mRNA_E-fasciculatus_F_contig10393.318.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10393.318.1 vs. uniprot
Match: A0A6H5JUL1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUL1_9PHAE) HSP 1 Score: 820 bits (2118), Expect = 1.230e-291 Identity = 413/435 (94.94%), Postives = 425/435 (97.70%), Query Frame = 1
Query: 1 QTGVPNQCIYSPRLKSGRKKKVRIDGVLYEEGTYGGELALANPGGVRHNVDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPESRRQAKLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLKDRSEQDVSLDLVFQMYDQPDGAVSGFNRSAAVGDWRRNQHAANGSGSSSPEQEQSGGGADSGKPTSAVDQMIAQAVTPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTVLMRSWGQLEDKDIGLAQLEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKT 1305
+TGVPNQC+YSPRLKSGRKKK RIDGVLYEEGTYGGELA ANPGGVR NVDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPE+RRQA+LAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLL+DRSEQDVSLDLVFQMYDQPDGAVSGFNRS AVGDWRRNQ+A GS +SPEQ SGGG+DSGKPTSAVDQMIAQAV+PPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVT+LMRSWGQLED+DIGLAQ+EEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKT
Sbjct: 146 ETGVPNQCVYSPRLKSGRKKKFRIDGVLYEEGTYGGELARANPGGVRRNVDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPETRRQARLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLRDRSEQDVSLDLVFQMYDQPDGAVSGFNRSGAVGDWRRNQNATKGS-PTSPEQTHSGGGSDSGKPTSAVDQMIAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTMLMRSWGQLEDRDIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKT 579
BLAST of mRNA_E-fasciculatus_F_contig10393.318.1 vs. uniprot
Match: A0A836CBP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP3_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.380e-53 Identity = 133/406 (32.76%), Postives = 197/406 (48.52%), Query Frame = 1
Query: 148 VDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPESRRQAKLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLKDRSEQDVS-LDLVFQMY----------DQPDGAVSGFNRSAAVGDWRRNQHAANGSGSSSPEQEQSGGGADSGKPTSAVDQMIAQAVTPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLF-VATDLSECITGVVIVKIFGGVTVLMRSWGQLEDKDI----------GLAQLEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFN 1299
V P A F+AS A+GL GHVEN F+A Y+RD N +P+T+E +V GMLE + L AN RR AKLAVFWGVVA+GSRILGA RY + +ALR+CFD +D VVQAYLLL ++ETM GN +RY+ A T+H K ++++ + + L+ + Q++ D+ SG N + A +A +M+ + P+ AL+ + ++ +V DP + C V +L +++A G + ++ L++C+ V I+ G+T+ M Q GL ++ G+ A++RPGL TFP+WWH +HCAAI L H G Y R +A F+
Sbjct: 275 VHPLARPFTASPALGLVGHVENIFIAAYIRDLNNFIPMTSEGAVMSGMLET------GKSLVPANAAPAASKRRSAKLAVFWGVVALGSRILGAPRADVERYRAQVTAALRDCFDEDDPMVVQAYLLLGSLETMLGNCPKARRYMHFAKTVH----ASLRAKSVQEQHQAQLEGLETLLQVFGARMCECDAVDEGPCTASGANTAVAA---------------------------------AACSEMLQSIFMARTGQAVKPMDALRLTLGMPNITRKVLDPESPCPIVLAHLHHLENACDGVGVIINTSSVLTDCVAIVAPQMIWHGITLSMSGRIQXXXXXXXXXXXXXXXAGLKEVAAGMELAMSRPGLMTFPLWWHCMHCAAITLQHHGLRADYDRFKAVFD 637
BLAST of mRNA_E-fasciculatus_F_contig10393.318.1 vs. uniprot
Match: A0A835YR83_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR83_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.720e-31 Identity = 108/388 (27.84%), Postives = 165/388 (42.53%), Query Frame = 1
Query: 163 GRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPESRRQAKLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLKDRS---EQDVSLDLVFQMY-----DQPDGAVSGFNRSAAVGDWRRNQHAANGSGSSSPEQEQSGGGADSGKPTSAVDQMIAQAVTPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTVLMRSWGQLEDKDIGLAQLEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNK 1302
G F A A GL G +EN+FLA+YL+D + PL ES V GM++ AD + +AL CFD D +VV+AYLLL T+ +M GN + KRY + T+H G A G++ +D S + L + Q Y D PD + + V QM A SP+ AL+ + + G +S+ D + C V+ L ++ A G ++ + L +C+ ++ G+T++M+ G+L +G+ +E G+ A+TRPGL TF +WWH LHCAAI +AH R DTY+RL+ +++
Sbjct: 772 GSFRAGPATGLVGRLENYFLASYLKDLHGFTPLACESIVVRGMMQAF------------------------------------------ADRAA--------AALGACFDEPDVQVVRAYLLLGTLHSMLGNASKAKRYAHFSQTLHAGLA----GQMREDSSWLESECALLQTLIQAYGPRLLDSPDAMRKPPDNPEGID----------------------------------VPQMSLMAQR---GHVRSPINALRIMIGLQGFASKALDHRSTCAEVRHSLLLLEHAWDGVLAVITNSGLQDCVAVTAPQCLYHGITLVMQ--GRLA---MGVEHIERGINLAITRPGLVTFTIWWHCLHCAAITMAHLNRVDTYLRLKDVYDR 1063
BLAST of mRNA_E-fasciculatus_F_contig10393.318.1 vs. uniprot
Match: A0A835Z4T4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T4_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.120e-13 Identity = 91/360 (25.28%), Postives = 134/360 (37.22%), Query Frame = 1
Query: 373 AKLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKE---------------------------------------VVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNG-NAIGPEGKLLKDRSEQDVSLDLVFQMYDQPDGAVSGFNRSAAVGDWRRNQHAANGSGSSSPEQEQSGGGADSGKPTSAVDQMIAQAVTPPSECQSSPLKALKYLSTVCGLSSE-----------VFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTVLMRSWGQLEDKDIGLAQLEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFN 1299
A AVFW V +GS + GAA T RY ALR CFD D VV AYL L +E M G+ A +RY+ + T++ G A G G D +E + L+ + + + S V P+ +S +D + A+ S P AL+ + V +P + V+Q + + A A + T LS CI + G T+LM+ E + GLA +E+G+ A+ +P L F +WWHA+HC I LAH GR Y+R +A ++
Sbjct: 29 ASAAVFWSTVGLGSFLCGAARAVTERYAAFAARALRACFDEPDTXXXXXXXXXXXXXXXXXXXXXKLAGAXXXXXXXXXXXXXXVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQGQPGSAW-DSNEGGMLSSLIASFGPR----ILDTSESEQV----------------PPDNPES------------LD-VPGMALAAKRGKVSRPFDALRIMLGVXXXXXXXXXXXXXXXXXALEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQ-----ERVEEGLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYD 349
BLAST of mRNA_E-fasciculatus_F_contig10393.318.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 3.950e-9 Identity = 62/209 (29.67%), Postives = 95/209 (45.45%), Query Frame = 1
Query: 40 LKSGRKKKVRIDGVLYEEGTY--GGELALANPGG---VRHNVDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVL-----SPAVSSRGLATANPIKQPESR---------RQAKL------AVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHA 591
+ SG K + E +Y GG LA N VR + R S+S A GL G EN FL + F ++PLTTES+V M+EV+ A S G + + + E + R+ L + W +A+G+ + G + E + Y+ L +L ECFD E +AYL++S + + G+E +RY+ A
Sbjct: 119 ISSGDASKAKRLAEAQEGASYDTGGVLATVNTRSMPTVRGRMSLKRCRLSSSPATGLVGMPENGFLCDFFGCFG-ILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKDWHGGGALARRHTLPDHPAKCMMWCAIALGALMRGISVEHVMGYVQLAWKSLTECFDGRSVEHARAYLIMSFLHRVIGDEDKNERYMSFA 326 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10393.318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10393.318.1 >prot_E-fasciculatus_F_contig10393.318.1 ID=prot_E-fasciculatus_F_contig10393.318.1|Name=mRNA_E-fasciculatus_F_contig10393.318.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=436bp QTGVPNQCIYSPRLKSGRKKKVRIDGVLYEEGTYGGELALANPGGVRHNVback to top mRNA from alignment at E-fasciculatus_F_contig10393:369..3898- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10393.318.1 ID=mRNA_E-fasciculatus_F_contig10393.318.1|Name=mRNA_E-fasciculatus_F_contig10393.318.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3530bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10393:369..3898- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10393:369..3898- >mRNA_E-fasciculatus_F_contig10393.318.1 ID=mRNA_E-fasciculatus_F_contig10393.318.1|Name=mRNA_E-fasciculatus_F_contig10393.318.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2616bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10393:369..3898- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |