mRNA_E-fasciculatus_F_contig1047.373.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1047.373.1
Unique NamemRNA_E-fasciculatus_F_contig1047.373.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1047.373.1 vs. uniprot
Match: D7FJ08_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ08_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 6.210e-92
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 3 
Query:  831 MVLRWHHARKEYVFEWRDWSLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFLG 1253
            MVLRWHHARKEY+FEWRDW LWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFLG
Sbjct:    1 MVLRWHHARKEYMFEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFLG 141
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1047.373.1 vs. uniprot
Match: A0A835YLA2_9STRA (ESCRT-II complex subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA2_9STRA)

HSP 1 Score: 237 bits (604), Expect = 5.380e-72
Identity = 109/176 (61.93%), Postives = 136/176 (77.27%), Query Frame = 3 
Query:  723 MTDSCFEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWSLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 1250
            M ++ F+ PEFY+FPPFFTLQPVLATREKQL+LWCDMVL +H ARK Y F WRDW LWEN AI R+L   GA AVV ELVRTGHAEW D+GK+ ++L W +  + AA+L+++ R   +VGSV TVYELHQG++   T F GM+EG+ RKA++VLE+  R V+F+GATS EDG KF 
Sbjct:    1 MGEADFQVPEFYSFPPFFTLQPVLATREKQLKLWCDMVLAYHKARKAYAFAWRDWPLWENRAINRRLDEAGAQAVVAELVRTGHAEWQDSGKTSLSLFWDTPADTAARLYEWARSTGLVGSVVTVYELHQGEDTRETQFHGMEEGVLRKAIAVLEADGRAVLFQGATSTEDGFKFF 176
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BLAST of mRNA_E-fasciculatus_F_contig1047.373.1 vs. uniprot
Match: W7U3C0_9STRA (Vacuolar protein sorting-associated protein 25 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3C0_9STRA)

HSP 1 Score: 180 bits (457), Expect = 3.170e-50
Identity = 80/169 (47.34%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:  747 PEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWSLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEV-LGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 1250
            PE++ FPPFFTLQPVL TR+ QL+LW ++VL+WH A+   + +  +W L+ N AI R L  +G   VV+ LV +GHAEW D  ++   ++W SA+E+AA +  F+R + M G+V+TVYEL  GDE+ +G DF G +  +FR+AL +LE Q +  +FKG++ E DG+KF+
Sbjct:   13 PEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFV 181
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BLAST of mRNA_E-fasciculatus_F_contig1047.373.1 vs. uniprot
Match: A0A7S2EJ37_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJ37_TRICV)

HSP 1 Score: 179 bits (454), Expect = 6.960e-50
Identity = 85/177 (48.02%), Postives = 118/177 (66.67%), Query Frame = 3 
Query:  723 MTDSCFEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWSLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAG-KSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 1250
            M+ S FE PEF++FPPFFT+QPVL TREKQ+ LW +++LR+H  RK       D  LW N  IGRKL  EG  AV+++ V++GH EW D   K+   ++W   E++A+ ++D+   +  + SV TVYELH G++V G  F G DE L R+AL++LE Q +  +FKG TS EDG+KF 
Sbjct:    1 MSLSGFELPEFFSFPPFFTIQPVLVTREKQMGLWRELILRYHTDRKIKTLVVHDCPLWSNPEIGRKLGQEGVKAVMDDFVKSGHGEWEDPDVKTRCRILWRKPEQLASDIYDWADANGYINSVCTVYELHSGEDVNGMSFQGADEELLRRALTILEDQGKCTVFKGETSSEDGIKFF 177
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1047.373.1 vs. uniprot
Match: W2JSH0_PHYPR (Uncharacterized protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=W2JSH0_PHYPR)

HSP 1 Score: 176 bits (446), Expect = 1.020e-48
Identity = 85/171 (49.71%), Postives = 115/171 (67.25%), Query Frame = 3 
Query:  738 FEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWSLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 1250
            F  PE+Y+FPPFFTLQPV ATREKQL LW  ++L +H A    +F+    +L+EN  I R ++ +G  AVVE L+R GH  W D  K+   +MW    E AA+++DF ++H M+G+VFTVYEL+ G+E LGT+  GM+  L R+AL VLE + +  +  G T EEDGVKFL
Sbjct:    4 FSYPEYYDFPPFFTLQPVRATREKQLVLWQQLILEYHRAHDLPLFQPLASTLFENVKISRNMAQDGRMAVVEHLIRCGHGRWEDDTKTRCRIMWKKPAEWAAEIYDFAKEHGMLGNVFTVYELYAGEETLGTNIHGMEPWLLREALRVLEGEGKAAVIAGETCEEDGVKFL 174
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1047.373.1 vs. uniprot
Match: A0A7S2XTF5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTF5_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.020e-48
Identity = 83/172 (48.26%), Postives = 115/172 (66.86%), Query Frame = 3 
Query:  738 FEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWSLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAG-KSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 1250
            FE PEFY+FPPFFT+QPVLATREKQ+ LW +++L++H  RK       D  LW N  IGR+L+ E   AV+ + V++GH EW DA  ++   ++W   E++A+ ++D+   +  + SV TVYELH G++V G  F G DE L R+AL +LE Q +  MFKG TS EDG+KF 
Sbjct:    6 FEYPEFYSFPPFFTIQPVLATREKQMGLWRELILKYHTDRKIKTLVLHDCPLWMNPDIGRELNQEAIQAVMNDFVKSGHGEWEDADVQTRCRILWRKPEQLASDIYDWAMANGYINSVCTVYELHSGEDVNGMSFEGADEELLRRALGILEDQGKCTMFKGDTSSEDGIKFF 177
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1047.373.1 vs. uniprot
Match: B7G749_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G749_PHATC)

HSP 1 Score: 175 bits (443), Expect = 2.520e-48
Identity = 81/170 (47.65%), Postives = 114/170 (67.06%), Query Frame = 3 
Query:  738 FEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWSLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKF 1247
            F+ PEFY+FPPFFT+QPVLATREKQ+ LW +++LR+H  +K       D  LW+N+ I R+L       V+++  R GH EW DA K+   ++W + E++A  +  +  K+  VGSV TVYELH G++V G  F G DE L R+ALS+LE + +  +F+G TSEEDG+KF
Sbjct:    4 FQYPEFYSFPPFFTIQPVLATREKQMALWRELILRYHTEKKIKTLVVHDCPLWKNDNIKRRLQPGEIQEVLDDFCRHGHGEWQDANKTTCRILWRTPEQLATDIHQWAEKNGYVGSVCTVYELHSGEDVNGMSFQGADEELLRRALSILEDRGKCTIFRGETSEEDGIKF 173
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1047.373.1 vs. uniprot
Match: A0A6U3ZAU0_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZAU0_9STRA)

HSP 1 Score: 172 bits (435), Expect = 4.020e-47
Identity = 80/177 (45.20%), Postives = 116/177 (65.54%), Query Frame = 3 
Query:  723 MTDSCFEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWSLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAG-KSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 1250
            M  + FE PEFY+F PFFT+QPVLATREKQ+ LW D++L++H   +       D  LW+N  IGR+L +E   AV+E+ ++ GH EW D   ++   ++W   E++A+ ++D+   +  + SV TVYELH G+++ G  F G DE L R+ALS+LE Q +  +FKG TS EDG+KF 
Sbjct:    1 MASANFEYPEFYSFKPFFTIQPVLATREKQMGLWRDLILKYHTELRIKTLVVHDCPLWKNPGIGRELDNESIMAVMEDFIKGGHGEWEDPDVRTRCRILWRKPEQLASDIYDWAEANGYINSVCTVYELHSGEDINGMSFEGADEELLRRALSILEDQGKCTIFKGDTSSEDGIKFF 177
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1047.373.1 vs. uniprot
Match: A0A8K1C878_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C878_PYTOL)

HSP 1 Score: 171 bits (433), Expect = 7.830e-47
Identity = 84/171 (49.12%), Postives = 116/171 (67.84%), Query Frame = 3 
Query:  738 FEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWSLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 1250
            F  PE+Y+FPPFFTLQPV ATREKQL LW  ++L +H  + + +F+     L+EN  I RK++S+G  AVVE L+R G+  W D  K+   +MW    E AA+++DF  +  M+G+V+TVYEL+ G+E LGT   GM+  L R++L VLES+ +  +  GAT EEDGVKFL
Sbjct:    4 FSYPEYYDFPPFFTLQPVRATREKQLVLWKQLILEFHRTQGQPLFQPFTSPLFENAKISRKMASDGRLAVVEYLIRCGNVTWEDDTKTRCRIMWKKPAEWAAEIYDFATERAMIGNVYTVYELYAGEETLGTPVHGMEPWLLRESLKVLESEGKAAIIDGATLEEDGVKFL 174
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1047.373.1 vs. uniprot
Match: K3X569_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X569_GLOUD)

HSP 1 Score: 171 bits (432), Expect = 1.200e-46
Identity = 84/172 (48.84%), Postives = 115/172 (66.86%), Query Frame = 3 
Query:  738 FEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWSLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFLG 1253
            F  PE+Y+FPPFFTLQPV ATREKQL LW  ++L +H      +F+    +L+EN  I RK++ EG  AVVE L+R G+  W D  ++   +MW    E AA+++DF ++  MVG+VFTVYEL+ G+E LG+   GM+  L R+AL VLE++ +  +  G T EEDGVKFLG
Sbjct:    7 FAYPEYYDFPPFFTLQPVRATREKQLVLWKQLILEYHRTHGLPLFQPFSSALFENVKISRKMAQEGRLAVVEYLIRCGNGSWEDDTRTRCRIMWKKPVEWAAEIYDFAKQRAMVGNVFTVYELYAGEETLGSSLHGMEPWLLREALKVLEAEGKAAIIAGETCEEDGVKFLG 178
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1047.373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ08_ECTSI6.210e-9298.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLA2_9STRA5.380e-7261.93ESCRT-II complex subunit-domain-containing protein... [more]
W7U3C0_9STRA3.170e-5047.34Vacuolar protein sorting-associated protein 25 n=2... [more]
A0A7S2EJ37_TRICV6.960e-5048.02Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
W2JSH0_PHYPR1.020e-4849.71Uncharacterized protein n=17 Tax=Peronosporaceae T... [more]
A0A7S2XTF5_9STRA1.020e-4848.26Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B7G749_PHATC2.520e-4847.65Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A6U3ZAU0_9STRA4.020e-4745.20Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A8K1C878_PYTOL7.830e-4749.12Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X569_GLOUD1.200e-4648.84Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1047contigE-fasciculatus_F_contig1047:1003..4741 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score288.1
Seed ortholog evalue2.8e-75
Seed eggNOG ortholog2880.D7FJ08
Preferred nameVPS25
KEGG rclassRC00004,RC00010,RC00131,RC01160
KEGG koko:K01904,ko:K01952,ko:K07442,ko:K08867,ko:K12189
KEGG ReactionR01616,R01943,R02194,R02221,R02255,R04463,R06583
KEGG Pathwayko00130,ko00230,ko00360,ko00940,ko01100,ko01110,ko01130,ko04144,map00130,map00230,map00360,map00940,map01100,map01110,map01130,map04144
KEGG ModuleM00039,M00048,M00137,M00350,M00410
GOsGO:0000003,GO:0000429,GO:0000430,GO:0000433,GO:0000578,GO:0000814,GO:0001894,GO:0001932,GO:0001933,GO:0002009,GO:0002165,GO:0003002,GO:0003006,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005829,GO:0006355,GO:0006357,GO:0006403,GO:0006469,GO:0006508,GO:0006511,GO:0006605,GO:0006623,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006897,GO:0006914,GO:0006996,GO:0007032,GO:0007034,GO:0007154,GO:0007163,GO:0007175,GO:0007176,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007350,GO:0007351,GO:0007389,GO:0007444,GO:0007483,GO:0007484,GO:0007485,GO:0007548,GO:0007552,GO:0007560,GO:0007584,GO:0008104,GO:0008150,GO:0008152,GO:0008283,GO:0008285,GO:0008298,GO:0008358,GO:0008593,GO:0008595,GO:0009056,GO:0009057,GO:0009605,GO:0009653,GO:0009790,GO:0009791,GO:0009798,GO:0009880,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009948,GO:0009952,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0009994,GO:0010008,GO:0010256,GO:0010468,GO:0010469,GO:0010556,GO:0010558,GO:0010563,GO:0010605,GO:0010629,GO:0010646,GO:0010648,GO:0010669,GO:0010941,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019941,GO:0019953,GO:0021700,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023057,GO:0030011,GO:0030154,GO:0030163,GO:0030539,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031400,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031974,GO:0031981,GO:0031982,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032511,GO:0032984,GO:0032991,GO:0033036,GO:0033365,GO:0033673,GO:0034613,GO:0035088,GO:0035090,GO:0035112,GO:0035126,GO:0035215,GO:0035239,GO:0035282,GO:0035295,GO:0036257,GO:0036258,GO:0036452,GO:0042058,GO:0042059,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042493,GO:0042592,GO:0042802,GO:0042803,GO:0042886,GO:0042981,GO:0043067,GO:0043086,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043328,GO:0043549,GO:0043632,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045013,GO:0045014,GO:0045184,GO:0045197,GO:0045199,GO:0045324,GO:0045450,GO:0045859,GO:0045892,GO:0045934,GO:0045936,GO:0045990,GO:0046015,GO:0046618,GO:0046661,GO:0046907,GO:0046983,GO:0047485,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048585,GO:0048599,GO:0048608,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048803,GO:0048805,GO:0048806,GO:0048808,GO:0048856,GO:0048869,GO:0048871,GO:0050678,GO:0050680,GO:0050730,GO:0050732,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051338,GO:0051348,GO:0051503,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0060249,GO:0060255,GO:0060429,GO:0060562,GO:0060810,GO:0060811,GO:0061097,GO:0061099,GO:0061245,GO:0061458,GO:0061919,GO:0061984,GO:0061985,GO:0061986,GO:0061987,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070086,GO:0070727,GO:0070887,GO:0070925,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080090,GO:0090598,GO:0097352,GO:0097708,GO:0098588,GO:0098657,GO:0098796,GO:0098805,GO:1901184,GO:1901185,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:1904669,GO:2000112,GO:2000113,GO:2000272,GO:2001141
EggNOG free text desc.protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
EggNOG OGsKOG4068@1,KOG4068@2759
EC2.1.1.219,2.1.1.220,2.7.11.1,6.2.1.12,6.3.5.3
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko01009,ko03016,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionESCRT-II complex, Vps25 subunit, N-terminal winged helix
Ec32 orthologEc-07_004870.1
Exons3
Model size1684
Cds size534
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1047.373.1prot_E-fasciculatus_F_contig1047.373.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1047 1725..4313 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927544.403577-UTR-E-fasciculatus_F_contig1047:1002..17241622927544.403577-UTR-E-fasciculatus_F_contig1047:1002..1724Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1047 1003..1724 +
1695995587.829818-UTR-E-fasciculatus_F_contig1047:1002..17241695995587.829818-UTR-E-fasciculatus_F_contig1047:1002..1724Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1047 1003..1724 +
1622927544.4481063-UTR-E-fasciculatus_F_contig1047:4313..47411622927544.4481063-UTR-E-fasciculatus_F_contig1047:4313..4741Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1047 4314..4741 +
1695995587.8726935-UTR-E-fasciculatus_F_contig1047:4313..47411695995587.8726935-UTR-E-fasciculatus_F_contig1047:4313..4741Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1047 4314..4741 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927544.4143014-CDS-E-fasciculatus_F_contig1047:1724..18041622927544.4143014-CDS-E-fasciculatus_F_contig1047:1724..1804Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1047 1725..1804 +
1695995587.8433266-CDS-E-fasciculatus_F_contig1047:1724..18041695995587.8433266-CDS-E-fasciculatus_F_contig1047:1724..1804Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1047 1725..1804 +
1622927544.4241679-CDS-E-fasciculatus_F_contig1047:3473..38041622927544.4241679-CDS-E-fasciculatus_F_contig1047:3473..3804Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1047 3474..3804 +
1695995587.8533306-CDS-E-fasciculatus_F_contig1047:3473..38041695995587.8533306-CDS-E-fasciculatus_F_contig1047:3473..3804Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1047 3474..3804 +
1622927544.4336271-CDS-E-fasciculatus_F_contig1047:4190..43131622927544.4336271-CDS-E-fasciculatus_F_contig1047:4190..4313Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1047 4191..4313 +
1695995587.8632576-CDS-E-fasciculatus_F_contig1047:4190..43131695995587.8632576-CDS-E-fasciculatus_F_contig1047:4190..4313Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1047 4191..4313 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1047.373.1

>prot_E-fasciculatus_F_contig1047.373.1 ID=prot_E-fasciculatus_F_contig1047.373.1|Name=mRNA_E-fasciculatus_F_contig1047.373.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=178bp
MTDSCFEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVF
EWRDWSLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWH
SAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKA
LSVLESQERVVMFKGATSEEDGVKFLG*
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mRNA from alignment at E-fasciculatus_F_contig1047:1003..4741+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1047.373.1 ID=mRNA_E-fasciculatus_F_contig1047.373.1|Name=mRNA_E-fasciculatus_F_contig1047.373.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3739bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1047:1003..4741+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCCTGCATCGATTTTTCAAAGCTCGATTACTATTACTCCATGACCAAGA
GGATGCCGGAAGCAAAAGATACAACGATAGGTTTTCGGAAAGTTCTCAAC
GGGAGGATTCCGACGCCGCCATTTTCGGTACCGTGACTGCTTCTCCTGCC
GAGTAATCAAGATTTGGCAATCGGTTGCGTGTGATGTCGGTGCAACCTGA
GGTGGCCGCGCTATCCTCAATTAGCTGACAGTCCCGCCACGACGAGCGTA
CATAGTACAAGTCAGCTGGCGGGTGATCTGGTGAAGCTGCTGCTGTCGCT
GTAGCTCGTGGTACGGATATGCGGGTCTGCTTGTTTGGAGACATTTGTCG
AGAGAGAAAGGCACGACTCTTGTTGACTACAATGCCAATGATATGGATAG
CATGCATATTCGGACCAACCTGGTGAGGCATATCGCCACGTAGATATGGA
GCGGATCCAGGCGTACAGAAGAGCGCCAAACTTCAGCAGCCACAGCACTG
ATGCGCTTGATTATTCTCCCTGGTGAGCTGGCTCTAGATTCTCCCAGGAT
ACAAGGACTTCGCTACGAGAAGGCACGGCAGCAACTGAGGAGAAGGACTA
TGTAGATAGCAGATGGACTGATGGATGATCGAAGGGGGAGCTAGCACGCA
ACATACGGCGGCGCCCCATCCTTTCACATCATTGTGTCATTACAAGACAC
TCTCTCCGTCCCACGCACAGGTATGACTGATTCATGTTTCGAGAAACCCG
AGTTCTACAACTTCCCCCCCTTCTTCACTCTACAGCCGGTGCTGGCAACC
CGGTGAGTTTTACATTCCACTGAGGGAAGTAAAGAAAAATGGACCTACAT
TTATGCTCACATGGCGCGCGTTCTCTGTCGATGCATGGCATACAGAGGGC
GCCAGTTTTGTGACCCGAGGCTCGTTGTGTTGACATTAAAAACCGTTCCG
GCGTTCGGGTCTGCTCAAGTACCTTCTTAACATCGGTACCTGTCAAACTA
ATATGTTCATACGTTCATACAGCCGTGTGCAGCAATTTGTTGTTGCATAG
TCTATAAAATTACCCTCTACTGCTTGTAGTGGCCTCTACCCCCTTCTTTT
CGATGGGCTGGCTTTTTAAATATGCGTGTTTGCTCCGTCACATGTGTGTA
TGACAATTGAGGTTCAACAGGGTAGTTTGCAACAGCTCTTGCTTGTGGTG
ATCCAAAATTCTAGCGAATGGGATAATACATCACTGATGTATGATATGAC
ACATACTCCCTTACACTGCTGTCTCTGAACCTGGTGTTCATTGTGATCAT
CGTTTTGATGTATGCTTACGATGACGTCGATTATTAAAAGTTTGAAGTAA
GGCTCACCAAGGTGAGATATCGTGGAGGTTGTAGCCAAGGGAGGGTATTC
CGCGAGCTAATTGCTCTGCGCCGCTGCTGGCTGCTGGCATTTAGAGTTGA
CCTCATTCGAATATTAGGTGACCTCTGCAGACCCACGACGGGCGATGTGA
TGGCGATCCAATACTCTAGCGTGCGATATGGAGCTCTATATATGGTGTTG
TTGTTCTGATGTGTGGCGAAGTTTCGGATGGCGTGTGTACTTTATTATTT
ATTCTGTGTATATGTTCGCCGACAACTCGCGTGAAGTGGCCTCCGAGATA
CCTGAAAAAGGCGAACTCCTGAAACAGCAAGCGATTGCGGTGGCGCAGAA
AACTGATACCATCGATCTGCCACACAGCGTAAAACCATATAGCGTGCGGG
CGTAGATTATCGCCATCGGCGCTGAATCCTCAGCGGCAAGCAATGATCTA
TACGTAGCAGAGGTACCAACGGTGCCAACAACGTATTTGGAATGGCTCAG
CGGCAAAAATTCAGAGGGGATCAATTGGATAGGCTGCCTTTCGTATAGGC
AGAAACTCCGGTGATGTACCGAAGGTGTACACTGGCGCACCGAAAAGATG
GTACGAAGCACGCAACACAACTGCTTGACTCCCCACCAGCAAGGCAGCTT
TAACTCTGTGCTGTAAGCTGGGTGCTGTGCGCTTCGAAACCGTTTCCTTT
GGCGATGAGTCTGTGCAGGTCGTGTCATGAGAAACATTTCTTTCAAATGA
GCATTATTCGAAGACATCCTCTGGCTACAGAACAAGCCCCGGGGCTTTGA
GGAATCCCTCTGAAATTTGTTTCCACATACGTTACTTCAACATTATATCG
CACGGAGGCGTTCTTCGCGGCGCCTTAACTACGACCTTCTGCTTCTGCCT
GTCACTACGAGCGCTATGTTTCCTCTGTCACTATGTTTCTTTGCTCTCTT
CAAAGAGCAGGGCCTCGATTTTTTTACGAAGATATTGCCTCGGCCCCCAA
CTACTGTGCCTATTCCCCGTTTTCTCTTCCGTTGTTGTCGCGGCTCGAAG
AGATTCGTGAGTTCGCGCGGGTACCCGTAATCACTAACGTGTCACCTTTC
GATGTGGCCCACCTCGCACAGAGAAAAACAACTGAGGTTATGGTGCGACA
TGGTACTGAGATGGCACCACGCCAGAAAGGAGTACGTGTTCGAGTGGAGA
GACTGGTCGCTGTGGGAAAATGAAGCAATCGGACGAAAGCTAAGCAGTGA
GGGGGCGAACGCAGTCGTCGAAGAATTGGTTCGCACAGGCCATGCAGAGT
GGAACGATGCTGGAAAGTCCATGGTGACTTTAATGTGGCACAGTGCGGAA
GAGATTGCAGCCAAGCTATTCGACTTCGTGAGGAAGCACGACATGGTCGG
CAGTGTTTTCACCGTGTACGAATTGCACCAAGGCGATGAAGTCTTGGGGA
CGGTAAGAGCTAATGCGTGTGTGGCTTGGGCCCATGAATCTGAGAGCTGA
CTTCCAAGTCTAGTATGGTCAAATCCATGAGCCATGAATGGATGTCTCGT
TGAGCAACGTTGCCATGGTCCTTGCCCTCTCGATGGTGTGTTGGCAAACC
AACTTTTACAGCCGTGCAATGCGCCCCAAGAAAAACCCAGGCTTTGACGA
GAGCTCTCGACCCTTCTACCGAGGAGAGCGATTGGCTTTGATCGATTACG
TTGTAGGTGGTGCTGTAGTTCAGCCTACCTTAGCAAATCACGCTCTACTT
AGGTTCGGGGTCCGCGTGCAATGGCTGCATTCTCGTGCCAAATCAACTGA
AATGGGAACACACTTTTCGCAACTTTTGATGTGCACAGGATTTTTTCGGG
ATGGATGAAGGGCTTTTCAGGAAAGCGCTATCTGTCTTGGAGAGCCAAGA
GCGAGTGGTAATGTTCAAGGGAGCGACTTCGGAAGAGGATGGAGTAAAGT
TCTTAGGATAAGTTTGTGCTTGAAAAGGTTTCTTCGAAGCACGGCTTGGC
ACGGGATCAAACCGTCTGTAGGCGCAGGAAACACGCTTTGAGGATAGGAT
TGATACTAGATCGTGTTGAACTTGTTCTTAGCGTTTACGTTCTGGAAATG
CGAGGTCAAAGTATGAACAAAATTCCCAGAGGCACGACGTGGATGCCCCC
ATCGCCTTTTTAGTTAGCACCCTAAGCCACCATTGTCTTGTAAGTTAGCA
TGCTAAGTATTGTACACTGAAGATCGAGTATACCGACCCCGTGCGAGCTT
GATGATGATGTGCGGATATCGGAAGAAAGTCGTTCTAGATTTGGAGTTTG
ACGCAATCCGCATGCGAAACCAAGGCATTTGAGATGCTTGGTGCAGGTCG
GCCTGGAATCTCCCCACGAATTTCACTTGTGAAGCCGAT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1047:1003..4741+

>mRNA_E-fasciculatus_F_contig1047.373.1 ID=mRNA_E-fasciculatus_F_contig1047.373.1|Name=mRNA_E-fasciculatus_F_contig1047.373.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1068bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1047:1003..4741+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACTGATTCATGTTTCGAGAAACCCGAGTTCTACAACTTCCCCCCCTT
CTTCACTCTACAGCCGGTGCTGGCAACCCGATGACTGATTCATGTTTCGA
GAAACCCGAGTTCTACAACTTCCCCCCCTTCTTCACTCTACAGCCGGTGC
TGGCAACCCGAGAAAAACAACTGAGGTTATGGTGCGACATGGTACTGAGA
TGGCACCACGCCAGAAAGGAGTACGTGTTCGAGTGGAGAGACTGGTCGCT
GTGGGAAAATGAAGCAATCGGACGAAAGCTAAGCAGTGAGGGGGCGAACG
CAGTCGTCGAAGAATTGGTTCGCACAGGCCATGCAGAGTGGAACGATGCT
GGAAAGTCCATGGTGACTTTAATGTGGCACAGTGCGGAAGAGATTGCAGC
CAAGCTATTCGACTTCGTGAGGAAGCACGACATGGTCGGCAGTGTTTTCA
CCGTGTACGAATTGCACCAAGGCGATGAAGTCTTGGGGACGAGAAAAACA
ACTGAGGTTATGGTGCGACATGGTACTGAGATGGCACCACGCCAGAAAGG
AGTACGTGTTCGAGTGGAGAGACTGGTCGCTGTGGGAAAATGAAGCAATC
GGACGAAAGCTAAGCAGTGAGGGGGCGAACGCAGTCGTCGAAGAATTGGT
TCGCACAGGCCATGCAGAGTGGAACGATGCTGGAAAGTCCATGGTGACTT
TAATGTGGCACAGTGCGGAAGAGATTGCAGCCAAGCTATTCGACTTCGTG
AGGAAGCACGACATGGTCGGCAGTGTTTTCACCGTGTACGAATTGCACCA
AGGCGATGAAGTCTTGGGGACGGATTTTTTCGGGATGGATGAAGGGCTTT
TCAGGAAAGCGCTATCTGTCTTGGAGAGCCAAGAGCGAGTGGTAATGTTC
AAGGGAGCGACTTCGGAAGAGGATGGAGTAAAGTTCTTAGGATAAGATTT
TTTCGGGATGGATGAAGGGCTTTTCAGGAAAGCGCTATCTGTCTTGGAGA
GCCAAGAGCGAGTGGTAATGTTCAAGGGAGCGACTTCGGAAGAGGATGGA
GTAAAGTTCTTAGGATAA
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