLGCRLVKVSPGRLAAVGGVHADRVLSEAFQYCRRCVSRRVVLLLDSIDRLAPAARGNVGASRGEVDAGLLNAFVLAVEQGRRDPRWRGRVAVVGVTSWPDQVHPTARRCAGQEVLVLPPRHPLRARILSRALLHTGKWEEASADEGGESPDTGPQQDAFAEVVGLCQGFTAGDMCAVAAXXXXXXGSRLPDSDDEGRQTAEEQALARAEALRVGFRQVRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPGAGQ 1140
G PPT EP WVETVLRSHEASVVDDLS AFELAETGVSA VAG REEM V GALLVHGP GVGKTRLVEALAARLGCRLVK+SPGRLAA+GGVHADRVLSEAFQYCRRCVS RVVLLLDSIDRL PAARGNVGASRGEVDAGLLNAFVLAVEQGRRDPR RGRVAVVGVTSWPDQ PLRARILSRALLHTGKWEEASADEGG SP T QQ VRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPG G+
Sbjct: 10 GRPPTLGEPVWVETVLRSHEASVVDDLSAAFELAETGVSASGVAGRREEMTVRGGGGRGGGNGALLVHGPSGVGKTRLVEALAARLGCRLVKLSPGRLAAIGGVHADRVLSEAFQYCRRCVSHRVVLLLDSIDRLTPAARGNVGASRGEVDAGLLNAFVLAVEQGRRDPRCRGRVAVVGVTSWPDQRS-----------------QPLRARILSRALLHTGKWEEASADEGGISPATSAQQ-------------------------------------------------------------VRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPGTGK 311
BLAST of mRNA_E-fasciculatus_F_contig10493.395.1 vs. uniprot
Match: A0A835ZEI6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI6_9STRA) HSP 1 Score: 206 bits (523), Expect = 6.060e-56 Identity = 165/390 (42.31%), Postives = 200/390 (51.28%), Query Frame = 1
Query: 43 VLRSHEASVVDDLSTAFELAETGVSADVVAGGREEMAVXXXXXXXXXXGALLVHGPPGVGKTRLVEALAARLGCRLVKVSPGRLAAVGGVHADRVLSEAFQYCRRCVSRRVVLLLDSIDRLAPAARGNVGASRGEVDAGLLNAFVLAV--------EQGRRDPRWRGRVAVVGVTSWPDQVHPTARRCAGQEVLVLPPRHPLRARIL-----SRALLHTGKWEEASADEGGESPDTGPQQDAFAEVVGLCQGFTAGDM--CAVAAXXXXXXGSR---------LPDSDDEGRQTAEEQALARAEALRVGFRQVRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPGAGQ 1140
VLR H+A ++ L+ FE A ++ D G R A LL+HG GVGKT LV ALAA L CR+V V+ GRLAA GV DR L+ A + R C + RVVLLLD+ DRL PAA+G V A+ G+ DA LLNAF L V VV TS +HP ARRC +E+ V PP LR RIL + A +H + SA +P QGF AGD+ A AA GS P D A E AL RA A V+ VA XXXXXXX + A VPRVRW++V GLERAK A+QEMVVWP + P+ F+R+GI PA+GVLLFGPPG G+
Sbjct: 90 VLRCHDADLITRLTARFERA---LAQDGGGGSRGAAAPPR----------LLLHGSAGVGKTSLVHALAAALRCRVVSVAAGRLAAAAGVDRDRALTRAAAFARACSAPRVVLLLDAADRLLPAAQGRVAATLGDADAALLNAFALLAGGSGAXXXXXXXXXXXXXNSVFVVATTSCLPCLHPEARRCFEEELEVTPPSRQLRERILLDAVAAAAAMHGRLGLQWSAALTAAAPXXXX----------XXQGFAAGDLHAAASAAVLQLMHGSGGITSSPTPPSPSQHDATGAAAAEHALLRAVAA------VQPAVALXXXXXXXXXXDARAEAEVPRVRWADVVGLERAKAALQEMVVWPQQRPDTFARLGIAPAAGVLLFGPPGTGK 450
BLAST of mRNA_E-fasciculatus_F_contig10493.395.1 vs. uniprot
Match: A0A7J3ZIW3_9CREN (AAA family ATPase n=1 Tax=Fervidicoccus fontis TaxID=683846 RepID=A0A7J3ZIW3_9CREN) HSP 1 Score: 119 bits (299), Expect = 8.830e-26 Identity = 95/319 (29.78%), Postives = 153/319 (47.96%), Query Frame = 1
Query: 193 LLVHGPPGVGKTRLVEALAARLGCRLVKVSPGRLAAVGGVHADRVLSEAFQYCRRCVSRRVVLLLDSIDRLAPAARGNVGASRGEVDAGLLNAFVLAVEQGRRDPRWRGRVAVVGVTSWPDQVHPTARRCA--GQEVLVLPPRHPLRARILSRALLHTGKWEEASADEGGESPDTGPQQDAFAEVVGLCQGFTAGDMCAVAAXXXXXXGSR-LPDSDDEGRQTAEEQALARAEALRVGFRQVRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPGAGQ 1140
+L++GPPG GKT L +ALA +G + ++ + + +++ L E F+ + ++ +D ID +AP VG EV+ ++ A +LA+ G ++ RG+V V+G T+ PD + P RR +E+ + PP R IL L+HT A D E ++ + G+T D+ A+ R + D + ++ ++ L + F + V VP VRWS++GGLE AK+A+QE V WP ++PE F +MGI+P G+LLFGPPG G+
Sbjct: 230 VLLYGPPGTGKTLLAKALANEIGAYFISINGPEIMSKFYGESEQRLREVFKEAED--NAPSIVFIDEIDSIAPKREEVVG----EVEKRVV-AQLLALMDGLKE---RGKVVVIGATNRPDAIDPALRRPGRFDREIEIRPPDGRARKEIL---LVHTRNMPLAD-DVNLE------------KLADITHGYTGADLAALVKEAAMHALRRFMKDKKIDWKRPISKEVLKELKVTFADFTAAMKSV--------QPSLLREIYVEVPSVRWSDIGGLEEAKQALQEAVEWPLKYPEVFEKMGISPPRGILLFGPPGTGK 514
BLAST of mRNA_E-fasciculatus_F_contig10493.395.1 vs. uniprot
Match: A0A058Z3F1_FONAL (Uncharacterized protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058Z3F1_FONAL) HSP 1 Score: 116 bits (290), Expect = 1.380e-24 Identity = 111/338 (32.84%), Postives = 154/338 (45.56%), Query Frame = 1
Query: 193 LLVHGPPGVGKTRLVEALAARLGCRLVKVSPGRLAAVGGVHADRVLSEAFQYCRRCVSRR---VVLLLDSIDRLAPA----ARGNVGASRGEVDAGLL------NAFVLAVEQGRRDPRWRGRVAVVGVTSWPDQVHPTARRCA--GQEVLVLPPRHPLRARILSRALLHTGKWEEASADEGGESPDTGP---QQDAFAEVVGLCQGFTAGDMCAVAAXXXXXXGSRLPDSDD--EGRQTAEEQALARAEALRVGFRQ--VRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPGAGQ 1140
+L+HGPPGVGKT LV +A LG L+ V P + + ++R L E F RR + ++ +D ID L PA G+ + V A LL +A A G RG V VV T+ PD V P RR +EV + PP RAR+L RAL+ A+ G P GP + AE+ C GF A D+ A+ RL + G T E L A LR G Q + + +AAG G P + W+++GGL+ K +++ + WP +AF R+G+TP GVLL+GPPG +
Sbjct: 249 VLLHGPPGVGKTHLVRGVALALGALLLPVDPSAVLSSVTGESERRLRECFDRARRFAAESGSPCIIFIDEIDALCPARSLDGSGSASGTTTRVIAQLLTLMDGFHARSDAARVGGPGGCLRGEVVVVAATNRPDAVDPALRRPGRFDREVGIAPPDARARARLL-RALVG------ATLGHGAAPPPGGPAVLEGGFLAELATRCIGFVAADLAALVRAAALRALDRLGAGEPGPSGLLTLEPADLWAA--LRSGEVQPSLIRDMAAG------------VELGAP-ITWADIGGLDSVKHKLRQSIEWPVLHRQAFLRLGLTPPRGVLLYGPPGCSK 564
BLAST of mRNA_E-fasciculatus_F_contig10493.395.1 vs. uniprot
Match: A0A650CNA2_9CREN (CDC48 family AAA ATPase n=2 Tax=Stygiolobus TaxID=41674 RepID=A0A650CNA2_9CREN) HSP 1 Score: 113 bits (283), Expect = 1.080e-23 Identity = 98/318 (30.82%), Postives = 154/318 (48.43%), Query Frame = 1
Query: 193 LLVHGPPGVGKTRLVEALAARLGCRLVKVSPGRLAAVGGVHADRVLSEAFQYCRRCVSRRVVLLLDSIDRLAPAARGNVGASRGEVDAGLLNAFVLAVEQGRRDPRWRGRVAVVGVTSWPDQVHPTARRCA--GQEVLVLPPRHPLRARILSRALLHTGKWEEASADEGGESPDTGPQQDAFAEVVGLCQGFTAGDMCAVAAXXXXXXGSRLPDSDDEGRQTAEEQALARAEALRVGFRQVRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPGAGQ 1140
+L++GPPGVGKT L ALA +G + ++ + + +++ L E FQ + + ++ +D ID +AP G EV+ ++ A +L + G + RG+V V+G T+ PD + P RR +E+ + PP R IL +HT GE D D AE + G+T D+ A+A S L E + E+Q + A+ L+ ++ + A + VP+VRWS++GGL+ K+ ++E WP RFPE F++ GITP G+LLFGPPG G+
Sbjct: 216 ILLYGPPGVGKTLLARALANEIGAYFITINGPEIMSKFYGESEQRLREIFQEAEK--NAPAIIFIDEIDAIAPKREEVTG----EVEKRVV-AQLLTLMDGIKG---RGKVIVIGATNRPDDIDPALRRPGRFDREIEIRPPDTKGRKEILQ---VHTRNMPL------GEDVDL----DKLAE---MTYGYTGADLAALAKEAAI---SALRRFIQEKKLNLEQQTIP-ADILKELKVTMQDFLDAMKSIQPSLLREV--YVEVPKVRWSDIGGLDDVKQQLREAAEWPLRFPELFTKSGITPPKGILLFGPPGTGK 501
BLAST of mRNA_E-fasciculatus_F_contig10493.395.1 vs. uniprot
Match: A0A088E8L0_9CREN (AAA family ATPase, CDC48 subfamily n=9 Tax=Metallosphaera TaxID=41980 RepID=A0A088E8L0_9CREN) HSP 1 Score: 112 bits (281), Expect = 1.970e-23 Identity = 95/322 (29.50%), Postives = 147/322 (45.65%), Query Frame = 1
Query: 193 LLVHGPPGVGKTRLVEALAARLGCRLVKVSPGRLAAVGGVHADRVLSEAFQYCRRCVSRRVVLLLDSIDRLAPAARGNVGASRGEVDAGLLNAFVLAVEQGRRDPRWRGRVAVVGVTSWPDQVHPTARRCA--GQEVLVLPPRHPLRARILSRALLHTGKWEEASADEGGESPDTGPQQDAFAEVVGLCQGFTAGDMCAVAAXXXXXXGSRLPDSDDEGRQTAEE----QALARAEALRVGFRQVRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPGAGQ 1140
+L++GPPGVGKT L ALA +G V ++ + + +++ L E F + + ++ +D ID +AP G EV+ +++ + ++ + RGR+ V+G T+ PD V RR +E+ + PP R IL +HT AD+ D AE + G+T D+ A+A R ++ D + +E + L + F + V VPRVRWSE+GGLE K+ ++E + WP RFPE F++ GI P GVLLFGPPG G+
Sbjct: 221 VLLYGPPGVGKTLLARALANEIGAYFVTINGPEIMSKFYGESEQRLREIFDDADK--NAPSIIFIDEIDAIAPKREEVTG----EVEKRVVSQLLTLMD----GIKGRGRIVVIGATNRPDAVDQALRRPGRFDREIEIRPPDTKARKEILQ---VHTRNMP--LADD--------VNLDVIAE---MTNGYTGADIAALAKEAAMHALRRFINTGDRKKLLEQERLSPEVLKELKVTMDDFMNAMKFV--------QPTLLREVYVEVPRVRWSEIGGLENVKQQLREAIEWPMRFPEVFNKAGIRPPKGVLLFGPPGTGK 508
BLAST of mRNA_E-fasciculatus_F_contig10493.395.1 vs. uniprot
Match: A0A662I103_9CREN (AAA family ATPase n=4 Tax=Thermoprotei archaeon TaxID=2250277 RepID=A0A662I103_9CREN) HSP 1 Score: 108 bits (271), Expect = 3.770e-22 Identity = 91/323 (28.17%), Postives = 146/323 (45.20%), Query Frame = 1
Query: 193 LLVHGPPGVGKTRLVEALAARLGCRLVKVSPGRLAAVGGVHADRVLSEAFQYCRRCVSRRVVLLLDSIDRLAPAARGNVGASRGEVDAGLLNAFVLAVEQGRRDPRWRGRVAVVGVTSWPDQVHPTARRCA--GQEVLVLPPRHPLRARILSRALLHTGKW---EEASADEGGESPDTGPQQDAFAEVVGLCQGFTAGDMCAVAAXXXXXXGSRLPDSD--DEGRQTAEEQALARAEALRVGFRQVRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPGAGQ 1140
+L+HGPPG GKT L +A+A G + ++ + + ++ L E F+ + ++ +D ID +AP G EV+ ++ A +L + G R+ RG V V+ T+ PD V P RR +E+ + P R IL L+HT ++ + DE E + G+T D+ A+ R D + T + L + + R F + + V + VP VRWS++GGLE+ K+ ++E+V WP ++P F+ +GI P GVLLFGPPG G+
Sbjct: 220 VLLHGPPGCGKTLLAKAVANEAGAYFIAINGPEIMSKFYGESEARLREIFKEAEE--NAPAIIFIDEIDAIAPKREEVTG----EVEKRVV-AQLLTLMDGLRE---RGNVIVIAATNRPDAVDPALRRPGRFDREIAIGMPDKRARKEIL---LVHTRNMPLADDVNLDEIAE----------------MTHGYTGADLAALCREAAMAALRRAISKGMIDLEKPTIPAEVLEQLQVTRADFMEALKYV--------QPSVLREVIVEVPEVRWSDIGGLEKVKQELREIVEWPLKYPHYFNEVGIEPPKGVLLFGPPGTGK 505
BLAST of mRNA_E-fasciculatus_F_contig10493.395.1 vs. uniprot
Match: UPI000A68BDAA (AAA family ATPase n=1 Tax=Caldivirga sp. MU80 TaxID=1650354 RepID=UPI000A68BDAA) HSP 1 Score: 106 bits (265), Expect = 4.710e-22 Identity = 95/324 (29.32%), Postives = 146/324 (45.06%), Query Frame = 1
Query: 187 GALLVHGPPGVGKTRLVEALAARLGCRLVKVSPGRLAAVGGVHADRVLSEAFQYCRRCVSRRVVLLLDSIDRLAPAARGNVGASRGEVDAGLLNAFVLAVEQGRRDPRWRGRVAVVGVTSWPDQVHPTARRCA--GQEVLVLPPRHPLRARILSRALLHTGKWE-EASADEGGESPDTGPQQDAFAEVVGLCQGFTAGDMCAVAAXXXXXXGSRLPDS---DDEGRQTAEEQALARAEALRVGFRQVRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPGAGQ 1140
G LL+ GPPG GKT L +A+A V ++ + + ++ L E F +R + ++ +D ID +AP G EV+ ++ A +L + G ++ RG+V V+G T+ PD V P RR +E+ + PP R IL L+HT E D ++ + G+T D+ A+A R + E T ++ L+R + F + + VP+VRWS+VGGLE AK+ ++E V WP ++P F MGI P G+LLFGPPG G+
Sbjct: 41 GVLLI-GPPGTGKTLLAKAVANEADAYFVSINGPEIVSKYYGESEARLREIFDEAKR--NAPAIIFIDEIDSIAPKREEVTG----EVEKRIV-AQLLTLMDGLQE---RGQVVVIGATNRPDAVDPALRRPGRFDREIWINPPDTRGRYEIL---LVHTRNMPLEKDVD--------------LRKLAEITYGYTGADIAALAREAAMKALRRALQQGIINPEDPNTFTDENLSRIKVTMQDFMDAMREI--------IPSALREIYIEVPKVRWSDVGGLEEAKQELREAVEWPLKYPNRFKVMGIKPPKGILLFGPPGTGK 328
BLAST of mRNA_E-fasciculatus_F_contig10493.395.1 vs. uniprot
Match: A0A662U524_9CREN (AAA family ATPase (Fragment) n=1 Tax=Thermoprotei archaeon TaxID=2250277 RepID=A0A662U524_9CREN) HSP 1 Score: 107 bits (268), Expect = 6.090e-22 Identity = 89/319 (27.90%), Postives = 145/319 (45.45%), Query Frame = 1
Query: 193 LLVHGPPGVGKTRLVEALAARLGCRLVKVSPGRLAAVGGVHADRVLSEAFQYCRRCVSRRVVLLLDSIDRLAPAARGNVGASRGEVDAGLLNAFVLAVEQGRRDPRWRGRVAVVGVTSWPDQVHPTARRCA--GQEVLVLPPRHPLRARILSRALLHTGKWEEASADEGGESPDTGPQQDAFAEVVGLCQGFTAGDMCAVAAXXXXXXGSRLPDSDD-EGRQTAEEQALARAEALRVGFRQVRQRVAAGRGXXXXXXXXXASVAGVPRVRWSEVGGLERAKRAVQEMVVWPARFPEAFSRMGITPASGVLLFGPPGAGQ 1140
+L+HGPPGVGKT L +ALA +G + ++ + + ++ L E F+ + + ++ +D ID +AP VG EV+ ++ A +L + G ++ RGR+ V+G T+ D V P RR +E+ + PP R IL + E+ + +E E L G+T D+ A+ R ++ + + L + + + F + V + VP VRW ++GGLE K+ ++E + WP R PE F +MGI P GVLL+GPPG G+
Sbjct: 222 ILLHGPPGVGKTLLAKALANEIGAYFIAINGPEIMSKFYGESEARLREIFEEAEK--NAPAIIFIDEIDAIAPKREEVVG----EVEKRVV-AQLLTLMDGLKE---RGRIIVIGATNRIDAVDPALRRPGRFDREIEIPPPDKRARRAILEVHTRNVPLDEDVNLEEIAE----------------LTHGYTGADLAALVKEAAMAALRRFLRTEKVDLNKPIPPDMLKKLKVTKKDFLDAMKIV--------HPTLMREVLVEVPEVRWEDIGGLEDVKQQLREAIEWPLRSPEIFEKMGIRPPRGVLLYGPPGCGK 506 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10493.395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10493.395.1 >prot_E-fasciculatus_F_contig10493.395.1 ID=prot_E-fasciculatus_F_contig10493.395.1|Name=mRNA_E-fasciculatus_F_contig10493.395.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=380bp GHPPTKREPDWVETVLRSHEASVVDDLSTAFELAETGVSADVVAGGREEMback to top mRNA from alignment at E-fasciculatus_F_contig10493:90..4337+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10493.395.1 ID=mRNA_E-fasciculatus_F_contig10493.395.1|Name=mRNA_E-fasciculatus_F_contig10493.395.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4248bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10493:90..4337+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10493:90..4337+ >mRNA_E-fasciculatus_F_contig10493.395.1 ID=mRNA_E-fasciculatus_F_contig10493.395.1|Name=mRNA_E-fasciculatus_F_contig10493.395.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2280bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10493:90..4337+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |