mRNA_E-fasciculatus_F_contig10483.385.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10483.385.1
Unique NamemRNA_E-fasciculatus_F_contig10483.385.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10483.385.1 vs. uniprot
Match: A0A6H5L2D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2D8_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 1.790e-106
Identity = 185/227 (81.50%), Postives = 193/227 (85.02%), Query Frame = 1 
Query:  547 FVLLVASGSAGI*EWLVNLLCRCACFLPCASRRLLKRDLNKQERASDAGMKSAAMGVIPFKVNDDLRAQLQTFGAGGGDVDWIEMRMDGEEITLVGAKTIAELADLQELINEEEPRFILLRRDDSKFLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAGGXXXXXXEATTISPPVPSVARPSRPGRGRARLTKRS 1227
            F  LVAS  AG  + L++               LLKRDLNKQERASDAGMKSAAMGVIPFKV  DLRAQLQTFG+GGGDVDWIEMRMDGEEI LVGAKTIAE+ADL+ELI+EEEPRFILLRRD SKFLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAG       E TTISPPVP+VARPSRPGRGRARLTKRS
Sbjct:   42 FESLVASRRAGSGDQLLS------------EAELLKRDLNKQERASDAGMKSAAMGVIPFKVKGDLRAQLQTFGSGGGDVDWIEMRMDGEEIALVGAKTIAEVADLEELIDEEEPRFILLRRDHSKFLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAGREGGVGGEGTTISPPVPAVARPSRPGRGRARLTKRS 256
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10483.385.1 vs. uniprot
Match: A0A835YYH4_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYH4_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.270e-31
Identity = 84/194 (43.30%), Postives = 118/194 (60.82%), Query Frame = 1 
Query:  640 RRLLKRDLNKQERASDAGMKSAAMGVIPFKVNDDLRAQLQTFGAGGGDVDWIEMRMDGE-EITLVGAKTIAELADLQELINEEEPRFILLRRDDSKFLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAGGXXXXXXEATTISPPVPSVARPSRPGRGRARLT 1218
            R ++++++ +Q R  D   KS AMGVIPF+  D+LR QL+ F AG   V+W+ M +  +  I L  A+T+   + L   ++  EPRF LL+  D+ F VYSCPE + VRLKMTYS+++ASVVAA A AG       E     EI+EA+A+ ++G  + A  G      +A     P+PS  +PSRPGRGR RLT
Sbjct:   34 REVIQKEMARQAR--DITAKSTAMGVIPFEATDELRRQLEAFKAGA--VNWVGMAVTADGAIGLGEARTVDVKSSLAPHVDAAEPRFYLLQHGDTAFFVYSCPEGAPVRLKMTYSTARASVVAAVAAAGTDCSKSFECGGPEEIEEALAYELKGVADGANAGALSAAADA-----PLPS--KPSRPGRGRGRLT 216
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10483.385.1 vs. uniprot
Match: A0A835YV51_9STRA (ADF-H domain-containing protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV51_9STRA)

HSP 1 Score: 132 bits (332), Expect = 3.790e-30
Identity = 84/194 (43.30%), Postives = 118/194 (60.82%), Query Frame = 1 
Query:  640 RRLLKRDLNKQERASDAGMKSAAMGVIPFKVNDDLRAQLQTFGAGGGDVDWIEMRMDGE-EITLVGAKTIAELADLQELINEEEPRFILLRRDDSKFLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAGGXXXXXXEATTISPPVPSVARPSRPGRGRARLT 1218
            R ++++++ +Q R  D   KS AMGVIPF+  D+LR QL+ F AG   V+W+ M +  +  I L  A+T+   + L   ++  EPRF LL+  D+ F VYSCPE + VRLKMTYS+++ASVVAA A AG       E     EI+EA+A+ ++G  + A  G      +A     P+PS  +PSRPGRGR RLT
Sbjct:  150 REVIQKEMARQAR--DITAKSTAMGVIPFEATDELRRQLEAFKAGA--VNWVGMAVTADGAIGLGEARTVDVKSSLAPHVDAAEPRFYLLQHGDTAFFVYSCPEGAPVRLKMTYSTARASVVAAVAAAGTDCSKSFECGGPEEIEEALAYELKGVADGANAGALSAAADA-----PLPS--KPSRPGRGRGRLT 332
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10483.385.1 vs. uniprot
Match: A0A7S2HAE2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HAE2_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.150e-21
Identity = 66/190 (34.74%), Postives = 106/190 (55.79%), Query Frame = 1 
Query:  685 DAGMKSAAMGVIPFKVNDDLRAQLQTFGAGGGDVDWIEMRMDGEEITLVGA----KTIAELADLQELINEEEPRFILLRRDDSK--------FLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAGGXXXXXXEATTISPPVPSVARPSRPGRGRARLT 1218
            D   +S+AM  I F + DD+RAQ++ F    G+V  IE+ +   E   +G+    +  A L  + EL++  EPRF+L++  +S         F VYSCPEE+A+R+KMTYSS+K++++A  AE G+ +D  +E+    +I+ A++          +GG       A        S ++P RPG+GRARL+
Sbjct:  176 DTSTRSSAMAAIAFPIEDDVRAQIKEFLT--GNVTVIELTLTTTETVGLGSAHSIEPSAVLGQISELVSNTEPRFLLVKHPNSSSDVAPTSTFFVYSCPEEAALRMKMTYSSAKSTIIAETAEEGIKIDKALEVNDTKDIEAAISSEATAQSADDSGGNAPLKHAA--------SESKPRRPGKGRARLS 355
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10483.385.1 vs. uniprot
Match: A0A7S3HH81_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH81_9STRA)

HSP 1 Score: 105 bits (263), Expect = 5.450e-21
Identity = 75/196 (38.27%), Postives = 105/196 (53.57%), Query Frame = 1 
Query:  637 SRRLLKRDLNKQERASDAGMKSAAMGVIPFKVNDDLRAQLQTFGAGGGDVDWIEMRMDGEEITLVGAKTIAELADLQELINEEEPRFILLR------RDDSKFLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHA--VRGSKEHAAGGXXXXXXEATTISPPVPSVARPSRPGR 1200
            S RL+  +  +Q +A  A  KS+A+ V+PF +  ++  QL  F    G  +W+EM +  E I+LVG +++     LQ  I+ E   FI L+        D    ++SCPE S VR+KMT SSSKASV+AAA + G+T D  +EIR A+E+DEAV  A   R +     GG           S    S  +P RPGR
Sbjct:  153 SERLVLEE-KQQVQAESAVSKSSALSVLPFAMTSEVTEQLNAFKE--GTCNWVEMTITNEIISLVGFRSVTADDSLQSFIDTENASFIALKLPKGEESGDISLFIFSCPENSPVRVKMTMSSSKASVLAAAQQLGITFDKTLEIRDADEVDEAVRSARFPRATDSPVPGGS----------SAAAGSHGKPQRPGR 335
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10483.385.1 vs. uniprot
Match: W4H6K0_9STRA (ADF-H domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6K0_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.410e-16
Identity = 70/200 (35.00%), Postives = 102/200 (51.00%), Query Frame = 1 
Query:  628 PCASRRLLKRDLNKQERASDAGMKSAAMGVIPFKVNDDLRAQLQTFGAGGGDVDWIEMRMDGEEITLVGAKTIAELADLQELINEEEPRFILLRR--DD---SKFLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAGGXXXXXXEATTISPPVPSVARPSRPGRGRAR 1212
            P + R +L ++    ER  D  +KS+AM V+PF ++      L  F   G    W+ MRM  EE+ +  +  I     +  L+++E+P F+L R   DD   + F VY CPE + VRLKMTYS++KAS++      G+ VD  +E+  A  + EA+      S +H          E     P V   ARP+ PGRGRAR
Sbjct:  142 PLSDREVLLKEEALLER--DLSVKSSAMNVLPFGMSAACDTALIAFSKKGTSSTWLSMRMTNEELVVDASVHITRDDQINALVDKEQPSFVLYRSLVDDPTPTTFFVYICPEAANVRLKMTYSTAKASLLHDLQRRGILVDSTIEVTDAWNVLEALQG---NSSKH----------EHDDGHPKV--FARPAAPGRGRAR 324
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10483.385.1 vs. uniprot
Match: A0A8K1FEY0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEY0_PYTOL)

HSP 1 Score: 84.0 bits (206), Expect = 1.040e-13
Identity = 61/192 (31.77%), Postives = 97/192 (50.52%), Query Frame = 1 
Query:  685 DAGMKSAAMGVIPFKVNDDLRAQLQTFGAGGGDVDWIEMRMDGEEITLVGAKTI--AELADLQELINEEEPRFILLR-------RDDSKFLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIR---AANEIDEAVAHAVRGSKEHAAGGXXXXXXEATTISPPVPSVARPSRPGRGRARLTKR 1224
            D  ++S AMGVIPF ++ ++R +L       G  DWI M+++ E+ ++   K++   +L D+Q +I+++ P F+  R          S   +Y CPE++ VRLKM YS++KA+++A   E G+T D  +EI     A E   A    V+  ++  A                    ARP  PGRGR R  +R
Sbjct:  161 DTNIRSTAMGVIPFGISQNVRDKLTLLK--DGKFDWIAMKLNTEDESVEVVKSVESVDLIDVQSVIDQKNPSFVAYRPPPTASASSPSLLFLYVCPEDAPVRLKMVYSTAKATILATTTELGLTFDKTIEINNPLTATEDIRAELAPVKVEEDVKAR-----------------EFARPVAPGRGRGRGPRR 333
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10483.385.1 vs. uniprot
Match: A0A2D4CCP6_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCP6_PYTIN)

HSP 1 Score: 84.0 bits (206), Expect = 8.190e-13
Identity = 57/182 (31.32%), Postives = 92/182 (50.55%), Query Frame = 1 
Query:  685 DAGMKSAAMGVIPFKVNDDLRAQLQTFGAGGGDVDWIEMRM--DGEEITLVGAKTIAELADLQELINEEEPRFILLRRDDSKFLV----YSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAGGXXXXXXEATTISPPVPSVARPSRPGRGRAR 1212
            D  ++S AMGVIPF+++ +LR +L  F    G  DWI M++  D E + +V +    EL D+ + I+ + P F+  R       V    Y CPE++ +RLKM YS++KA+++A  +E G+     VE+   + + + V   +   K             A   +      +RP+ PGRGR R
Sbjct: 1132 DTNVRSTAMGVIPFRISQNLRDKLALFK--DGKFDWIAMKLNTDDESVDVVKSLEKVELVDVHDAIDHKTPSFVAYRYRSVTATVLVFLYVCPEDAPIRLKMVYSTAKATILATTSELGIEFVKTVEVNNPHTVVDDVRAELAPPK-------------ADDDAARTREFSRPAAPGRGRGR 1298
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10483.385.1 vs. uniprot
Match: A0A2R5GMV4_9STRA (Twinfilin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMV4_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.820e-13
Identity = 59/199 (29.65%), Postives = 105/199 (52.76%), Query Frame = 1 
Query:  637 SRRLLKRDLNKQERASDAGMKSAAMGVIPFKVNDDLRAQLQTFGAGGGDVDWIEMRMDGEEITLVGAKTIAELADLQELINEEEPRFILLRRDDSK---FLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAGGXXXXXXEATTISPPVPSVARPSRPGRGRARLTKR 1224
            S  L K ++ +    S+A  ++ AMG++PF   DD+ A L+ F A  G VD +E  ++G+    +G +T          I   EPRF L+R+ D+    + ++SCPE + +R++M YS+ KA++     E G+ +  + E+   ++ID+ +   +  + + +AG                 + A+PSRPGRG+AR+ K+
Sbjct:  150 SELLAKEEVAQMAPPSEA--RANAMGLVPFDFTDDVEAALEGFRA--GSVDLVEFVIEGDSTVALG-ETSPSTRLSSSTIATSEPRFYLVRQVDTSNNVYYIFSCPEGTKIRVRMLYSTCKATLAHHIDELGIELTKVFELGDPSDIDDLLK--MYDTPDESAGKIKQA------------NYAKPSRPGRGKARIMKK 329
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10483.385.1 vs. uniprot
Match: A0A485LD04_9STRA (Aste57867_19609 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD04_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.330e-12
Identity = 62/201 (30.85%), Postives = 101/201 (50.25%), Query Frame = 1 
Query:  628 PCASRRLLKRDLNKQERASDAGMKSAAMGVIPFKVNDDLRAQLQTFGAGGGDVDWIEMRMDGEEITLVGAKTIAELADLQELINEEEPRFILLRRDDSK------FLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAGGXXXXXXEATTISPPVPSVARPSRPGRGRAR 1212
            P + R +L ++    ER  D  +K++AM V+PF +  D RA L  F        W+ +R+  EE+T+  +        +   + ++ P F++ R   S         +Y CPEE+ VRLKMTYS++KAS+++   + G+ VD M+EI   + + +++ HA   S              A   + P  S +RP+ PGRGR R
Sbjct:  142 PLSEREVLLKEEAALER--DLSVKASAMNVMPFGLTADCRAALDAFTKDTAS-RWLSLRIKDEELTVGSSIPNMHEDQVNSAVEKQTPSFVVYRYTGSAVDGPTTLFLYVCPEEANVRLKMTYSTAKASLLSDLQQRGIKVDKMIEITDTSNVLDSI-HADFASAA----------VTADEDNRPK-SFSRPAAPGRGRGR 327
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10483.385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2D8_9PHAE1.790e-10681.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYH4_9STRA2.270e-3143.30ADF-H domain-containing protein n=1 Tax=Tribonema ... [more]
A0A835YV51_9STRA3.790e-3043.30ADF-H domain-containing protein n=3 Tax=Tribonema ... [more]
A0A7S2HAE2_9STRA1.150e-2134.74Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3HH81_9STRA5.450e-2138.27Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
W4H6K0_9STRA2.410e-1635.00ADF-H domain-containing protein n=6 Tax=Aphanomyce... [more]
A0A8K1FEY0_PYTOL1.040e-1331.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CCP6_PYTIN8.190e-1331.32Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A2R5GMV4_9STRA9.820e-1329.65Twinfilin n=1 Tax=Hondaea fermentalgiana TaxID=231... [more]
A0A485LD04_9STRA1.330e-1230.85Aste57867_19609 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10483contigE-fasciculatus_F_contig10483:188..4848 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score84.7
Seed ortholog evalue4.7e-14
Seed eggNOG ortholog36331.EPrPI00000013977
KEGG koko:K08870
EggNOG free text desc.Twinfilin. Source PGD
EggNOG OGs1MBSU@121069,KOG1747@1,KOG1747@2759
COG Functional cat.W
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categoryother localisation
Exons5
Model size2317
Cds size537
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927545.674735-UTR-E-fasciculatus_F_contig10483:187..12741622927545.674735-UTR-E-fasciculatus_F_contig10483:187..1274Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10483 188..1274 -
1695995588.4122262-UTR-E-fasciculatus_F_contig10483:187..12741695995588.4122262-UTR-E-fasciculatus_F_contig10483:187..1274Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10483 188..1274 -
1622927545.7356737-UTR-E-fasciculatus_F_contig10483:4155..48481622927545.7356737-UTR-E-fasciculatus_F_contig10483:4155..4848Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10483 4156..4848 -
1695995588.4906306-UTR-E-fasciculatus_F_contig10483:4155..48481695995588.4906306-UTR-E-fasciculatus_F_contig10483:4155..4848Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10483 4156..4848 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927545.6852267-CDS-E-fasciculatus_F_contig10483:1274..14631622927545.6852267-CDS-E-fasciculatus_F_contig10483:1274..1463Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10483 1275..1463 -
1695995588.424193-CDS-E-fasciculatus_F_contig10483:1274..14631695995588.424193-CDS-E-fasciculatus_F_contig10483:1274..1463Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10483 1275..1463 -
1622927545.694722-CDS-E-fasciculatus_F_contig10483:2267..23831622927545.694722-CDS-E-fasciculatus_F_contig10483:2267..2383Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10483 2268..2383 -
1695995588.435046-CDS-E-fasciculatus_F_contig10483:2267..23831695995588.435046-CDS-E-fasciculatus_F_contig10483:2267..2383Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10483 2268..2383 -
1622927545.7073653-CDS-E-fasciculatus_F_contig10483:2990..30331622927545.7073653-CDS-E-fasciculatus_F_contig10483:2990..3033Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10483 2991..3033 -
1695995588.450697-CDS-E-fasciculatus_F_contig10483:2990..30331695995588.450697-CDS-E-fasciculatus_F_contig10483:2990..3033Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10483 2991..3033 -
1622927545.7170162-CDS-E-fasciculatus_F_contig10483:3309..33901622927545.7170162-CDS-E-fasciculatus_F_contig10483:3309..3390Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10483 3310..3390 -
1695995588.4596498-CDS-E-fasciculatus_F_contig10483:3309..33901695995588.4596498-CDS-E-fasciculatus_F_contig10483:3309..3390Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10483 3310..3390 -
1622927545.726196-CDS-E-fasciculatus_F_contig10483:4047..41551622927545.726196-CDS-E-fasciculatus_F_contig10483:4047..4155Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10483 4048..4155 -
1695995588.4773939-CDS-E-fasciculatus_F_contig10483:4047..41551695995588.4773939-CDS-E-fasciculatus_F_contig10483:4047..4155Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10483 4048..4155 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10483.385.1prot_E-fasciculatus_F_contig10483.385.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10483 1275..4155 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10483.385.1

>prot_E-fasciculatus_F_contig10483.385.1 ID=prot_E-fasciculatus_F_contig10483.385.1|Name=mRNA_E-fasciculatus_F_contig10483.385.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=179bp
MKSAAMGVIPFKVNDDLRAQLQTFGAGGGDVDWIEMRMDGEEITLVGAKT
IAELADLQELINEEEPRFILLRRDDSKFLVYSCPEESAVRLKMTYSSSKA
SVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAGGGGGAGGE
ATTISPPVPSVARPSRPGRGRARLTKRS*
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mRNA from alignment at E-fasciculatus_F_contig10483:188..4848-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10483.385.1 ID=mRNA_E-fasciculatus_F_contig10483.385.1|Name=mRNA_E-fasciculatus_F_contig10483.385.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4661bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10483:188..4848- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTAATTTTAAACACCCTTGAGCGAATTCCGGAGCTGTAAAGCTGCGCACG
AATCGATCGTTTAGCCTCCCCTTTCCTACTTTGGATCACCTTGTTAGCAG
GTCGGGTGAATTCCGTTTGGCCTGTGTCAGTGGGAAATCGATTGAACTTT
TTTTTTTGTGGGGACTGACTGCGGAATCCTGACCAAGCAGTAGACAGCCA
CACCCGCGTTCGTGCTTCTCCGTGGTTGCAGCCCCGCTAGTTTCGGCAGC
GGCCTGACCCAAACGTGTCTCCTCGCCTTGTCGTGAGCAAGCTTGTCCGC
CGCCTGAAGGTCCGTCGTGATCGTTATGCTTTTAGACCCGGTCGTGTGGT
TGCCGGTGACGTGATGCTCATCCTGCTCTGTGCCGACGAGCACCGGGCAG
ACGAGCGGAAAGAGCGTAGTACAAGCTACCAATCGTTGTAGACTAGTCTA
TGCTGGGAACGCTCACTTTCTCGTACATACATACATATGCATTGGGTTTA
TTTTTATGATTCAAGAGCTCGGCTGGGGGGTTGGGGCTCGACCGTTTTTG
TCCTTTTGGTTGCTTCTGGCTCGGCCGGAATTTGAGAGTGGCTCGTGAAC
CTTCTCTGTCGTTGTGCTTGCTTTCTACCATGTGCTTCGCGCAGGCTGCT
GAAGCGAGATCTCAACAAGCAGGAGAGGGCGAGCGATGCGGGAATGAAGT
CGGCCGCGATGGGAGTGATTCCGTTCAAGGTCAACGACGACCTCAGGGCA
CAGCTCCAAACGTTCGGCGCTGGCGGGGGTGACGTGGATTGGATTGAGAT
GGTACGTTGTTGGTATTTCGAGCTGTAGGGTGTCGTCACGATGCTGCGGC
TGCTACCATCGATCCGGCTCAGTTGCTGCAACGATGAGTTCTCTCTAGGA
TATTTTCATGTTCGTTTTGCCACTGCTACGAGAGGGTCCAGTAGGCTCTC
AACTCAGCTCAAGCATATATTCGTTGTGTGCAAGGCATTCCTTGTGTGCT
TGTTTTCCGTGAGCAAGCTTGTCGCTGGAGCTTTACGATCGGGAACGGGG
AACGGGGAACGGGCGCCTGAAAATCTAACCCACGATGTTTGTGTGGGGCT
GGAGTCGCATGATCTTCTGACCTGCGGCATCCACGTGTACAGCAGCACCG
CGGTTAGCTGTCTTTGTTCGCGTTTTCGCTGGGTACAGTATGGGAGTGCT
CGCCGAAGTAGTGGGTGTTCTGCTTTGCCTAGAATGCAATGCAGTGGTTT
GGGGACGCACAGATACGAGCAGCACCCCCACTTCGCGCCTGCTGATGGAA
GTGATTTTCGACGCCGTGCCTACTGTTGCAGTGCCACGCGCCGTGTGTAC
TAGAGCGGCACATGGGGCTACGTACGTGCAACAATAATTATGTAGCCGTT
TGTCTTCGATGTGGTCTGTCTGTCCACCCTCTGCTTGGTGGAATGCAATG
TCGCGCAGCGCATGGATGGCGAGGAGATTACTCTCGTGGGTGCCAAGACC
ATCGCCGAGCTCGCCGATCTGCAAGAGCTGATTAACGAGGTACGATTCTG
CTGTACCAGGCCTCCCCCTCGCACGGTCTCAGTCGCGTGTGCCCGCTCTC
ACCAGGAGACTCGGTGTAACATCACCTGATCTGACTTCGTCCTCTGTACG
TACCATCACAGCCATGCCCCTGGTGGCTCCAACAAGTGTTCAGCTTACAC
CACGACCGCACTGACATGTAGTCCCGGCGGCGACATCTTGACGAGCCTGT
CTCCTTCCTTCTTGCCTTCTTTCCTTCTTTCTCTTTTCCGCTGCCTCCAC
CGCTGTTTACGGCAGGAGGAGCCACGATTTATTCTCCTGCGTCGGGATGA
CTCGAAATGTAAGAGGCGCCCCTTTTGGGCGGGTGGCGTGTTTTGAGGGG
CCGGGGGTGTGGGGGGTCGGCGTACTCTTATGTTTTGCATGCCTTAGCGG
TTCGACAGTTGACCACGCGTCCTCGAGACAACTGAGCGTTGTTCCCACAG
CACCGAGCATCGATGTCTAATCGTTCCTTCCTGGACCGAGGGTGGTGGGA
GTGAAATTGGTTGTCGTCGTAGATAGCCACTAGAATTCTGCGGGAACATT
AATTTCCGTCGAATTTGAGATGGGGAGCACCCTGGAGCAAGCCGAGCTCT
CACGATAGTGCTACGTACGTACGTACGTACGTACGCGTCTTTTTCTGCTC
TGGTGCGCGAAAGCCGGCACCGACAGCAGGTCCAAAGTGCCTATTTTTGC
AAGTTTTTACCTACGTGCCTTTCGCTGTCTCCTGTTGCGCGCCCCATGCC
TTTACAGTAGGTCCAAACTCGGCCTGCGATTGTCAAGGGGGGCACGCTGA
GATCAATTGCCGCCTCTCTCTCTCTCTTTGTGGCTCACCCCCCTGCTCTC
TCGTATCGCGCACCGTTCTCCTCCGAACGCCGCGTCTTGCTTCTGATCCG
CCAACGATGAAGCAGTCCTGGTGTATAGCTGCCCGGAAGAGTCGGCGGTG
AGGTTGAAGATGACGTATTCTTCCAGCAAGGCCAGCGTCGTTGCCGCGGC
CGCAGAAGCGGGGGTCACTGTCGACCACATGGTGAGTGTTCGAATTGTCT
GCATATGCCCCCTCCCTACTAGTTTACCGCTGTCGACCACATGATGTGTG
TATTGTTTGTCTTCATGTGTCTCACCTCTACATAGATATATTTCCTACCG
TAATTTCGATGCATGTATGTTTTTTTTCCGTTGATTTTTTCCGTTTGGTT
TCGGCGACGTCGGTCGAGCTTTGACTATGTATGACCAATCATCGACAACT
AGACGAAAGAGAGGAAAAATGAAAAGGAGTAGAAACAGCTAAACCTACTC
GACACAGTCTCTGTTCGTCTAGACTACCTATACTATAGAGCATCTGGCTG
CACAGAGCTGAGCGTCGCGACGGTTGGTAAACTATGATATGCATGTGACG
ATCAGTCGTTTTTCGGCTGGAGTGCGAGACCAAAGTTGAGTCTGCGGTGC
CGGCGTTGGACGTCTTGCCTTGGAGAACGACAACGCGGGCAGTAGCAATT
AAGCGCTGTTCTGGGGGCTGCACTCTATCCCACTCCCCTCTTTTTTCCAG
ATCTCTCCCACGCTCTTTCTCTGTGTTACCTAGCGCGATATGTTCCCCCC
CGCGAACTGGAGAAGTGGTTTGAAGCTTGAGTATTGCCCGATCAACTGTT
TGGGCAAAATGGCCCCTTGTTTTACATCGCACGTGCCATACCTAAGCTTC
ATATCAAGCATCTTGAGTTGTAACCCAGAGAACCTCGGAAATGCTCGTCT
TCACACAATCCAACAAAGTCATCCATGCACCTAGACAAGGAGCAAACCAC
ACACACACACTCCCAACCCCCCGTTGGTCTGCCAGGTGGAGATTCGCGCT
GCCAACGAAATAGACGAGGCAGTCGCGCATGCTGTTCGTGGAAGCAAGGA
GCACGCTGCGGGGGGGGGCGGGGGGGCGGGGGGGGAGGCCACCACGATAA
GCCCCCCCGTGCCCTCGGTAGCTCGACCTAGCAGACCTGGACGGGGAAGG
GCGAGGCTCACGAAGCGATCGTAGATAGCTGATGCTACTGCTTGTCTCGA
TAGATTTTGTGTGGATAGGAAGGAGTGGTGTGGCGCAGGGCGTTCTGGTT
TGCTCGATGCAAAATATTGGTGGGTGACAACGCGTAAACGTGTGAGATAA
ATGGCGGCATGAAGAGTCGGCGGTGAACGTGCGTACCTCCCGTTGCTGGT
GTGTTGGCTGGAGGGGCTTGGCGGCGTGGGATAACGAAACGAAGCCGGCG
TACTGTAGAGTTGTTGTTGTTATTGTCTTCACATAAAAAAACGGTGTCCG
CTCAGTACCTTCTAGTGTCCTTACTATTACTAGTGGTCCAACTGACGCGG
ACAGAGCAGAAAAGAAGTACAGTACCCGCGAGGCCATGAGGTATGGGCAA
GCTTGGTGTGGGCCGGCAAGGGGTTCCGTTATTCGTGGGGATCTATGCAT
ACGGTGCGTCGGACTTTAGTAGGACGAGGAAAAGCCGGGATACGGAAGCG
ACTCAGGAGCACAAGCAAGCGTTTAAACGTGTTTGTGTGTGCGTTGTGCG
TTATTGGAGTTCAACCAAGACCAACCGCAATCTCGGCCTGTCGGAGCAGG
ACTCTGAGTCCTCGTTCAATCCTCAATGTTTTCAGTTGTCATGTGTGAGC
TGCCGCCTATCTGTGCAGCTCGGGGGGAAGGGGGGGGGTCCACTGAATTG
TTGTGTATGTTTGCTGTGGATATGGCCCTTTTCAGTCAGGCGCAGCCAGC
ACCGTTTCTTGTGTGTAGAGGCTACAATGCTCCAACAATTTTTGTCCAAT
CCGTCCGGCGGAGTAGACATTAAGTGTACTGTAACCACTCGTTCTCTTGT
GCTATCGCCATTTTTCGCCATTTTTCGAACTACTGCGTGCTGTACCCCAA
CAATCCTATCCTGAGTTTCTGTTGAATACGAGAATCTTTTTGCTGGAACA
ATGGGTAGACCAGCAAAAACATCCTGGTAGGTGGCACTTACAATACACTT
ACGAGAAGCTCTCGGCTATCATTGCTCCAACCGAGCCTCCATTCATTGTT
CGTATGCTAGTCTCGAAGATACATACAGCAGCTGTAGTAGATAGTAGTAG
ATGGGTGCCAC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10483:188..4848-

>mRNA_E-fasciculatus_F_contig10483.385.1 ID=mRNA_E-fasciculatus_F_contig10483.385.1|Name=mRNA_E-fasciculatus_F_contig10483.385.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1074bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10483:188..4848- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGTCGGCCGCGATGGGAGTGATTCCGTTCAAGGTCAACGACGACCT
CAGGGCACAGCTCCAAACGTTCGGCGCTGGCGGGGGTGACGTGGATTGGA
TTGAGATGATGAAGTCGGCCGCGATGGGAGTGATTCCGTTCAAGGTCAAC
GACGACCTCAGGGCACAGCTCCAAACGTTCGGCGCTGGCGGGGGTGACGT
GGATTGGATTGAGATGCGCATGGATGGCGAGGAGATTACTCTCGTGGGTG
CCAAGACCATCGCCGAGCTCGCCGATCTGCAAGAGCTGATTAACGAGCGC
ATGGATGGCGAGGAGATTACTCTCGTGGGTGCCAAGACCATCGCCGAGCT
CGCCGATCTGCAAGAGCTGATTAACGAGGAGGAGCCACGATTTATTCTCC
TGCGTCGGGATGACTCGAAATGAGGAGCCACGATTTATTCTCCTGCGTCG
GGATGACTCGAAATTCCTGGTGTATAGCTGCCCGGAAGAGTCGGCGGTGA
GGTTGAAGATGACGTATTCTTCCAGCAAGGCCAGCGTCGTTGCCGCGGCC
GCAGAAGCGGGGGTCACTGTCGACCACATGTCCTGGTGTATAGCTGCCCG
GAAGAGTCGGCGGTGAGGTTGAAGATGACGTATTCTTCCAGCAAGGCCAG
CGTCGTTGCCGCGGCCGCAGAAGCGGGGGTCACTGTCGACCACATGGTGG
AGATTCGCGCTGCCAACGAAATAGACGAGGCAGTCGCGCATGCTGTTCGT
GGAAGCAAGGAGCACGCTGCGGGGGGGGGCGGGGGGGCGGGGGGGGAGGC
CACCACGATAAGCCCCCCCGTGCCCTCGGTAGCTCGACCTAGCAGACCTG
GACGGGGAAGGGCGAGGCTCACGAAGCGATCGTAGGTGGAGATTCGCGCT
GCCAACGAAATAGACGAGGCAGTCGCGCATGCTGTTCGTGGAAGCAAGGA
GCACGCTGCGGGGGGGGGCGGGGGGGCGGGGGGGGAGGCCACCACGATAA
GCCCCCCCGTGCCCTCGGTAGCTCGACCTAGCAGACCTGGACGGGGAAGG
GCGAGGCTCACGAAGCGATCGTAG
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