mRNA_E-fasciculatus_F_contig10356.301.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10356.301.1 vs. uniprot
Match: D7G8H5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H5_ECTSI) HSP 1 Score: 429 bits (1104), Expect = 6.770e-146 Identity = 215/246 (87.40%), Postives = 222/246 (90.24%), Query Frame = 1
Query: 1 QISFCKGSATDLMDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGEDGIIIVGFWNGNKFGEALQYFYHKHPELCGSLKGAVIDMEDRHLDTTEGYHTHWTTPEEARRVLEESGFNILDITEIGVGVLCTCSGGASIPSPRGGSGAAAVTNPASFLPHPDTLSEDTLIAEEEAHSLNHYGDRQGVKRKQQQAPFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEVLE 738
+ISFCKGSATDL+DIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIK+RTYSQ MKELAGE+GIIIVGFWNGNKFGEALQYFY+KHPELCGSLKGAVIDMEDRHLDT EGYHTHWTTPEEARRVLEESGFN+LDITEIGVGVLCTCSGGAS PSPRGG G A A+FLPHPDTLSEDTLIAEEEAHSLNHYGD FTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVE E
Sbjct: 131 KISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKSRTYSQ-MKELAGENGIIIVGFWNGNKFGEALQYFYYKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGASTPSPRGGGGVATA---ATFLPHPDTLSEDTLIAEEEAHSLNHYGDS-----------FTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACE 361
BLAST of mRNA_E-fasciculatus_F_contig10356.301.1 vs. uniprot
Match: A0A836CC57_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC57_9STRA) HSP 1 Score: 216 bits (549), Expect = 7.420e-63 Identity = 125/260 (48.08%), Postives = 168/260 (64.62%), Query Frame = 1
Query: 1 QISFCKGSATDLMDIVSAH-PSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGEDGIIIVGFWNGNKFGEALQYFYHKHPELCGSLKGAVIDMEDRHLDTTEGYHTHWTTPEEARRVLEESGFNILDITEIGVGVLCTCSGGAS--IPSP------RGGSGAA----AVTNPASFLPHPDTLSEDTLIAEEEAHSLNHYGDRQGVKRKQQQAPFTQYFYRELWGG-LHQHLGLYEDPATIALPANKRVVEVLE 738
++ F +GSAT+L DI+ P++ + S VVTCVNNTIGIFPDAIK TY QQM+ELAG DGI+IVGFWNGNKFG+ALQ+FY ++P+LCG++ GA ID E L T GY THW+TPEEAR VL GF+++D+TE+GVGVLCTC G AS +P P R G G++ AV A+ + +++ D+ + + ++ + + + Q FYRE+WGG +QH+GLY+ A LPA R VE E
Sbjct: 106 RVKFIEGSATELTDIIMREVPTVRSGSV--VVTCVNNTIGIFPDAIKPATY-QQMQELAGPDGIVIVGFWNGNKFGDALQHFYARNPQLCGTMDGADIDWEGHTLTTAGGYRTHWSTPEEARTVLLRYGFDVVDVTEVGVGVLCTCKGRASGKVPPPQLAQPQRRGRGSSRDWTAVAAAATASSNNGSVNGDSRASSPDRRAI------ETAVAALYEDTYQQQFYREVWGGGRNQHIGLYDAAALGGLPAAARAVEACE 356
BLAST of mRNA_E-fasciculatus_F_contig10356.301.1 vs. uniprot
Match: A9UZS4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UZS4_MONBE) HSP 1 Score: 116 bits (291), Expect = 6.410e-26 Identity = 52/100 (52.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 88 VVTCVNNTIGIFPDAIKARTYSQQMKELAGEDGIIIVGFWNGNKFGEALQYFYHKHPELCGSLKGAVIDMEDRHLDTTEGYHTHWTTPEEARRVLEESGF 387
+VTCV NTIGI PD K Y +K LAG DG+++V +WNGN FGEA+Q+FYHK+P+LCG+ G+ ID+ + L T GY T WTTP EA +++ + F
Sbjct: 1224 LVTCVGNTIGIIPDPKKTAIYRAMLK-LAGPDGVVVVVYWNGNCFGEAVQHFYHKNPQLCGTFDGSAIDLVNCSLTTPSGYSTKWTTPAEAETIIKVAIF 1322
BLAST of mRNA_E-fasciculatus_F_contig10356.301.1 vs. uniprot
Match: A0A7S3ZFK8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZFK8_9EUKA) HSP 1 Score: 110 bits (276), Expect = 9.200e-25 Identity = 69/226 (30.53%), Postives = 113/226 (50.00%), Query Frame = 1
Query: 10 FCKGSATDLMDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGEDGIIIVGFWNGNKFGEALQYFYHKHPELCGSLKGAVIDMEDRHLDTTEGYHTHWTTPEEARRVLEESGFNILDITEIGVGVLCTCSGGASIPSPRGGSGAAAVTNPASFLPHPDTLSEDTLIAEEEAHSLNHYGDRQGVKRKQQQAPFTQYFYRELWGGLHQHLGLYED 687
F G +L ++++ + S D + VV VNNT GI P+ ++ ++ M + + G+II+G WNGN FG+A+Q+FY ++ LCGSL+GA D ++ + T Y T WT PEE ++++ES +N+LD+ G +L P+ +T +D E A + +Y D + R FY+ WGG + H+GLY++
Sbjct: 103 FTLGDCRELKNVLNDNYSEDMQDSFKVVFSVNNTHGILPEKVRD-DINKAMADTTSDSGMIIIGLWNGNSFGDAVQHFYAQNDHLCGSLQGASFDWDECKMVTASNYTTKWTKPEELGKMIDES-WNVLDVVSSGPMLLIAAK-------PK------------------NTKVQDNASGEAGAET-EYYYDTEDASR----------FYQNFWGGENVHIGLYDN 290
BLAST of mRNA_E-fasciculatus_F_contig10356.301.1 vs. uniprot
Match: T0PZS2_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PZS2_SAPDV) HSP 1 Score: 71.2 bits (173), Expect = 1.490e-10 Identity = 41/142 (28.87%), Postives = 71/142 (50.00%), Query Frame = 1
Query: 16 KGSATDLMDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGEDGIIIVGFWNGNKFGEALQYFYHKHPELCGS-LKGAVIDMEDRHLDTTEG-YHTHWTTPEEARRVLEESGFNILDITEIGVGVLCTC 435
+G+A +L ++ D + VV V NT GI P I+ Q M E+AG+DG++++G W+ + F ++ +Y K+P L G + A+ D L Y +HW + +E R + + +D+ G+G+ TC
Sbjct: 280 EGNALELKALLQEKMPADFWTTKRVVAIVMNTFGILPAHIRQGVVDQ-MLEVAGDDGVVVIGCWHADSFRRGVEEYYMKNPALVGDHVTHAMCDYAKAQLYVPSSKYESHWWSEDELRGFVHHAVGVSVDVHVAGIGIFLTC 420
BLAST of mRNA_E-fasciculatus_F_contig10356.301.1 vs. uniprot
Match: A0A024UP09_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UP09_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 3.100e-9 Identity = 42/147 (28.57%), Postives = 74/147 (50.34%), Query Frame = 1
Query: 16 KGSATDLMDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGEDGIIIVGFWNGNKFGEALQYFYHKHPELCGSLKGAVIDMEDRHLDT----TEGYHTHWTTPEEARRVLEE---SGFNILDITEIGVGVLCTC 435
+G+A +L I+ D ++ VV + NT GI P+AI+ Q M ++AG+DG++++G W+ F + +Y K+P L G +DM D + Y +HW + E +R ++ +G+ + E G+G+ TC
Sbjct: 286 EGNALELEAILKRTMPADFWTSTRVVAILMNTFGILPEAIRQGVIDQ-MIDVAGDDGVVVIGCWHSESFRRGVHEYYMKNPALVGD--NVTLDMCDFTTSDLWVPSSKYESHWFSAAELKRFVQAHAANGYAVSTHVE-GIGIFLTC 428
BLAST of mRNA_E-fasciculatus_F_contig10356.301.1 vs. uniprot
Match: A0A3M6K3W8_9ARCH (Class I SAM-dependent methyltransferase n=2 Tax=Nitrosopumilaceae TaxID=338190 RepID=A0A3M6K3W8_9ARCH) HSP 1 Score: 57.8 bits (138), Expect = 2.720e-6 Identity = 28/98 (28.57%), Postives = 50/98 (51.02%), Query Frame = 1
Query: 88 VVTCVNNTIGIFPDAIKARTYSQQMKELAGEDGIIIVGFWNGNKFGEALQYFYHKHPELCGSLKGAVIDMEDRHLDTTEGYHTHWTTPEEARRVLEES 381
VV C NT+G+ P K +++ MK +AG++G++I+ +NG+ FG YH + + D E+R + G+ + W T E +L+ +
Sbjct: 130 VVMCTYNTLGVVPSD-KRQSFIDNMKIIAGKNGMVILTMFNGDDFGFVAPKMYHSMIPMIKKIDDDSFDEENRVFHNSLGFRSQWFTKNEINSLLDST 226
BLAST of mRNA_E-fasciculatus_F_contig10356.301.1 vs. uniprot
Match: A0A7J9QS46_9ARCH (Class I SAM-dependent methyltransferase n=1 Tax=Nitrosopumilaceae archaeon TaxID=2202732 RepID=A0A7J9QS46_9ARCH) HSP 1 Score: 56.6 bits (135), Expect = 6.600e-6 Identity = 30/110 (27.27%), Postives = 53/110 (48.18%), Query Frame = 1
Query: 55 HPSID---NTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGEDGIIIVGFWNGNKFGEALQYFYHKHPELCGSLKGAVIDMEDRHLDTTEGYHTHWTTPEEARRVLE 375
+PSID + + + C+ NT+G+ P + K + MK LAG++G+ +V +NG+ F A YH E+ + D + + GY++ W T + L+
Sbjct: 112 NPSIDELFDDDSAKITMCMYNTVGVIPPS-KRHQFFDNMKRLAGKEGLALVSAFNGDDFAFAAPKMYHPMKEMVKKIDEDSFDEKRLAFRNSLGYYSQWFTKNQLNNFLD 220
BLAST of mRNA_E-fasciculatus_F_contig10356.301.1 vs. uniprot
Match: A0A3M6KGK9_9ARCH (Class I SAM-dependent methyltransferase n=1 Tax=Candidatus Nitrosopelagicus sp. TaxID=2026808 RepID=A0A3M6KGK9_9ARCH) HSP 1 Score: 56.2 bits (134), Expect = 9.740e-6 Identity = 28/105 (26.67%), Postives = 50/105 (47.62%), Query Frame = 1
Query: 58 PSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGEDGIIIVGFWNGNKFGEALQYFYHKHPELCGSLKGAVIDMEDRHLDTTEGYHTHWTTPEEARRVL 372
P +S PT+V C+ NT+G+ P K + + M+ +AG+DG+ I+ +NG+ FG Y + + D ++R G+ + W E + +L
Sbjct: 126 PEHFESSGPTIVMCLYNTLGVIP-LDKRQMFVDNMRSIAGDDGLTILTAFNGDNFGFVAPKIYRPMMPMIKQIDDNSFDEKNRIFQNNLGFRSQWFKQNELKSLL 229 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10356.301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10356.301.1 >prot_E-fasciculatus_F_contig10356.301.1 ID=prot_E-fasciculatus_F_contig10356.301.1|Name=mRNA_E-fasciculatus_F_contig10356.301.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=255bp QISFCKGSATDLMDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYback to top mRNA from alignment at E-fasciculatus_F_contig10356:31..4494+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10356.301.1 ID=mRNA_E-fasciculatus_F_contig10356.301.1|Name=mRNA_E-fasciculatus_F_contig10356.301.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4464bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10356:31..4494+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10356:31..4494+ >mRNA_E-fasciculatus_F_contig10356.301.1 ID=mRNA_E-fasciculatus_F_contig10356.301.1|Name=mRNA_E-fasciculatus_F_contig10356.301.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1530bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10356:31..4494+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |