mRNA_E-fasciculatus_F_contig10467.372.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10467.372.1 vs. uniprot
Match: D7G1E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI) HSP 1 Score: 196 bits (498), Expect = 5.500e-58 Identity = 104/137 (75.91%), Postives = 116/137 (84.67%), Query Frame = 3
Query: 333 MFTAHPDLAQLDN-LPNFGKFFIPSTMKRSSSKFAAISQQGRDQMRYLAQRAQTLPAPGTVQLVAGGISYPSGHGPEKVKQYVDLRLLAEAAEAEDVDLRVLYMKRSAKELLLANTVHRRFQDTLGDTNLSAEERFM 740
MF AHPDL + D LPNF KFFI +TM+ SS+ F A QQGRDQMR LAQRAQTLP PGTVQL+ GGISYP G+GP+KV+QYVDLRLLAEAAEAE VDLRVLYMKRSAKELLLA+TVHR FQ+ LGD + SAE+RFM
Sbjct: 1 MFKAHPDLVRFDEKLPNFWKFFISTTMRTSSTAFTASWQQGRDQMRDLAQRAQTLPTPGTVQLITGGISYPCGNGPQKVQQYVDLRLLAEAAEAEGVDLRVLYMKRSAKELLLADTVHRGFQNFLGDIDSSAEKRFM 137
BLAST of mRNA_E-fasciculatus_F_contig10467.372.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE) HSP 1 Score: 116 bits (290), Expect = 5.820e-25 Identity = 65/161 (40.37%), Postives = 98/161 (60.87%), Query Frame = 3
Query: 231 AVVNKTIVSNNMRLVFPLGLEGSGHHYFAGTFRAMFTAHPDLAQ-LDNLPNFGKFFIPSTMKRSSSKFAAISQQGRDQMRYLAQRAQTLPAPGTVQLVAGGISYPSGHGPEKVKQYVDLRLLAEAAEAEDVDLRVLYMKRSAKELLLANTVHRRFQDTLGD 710
A++ KT VS+ RLVF GLEG+GHHY ++F + +L + + +++ P M ++ +F S + MR LA+ A L +PG ++ + SYP GP KV QY+DL ++AE AE +D RVLY++RSAKE+++ANTVHR+F +GD
Sbjct: 137 AILPKTHVSDVFRLVFVAGLEGTGHHYVMWANASLFGDNMNLPRRYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVENMRRLAEWAANLSSPGALEFFSIPCSYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKFHLLMGD 297
BLAST of mRNA_E-fasciculatus_F_contig10467.372.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 6.940e-14 Identity = 56/163 (34.36%), Postives = 87/163 (53.37%), Query Frame = 3
Query: 234 VVNKTIVSNNMRLVFPLGLEGSGHHYFAGTFRAMFTAHPDLAQLDNLPNFGKFFIPS-TMKRSSSKFAAISQQGRDQMRYLAQRAQTLPAPGTVQLVAGG---------ISYPSGHGPEKVKQYVDLRLLAEAAEAEDVDLRVLYMKRSAKELLLANTVHRRF 692
VV K VS+ MR+VF +GLEG+GHHY A + D + L K P ++ +S + + ++ R++M LA + A G +V+ G +SYP+ +G EK QYVD RL+AE AE VD+R +Y+ RSA ++L +++ H +
Sbjct: 98 VVEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDV--CKKDKVRCPKLCVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNY 258
BLAST of mRNA_E-fasciculatus_F_contig10467.372.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 2.990e-13 Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = 3
Query: 231 AVVNKTIVSNNMRLVFPLGLEGSGHHYFAGTFR-AMFTAHPDLAQLDNLPNFGKFFIPSTMKRSSSK-FAAISQQGRDQMRYLAQRAQTLPAPG--------TVQLVAGGISYPSGHGPEKVKQYVDLRLLAEAAEAEDVDLRVLYMKRSAKELLLANTVHRRFQDT 701
AVV K VS+ +R++F +GLEG+GHHYF F A TA A N K PS S+ + + ++ R ++ LA G T + +G +S+P+ +G +K QYVD RLLAE AE VD+R +Y+ RSA+ +L+++T H + T
Sbjct: 56 AVVEKKTVSSQLRVMFLVGLEGTGHHYFLNVFDDACTTAAVPCA---NACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQAAIAQFVTCRSKSGMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHYGGT 219
BLAST of mRNA_E-fasciculatus_F_contig10467.372.1 vs. uniprot
Match: A0A7S0A0K6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0K6_9DINO) HSP 1 Score: 61.2 bits (147), Expect = 1.470e-6 Identity = 54/172 (31.40%), Postives = 78/172 (45.35%), Query Frame = 3
Query: 243 KTIVSNNMRLVFPLGLEGSGHHYFAGTFRAMFTAHPDLAQLD------------NLPNFG-KFFIPSTMKRSS---------SKFAAISQQGRDQMRYLAQRAQTLPAPGTVQLVAGGISYPSGHGPEKVKQYVDLRLLAEAAEAEDVDLRVLYMKRSAKELLLANTVHRRF 692
K + RL+F GLEGSGHH + + A A ++ L +F K + P K+ S F + R +R L++R T P ++ G +SYP+ G K+ Q D+RLLAE AE E VD R+L + R A +L + T+HR F
Sbjct: 101 KRVHGARWRLLFVAGLEGSGHHLWIPLLKRCVKARRCAADVELGRRLWTDRTRKGLWSFETKLYAPRAAKKWEYAPPGAKWLSGFRRAEGEVRTALRRLSRRNATSPLLASLG-GCGMMSYPNFPGKLKMFQTPDVRLLAELAEDEGVDFRILVLHRPAAAVLRSTTIHRHF 271
BLAST of mRNA_E-fasciculatus_F_contig10467.372.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 9.630e-6 Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 3
Query: 525 GGISYPSGHGPEKVKQYVDLRLLAEAAEAEDVDLRVLYMKRSAKELLLANTVHRRF 692
G +SYP+ +G EK QYVD RL+AE AE VD+R +Y+ RSA ++L +++VH +
Sbjct: 80 GMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNY 135
BLAST of mRNA_E-fasciculatus_F_contig10467.372.1 vs. uniprot
Match: A0A7S3PR25_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR25_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 3.040e-5 Identity = 55/171 (32.16%), Postives = 77/171 (45.03%), Query Frame = 3
Query: 243 KTIVSNNMRLVFPLGLEGSGHHYFAGTFRAMF-----TAHPDLAQLDNLP--------NFGKFFIPSTMKRSSSKFAAISQQGRDQMRYLAQRAQTLPAPGTVQLVAGG--------ISYPSGHGPEKVKQYVDLRLLAEAAEAEDVDLRVLYMKRSAKELLLANTVHRRF 692
K V + +RLVF +GLEG+GHH + G + A L L P N GK F S +S F + D M L +A + LV G SYP G EK Q+ D+ LAE AE+ +D RV+ ++R A+EL++++ HR F
Sbjct: 413 KKTVFSKLRLVFFVGLEGTGHHLWQGIVMKLLKNKQLNAECKLNDLIMHPAGGCWAPWNNGKGFFCSA---ASESFKTGYEMAADAMMKL--KASNATGTHMLNLVYRGWKGNCGSIASYPCFGGSEKNLQHPDVLKLAELAESIGIDFRVVLLQRKAEELVISDIWHRHF 578 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10467.372.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10467.372.1 >prot_E-fasciculatus_F_contig10467.372.1 ID=prot_E-fasciculatus_F_contig10467.372.1|Name=mRNA_E-fasciculatus_F_contig10467.372.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=225bp MCACNRNMRGAFGVTGSLRSVPLLLLLVVHPLGGAASAVRLQFGVTADGPback to top mRNA from alignment at E-fasciculatus_F_contig10467:1050..3835- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10467.372.1 ID=mRNA_E-fasciculatus_F_contig10467.372.1|Name=mRNA_E-fasciculatus_F_contig10467.372.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2786bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10467:1050..3835- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10467:1050..3835- >mRNA_E-fasciculatus_F_contig10467.372.1 ID=mRNA_E-fasciculatus_F_contig10467.372.1|Name=mRNA_E-fasciculatus_F_contig10467.372.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1350bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10467:1050..3835- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |