mRNA_E-fasciculatus_F_contig10373.308.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10373.308.1 vs. uniprot
Match: D8LIK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIK4_ECTSI) HSP 1 Score: 262 bits (670), Expect = 3.870e-83 Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 1
Query: 37 RGSSVAKDATVLAVYEDWAGGAGNALGTLYAYQKATALAESKGYDLAGKMKAGEISVGLYHTAGKGTRLAPMPGSENNNKPGVKLAVTADINGKPSPLTILESVVKQTGVYGKSRKGRLSVFWGDQVFIPSVGV 438
+GSSVAKDATVLAVYEDWAGGAGNALGTLYAYQKATALAESKGYDLAGKMKAGEISVGLYHTAGKGTRLAPMPGSENNNKPGVKLAVTADINGKPSPLTILESVVKQTGVYGKSRKGRLSVFWGDQVFIPSVGV
Sbjct: 47 KGSSVAKDATVLAVYEDWAGGAGNALGTLYAYQKATALAESKGYDLAGKMKAGEISVGLYHTAGKGTRLAPMPGSENNNKPGVKLAVTADINGKPSPLTILESVVKQTGVYGKSRKGRLSVFWGDQVFIPSVGV 180
BLAST of mRNA_E-fasciculatus_F_contig10373.308.1 vs. uniprot
Match: A0A2P4XQK3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQK3_9STRA) HSP 1 Score: 180 bits (457), Expect = 8.480e-55 Identity = 94/139 (67.63%), Postives = 105/139 (75.54%), Query Frame = 1
Query: 25 LLLRRGSSVAKDATVLAVYEDWAGGAGNALGTLYAYQKATALA-ESKGYDLAGKMKAGEISVGLYHTAGKGTRLAPMPGSENNNKPGVKLAVTADINGKPSPLTILESVVKQTGVYGKSRKGRLSVFWGDQVFIPSVGV 438
L+ RGS KDA V+AVYEDW GGAGN LGTLYAY KA A E G D+ + +G ISV LYHTAGKGTRLAP+PGSENNNK GVKL ++ K P+TILE+VVKQTGVY SR+GRLSVFWGDQVFIPS GV
Sbjct: 84 LMATRGSISPKDAKVIAVYEDWEGGAGNGLGTLYAYTKAVAAGKEIYGIDIPALLASGSISVALYHTAGKGTRLAPLPGSENNNKSGVKLPAMVEVKDKYVPMTILEAVVKQTGVYASSRRGRLSVFWGDQVFIPSAGV 222
BLAST of mRNA_E-fasciculatus_F_contig10373.308.1 vs. uniprot
Match: A0A7S3ZR67_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR67_9STRA) HSP 1 Score: 180 bits (456), Expect = 2.400e-51 Identity = 94/134 (70.15%), Postives = 105/134 (78.36%), Query Frame = 1
Query: 37 RGSSVAKDATVLAVYEDWAGGAGNALGTLYAYQKATALAESKG-YDLAGKMKAGEISVGLYHTAGKGTRLAPMPGSENNNKPGVKLAVTAD--INGKPSPLTILESVVKQTGVYGKSRKGRLSVFWGDQVFIPS 429
RG V KDATVL V+EDW GGAGN LGTLYA+ KA LAE KG LA K+ +G IS LYHTAGKGTRLAP+PG+ENNNKPGVKL TA ++G PLTILESVVK TG+Y SRKGRLSVFWGDQVF+P+
Sbjct: 54 RGVIVPKDATVLCVHEDWPGGAGNGLGTLYAWTKAAKLAEDKGDSQLASKLASGSISAALYHTAGKGTRLAPLPGAENNNKPGVKLPATAPLGVDGAVVPLTILESVVKSTGIYASSRKGRLSVFWGDQVFVPT 187
BLAST of mRNA_E-fasciculatus_F_contig10373.308.1 vs. uniprot
Match: A0A662WF60_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WF60_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.430e-51 Identity = 92/139 (66.19%), Postives = 102/139 (73.38%), Query Frame = 1
Query: 25 LLLRRGSSVAKDATVLAVYEDWAGGAGNALGTLYAYQKATALA-ESKGYDLAGKMKAGEISVGLYHTAGKGTRLAPMPGSENNNKPGVKLAVTADINGKPSPLTILESVVKQTGVYGKSRKGRLSVFWGDQVFIPSVGV 438
L+ RGS KD V+AV+EDW GGAGN LGTLYAY KA A E G D+ + G ISV LYHTAGKGTRLAP+PGSENNNK GVKL + K P+TILE+VVKQTGVY SR+GRLSVFWGDQVFIPSV V
Sbjct: 84 LMATRGSISPKDTKVIAVFEDWEGGAGNGLGTLYAYTKACAAGKELYGMDIPALLANGSISVALYHTAGKGTRLAPLPGSENNNKSGVKLPAMVQVKDKFVPMTILEAVVKQTGVYASSRRGRLSVFWGDQVFIPSVDV 222
BLAST of mRNA_E-fasciculatus_F_contig10373.308.1 vs. uniprot
Match: A0A6A4DFW8_9STRA (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DFW8_9STRA) HSP 1 Score: 180 bits (457), Expect = 3.180e-51 Identity = 94/139 (67.63%), Postives = 105/139 (75.54%), Query Frame = 1
Query: 25 LLLRRGSSVAKDATVLAVYEDWAGGAGNALGTLYAYQKATALA-ESKGYDLAGKMKAGEISVGLYHTAGKGTRLAPMPGSENNNKPGVKLAVTADINGKPSPLTILESVVKQTGVYGKSRKGRLSVFWGDQVFIPSVGV 438
L+ RGS KDA V+AV+EDW GGAGN LGTLYAY KA A E G D+ + G ISV LYHTAGKGTRLAP+PGSENNNK GVKL ++N K P+TILE+VVKQTGVY SR+GRLSVFWGDQVFIPS GV
Sbjct: 89 LMATRGSISPKDAKVIAVFEDWDGGAGNGLGTLYAYTKAVAAGKELYGIDIPALLATGSISVALYHTAGKGTRLAPLPGSENNNKSGVKLPAMVEVNDKYVPMTILEAVVKQTGVYASSRRGRLSVFWGDQVFIPSAGV 227
BLAST of mRNA_E-fasciculatus_F_contig10373.308.1 vs. uniprot
Match: F0YEC3_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEC3_AURAN) HSP 1 Score: 178 bits (451), Expect = 1.310e-50 Identity = 95/139 (68.35%), Postives = 112/139 (80.58%), Query Frame = 1
Query: 31 LRRGSS--VAKDATVLAVYEDWAGGAGNALGTLYAYQKATALAESKGY-DLAGKMKAGEISVGLYHTAGKGTRLAPMPGSENNNKPGVKLAVTADI--NGKPSPLTILESVVKQTGVYGKSRKGRLSVFWGDQVFIPSV 432
L RG S V K ATVL V+EDW GGAGN LGTLYA++KA ALA++KG DLA ++ AG ++ +YHTAGKGTRLAP+PG+ENNNKPGVKL V A + +G PLTILESVVKQTGVY SRKGRLSVFWGDQ+FIP++
Sbjct: 43 LERGGSTIVPKGATVLCVHEDWNGGAGNGLGTLYAWRKACALAKAKGRGDLAAELAAGTVAAAVYHTAGKGTRLAPLPGAENNNKPGVKLPVVAPLGASGAAVPLTILESVVKQTGVYAASRKGRLSVFWGDQIFIPTL 181
BLAST of mRNA_E-fasciculatus_F_contig10373.308.1 vs. uniprot
Match: A0A6G0X2N7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2N7_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.710e-50 Identity = 93/143 (65.03%), Postives = 107/143 (74.83%), Query Frame = 1
Query: 25 LLLRRGSSVAKDATVLAVYEDWAGGAGNALGTLYAYQKATALAESKG-----YDLAGKMKAGEISVGLYHTAGKGTRLAPMPGSENNNKPGVKLAVTADINGKPSPLTILESVVKQTGVYGKSRKGRLSVFWGDQVFIPSVGV 438
L+ RG + V+AVYEDW GGAGN LGTLYAYQKA +AE K +DL ++KAG ISV LYHTAGKGTRLAP+PGSENNNKPGVKL I G+ P+TILE+V+KQTGVY SR+GRLSV+WGDQVFIPS V
Sbjct: 48 LMATRGEISPANMKVIAVYEDWVGGAGNGLGTLYAYQKA--VAEGKALYGAEFDLTAQLKAGSISVALYHTAGKGTRLAPLPGSENNNKPGVKLPAMITIEGEAVPMTILEAVIKQTGVYATSRRGRLSVYWGDQVFIPSAPV 188
BLAST of mRNA_E-fasciculatus_F_contig10373.308.1 vs. uniprot
Match: A0A2D4BIU5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BIU5_PYTIN) HSP 1 Score: 175 bits (443), Expect = 1.510e-49 Identity = 92/139 (66.19%), Postives = 104/139 (74.82%), Query Frame = 1
Query: 25 LLLRRGSSVAKDATVLAVYEDWAGGAGNALGTLYAYQKATALA-ESKGYDLAGKMKAGEISVGLYHTAGKGTRLAPMPGSENNNKPGVKLAVTADINGKPSPLTILESVVKQTGVYGKSRKGRLSVFWGDQVFIPSVGV 438
L+ RGS +DA V+AV+EDW GGAGN LGTLYAY KA A E G DL ++ GEISV LYHTAGKGTRLAP+PGSENNNK GVKL +N P+TILE+V+KQTGVY SR+GRLSVFWGDQVFIPS V
Sbjct: 39 LMATRGSISPRDARVIAVHEDWDGGAGNGLGTLYAYTKAVAAGRELYGIDLPAQLARGEISVALYHTAGKGTRLAPLPGSENNNKSGVKLPAMVKVNELFVPMTILEAVIKQTGVYASSRRGRLSVFWGDQVFIPSAAV 177
BLAST of mRNA_E-fasciculatus_F_contig10373.308.1 vs. uniprot
Match: A0A0P1AAU9_PLAHL (Protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AAU9_PLAHL) HSP 1 Score: 175 bits (443), Expect = 1.610e-49 Identity = 93/139 (66.91%), Postives = 104/139 (74.82%), Query Frame = 1
Query: 25 LLLRRGSSVAKDATVLAVYEDWAGGAGNALGTLYAYQKATALAESK-GYDLAGKMKAGEISVGLYHTAGKGTRLAPMPGSENNNKPGVKLAVTADINGKPSPLTILESVVKQTGVYGKSRKGRLSVFWGDQVFIPSVGV 438
L+ RGS K A V+AVYEDW GGAGN LGTLYAY KA A A+ G D+ + G ISV LYHTAGKGTRLAP+PGSENNNK GVKL ++ GK P+TILE+VVKQTGVY SR+GRLSVFWGDQVFIPS V
Sbjct: 40 LMATRGSISPKYAKVIAVYEDWDGGAGNGLGTLYAYNKALAAAKKLYGIDVPTLLADGRISVALYHTAGKGTRLAPLPGSENNNKSGVKLPAMVEVTGKHVPMTILEAVVKQTGVYASSRRGRLSVFWGDQVFIPSAEV 178
BLAST of mRNA_E-fasciculatus_F_contig10373.308.1 vs. uniprot
Match: A0A3M6VLU1_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLU1_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.220e-49 Identity = 92/139 (66.19%), Postives = 104/139 (74.82%), Query Frame = 1
Query: 25 LLLRRGSSVAKDATVLAVYEDWAGGAGNALGTLYAYQKATALA-ESKGYDLAGKMKAGEISVGLYHTAGKGTRLAPMPGSENNNKPGVKLAVTADINGKPSPLTILESVVKQTGVYGKSRKGRLSVFWGDQVFIPSVGV 438
L+ R S KDA V+AV+EDW GGAGN LGTLYAY KA + E G D+ + AG ISV LYHTAGKGTRLAP+PGSENNNK GVKL ++ GK P+TILE+VVKQTGVY SR+GRLSVFWGDQVFIPS V
Sbjct: 82 LMATRESISPKDAKVIAVFEDWDGGAGNGLGTLYAYNKAVTVGKELYGIDIPALLAAGSISVALYHTAGKGTRLAPLPGSENNNKSGVKLPAMVEVKGKFVPMTILEAVVKQTGVYASSRRGRLSVFWGDQVFIPSAEV 220 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10373.308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10373.308.1 >prot_E-fasciculatus_F_contig10373.308.1 ID=prot_E-fasciculatus_F_contig10373.308.1|Name=mRNA_E-fasciculatus_F_contig10373.308.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=146bp MVCRHLLILLLRRGSSVAKDATVLAVYEDWAGGAGNALGTLYAYQKATALback to top mRNA from alignment at E-fasciculatus_F_contig10373:2161..3670- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10373.308.1 ID=mRNA_E-fasciculatus_F_contig10373.308.1|Name=mRNA_E-fasciculatus_F_contig10373.308.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1510bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10373:2161..3670- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10373:2161..3670- >mRNA_E-fasciculatus_F_contig10373.308.1 ID=mRNA_E-fasciculatus_F_contig10373.308.1|Name=mRNA_E-fasciculatus_F_contig10373.308.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=876bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10373:2161..3670- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |