mRNA_E-fasciculatus_F_contig10341.293.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10341.293.1 vs. uniprot
Match: A0A6H5KBR7_9PHAE (GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR7_9PHAE) HSP 1 Score: 549 bits (1414), Expect = 9.090e-194 Identity = 279/321 (86.92%), Postives = 291/321 (90.65%), Query Frame = 1
Query: 1 MFYSRRFMVGVGSLASLLVFVGVTLQGGGDVQSSLSFESVVRSVASHPTASGSSAVGDGK-EIGEPNSSSQHRGLFDRSAHDGRGERRARLAFLIMSSGDDIAKLSVLLPEIYHQDNIYLVHVDAKAPPEQTDKIREVVSANFPAVDGRPSNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDDGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGISFMDGELMTGFEKRWQGYTEDQGLQRGADRHTSVAMQTLGRIRRAYPQRFRLYKGEFWGVFHRSFCEYVSWSPDNVARTLSAYFTGYRISDESYFQTLACHPE 960
MF S+R +V VG LA+LLVF V LQG +V+ +LS SV RS+ASH TASGSSA GDGK EI E NSSSQHRGLFDR A DGRGERRARLAFLIMSSGDDIAKLSVLLPEIYH DNIYLVHVDAKAP EQT+KIREVV ANFPA DGRPSNG+LLEPAGIVSWGGFSITLACLYGIAAALLWD+GWDYFINLSTSDFPVVTQDEMTLFLGEHADAG+SFMDGE MTGFEKRWQGYTEDQGL R AD HTSVAMQTLGRI+RAYPQRFRLYKGEFWG FHRSFCEY SWSPDNVARTLSAYFTGYRISDESYFQTLACHPE
Sbjct: 1 MFCSQRLVVVVGLLAALLVFAEVALQGSWNVERNLSVTSVDRSIASHTTASGSSAFGDGKKEIAEFNSSSQHRGLFDRGARDGRGERRARLAFLIMSSGDDIAKLSVLLPEIYHPDNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGEPMTGFEKRWQGYTEDQGLHRRADHHTSVAMQTLGRIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTLACHPE 321
BLAST of mRNA_E-fasciculatus_F_contig10341.293.1 vs. uniprot
Match: D8LDZ1_ECTSI (Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ1_ECTSI) HSP 1 Score: 504 bits (1299), Expect = 2.030e-175 Identity = 248/267 (92.88%), Postives = 253/267 (94.76%), Query Frame = 1
Query: 163 AVGDGK-EIGEPNSSSQHRGLFDRSAHDGRGERRARLAFLIMSSGDDIAKLSVLLPEIYHQDNIYLVHVDAKAPPEQTDKIREVVSANFPAVDGRPSNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDDGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGISFMDGELMTGFEKRWQGYTEDQGLQRGADRHTSVAMQTLGRIRRAYPQRFRLYKGEFWGVFHRSFCEYVSWSPDNVARTLSAYFTGYRISDESYFQTLACHPE 960
A GDGK EIGE NSSSQHRGLFD+ A DGRGERRARLAFLIMSSGDDIAKLSVLLPEIYH DNIYLVHVDAKAP EQT+KIREVV ANFPA DGRP NGRLLEPAGIVSWGGFSITLACLYGIAAALLWD+GWDYFINLSTSDFPVVTQDEMTLFLGEHADAG+SFMDGELMTGFEKRWQGYTEDQGLQR AD HTSVAMQTLGRI+RAYPQRFRLYKGEFWG FHRSFCEY SWSPDNVARTLSAYFTGYRISDESYFQTLACHPE
Sbjct: 115 AFGDGKKEIGEVNSSSQHRGLFDQGARDGRGERRARLAFLIMSSGDDIAKLSVLLPEIYHPDNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPPNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGELMTGFEKRWQGYTEDQGLQRRADHHTSVAMQTLGRIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTLACHPE 381
BLAST of mRNA_E-fasciculatus_F_contig10341.293.1 vs. uniprot
Match: A0A6H5L6Q9_9PHAE (Protein xylosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6Q9_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.630e-56 Identity = 112/239 (46.86%), Postives = 154/239 (64.44%), Query Frame = 1
Query: 253 ERRARLAFLIMSSG-DDIAKLSVLLPEIYHQDNIYLVHVDAKAPPEQTDKIREVVSANFPAVDGRPSNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDDGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGISFMDGELMTGFEKRWQGYTEDQGLQRGADRHTSVAMQTLGRIRRAYP---QRFRLYKGEFWGVFHRSFCEYVSWSPDNVARTLSAYFTGYRISDESYFQTLACHP 957
E+RAR+ +LIMSSG +++ K LL IY +N YLVH+D K DK + +F N R+LEPA VSWGG++ITL ++GI + W+D WD+FINLS SDFP++ Q E+T LG++AD G++F+ GE + R + +DQGL R ++ +S A + L + P F +YKGEFW + HRSFC+Y+ SPDNVAR+L AYF+ +RISDESYFQT+ CHP
Sbjct: 171 EKRARIGYLIMSSGTEELHKTKRLLKAIYDPNNFYLVHLDRK------DK--HSIRRDFENFIEEWDNVRMLEPALDVSWGGYTITLTAIFGICTMVQWNDEWDFFINLSASDFPLLPQSELTTVLGKYADVGMNFVSGEPLNE-RNRAEVLIDDQGLYR--EKQSSKAGRPLKVGKARLPPSKSMFTVYKGEFWVILHRSFCKYLEASPDNVARSLQAYFSKFRISDESYFQTVLCHP 398
BLAST of mRNA_E-fasciculatus_F_contig10341.293.1 vs. uniprot
Match: A0A6H5L1U8_9PHAE (GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1U8_9PHAE) HSP 1 Score: 190 bits (483), Expect = 4.040e-53 Identity = 104/244 (42.62%), Postives = 146/244 (59.84%), Query Frame = 1
Query: 250 GERRARLAFLIMSSGD-DIAKLSVLLPEIYHQDNIYLVHVDAKAPPEQTDKIREVVSANFPAVDGRPSNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDDGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGISFMDGELMTGFEKRWQGYTEDQGLQRGADRHTS----VAMQTLG---RIRRAYPQRFRLYKGEFWGVFHRSFCEYVSWSPDNVARTLSAYFTGYRISDESYFQTLACHP 957
G R AR AFLIM+ G D+ L +P +Y N +L+H+D K+ + +RE++ N R+LEPA VSWGG+SITL L+G++ + W WDYFINLS +DFP+++ EM++ +G ++ ++F+ G M + R + Y +DQGL R + + + + G R+ R P F L+KGEFW HR FCEYV SPDNVAR+L AYF +RISDES+FQT CHP
Sbjct: 124 GTRPARFAFLIMAHGPADVELLRRNVPWLYSPLNFFLIHMDRKSSDKDRADVRELLHGL--------DNARILEPAQSVSWGGYSITLTALFGLSTLVEWSRDWDYFINLSATDFPLLSSAEMSVAMGSFVESRMNFVTGSAMME-QNRAELYVDDQGLYRVNETRRAAQPFLQRRQSGPPVRVERPLPNLFTLFKGEFWVALHRDFCEYVHESPDNVARSLQAYFAKFRISDESFFQTTLCHP 358
BLAST of mRNA_E-fasciculatus_F_contig10341.293.1 vs. uniprot
Match: A0A835YZY2_9STRA (Core-2/I-branching enzyme-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY2_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.090e-45 Identity = 104/245 (42.45%), Postives = 141/245 (57.55%), Query Frame = 1
Query: 262 ARLAFLIMSSGD-DIAKLSVLLPEIYHQDNIYLVHVDAKAPPEQTDKIREVVSANFPAVDGRPSNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDDGWDYFINLSTSDFPVVTQDEMTLFLGEHA-DAGISFMDGELMTGFEK----RWQGYTEDQGLQRGADR---HTSV---AMQTLGRIRRAYPQRFRLYKGEFWGVFHRSFCEYVSWSPDNVARTLSAYFTGYRISDESYFQTLACHPE 960
A++ F I SG D LS LL ++HQDN+YL+HVDAKA IR V+ P N +L++ VSWG FS+ L L+G+++A+ W WD++INLS +D P++T DEM L LG + D +SFM G +E+ R Y +D+GL R R SV A + + + R P F +YKGEFW V HRS EY+ SPDNVAR++ Y ISDE +FQT+ACHP+
Sbjct: 42 AKILFSITISGSRDALALSTLLRALWHQDNLYLLHVDAKALASDMAAIRNVIKQ---VAGADPKNIKLVDNPVQVSWGRFSMLLTALHGLSSAIGWSSQWDFWINLSPADMPLLTADEMRLVLGALSRDRPVSFM-GCTRPDWEQVRPDRRHTYMDDEGLYRSLPRPRGRLSVIQHAPKPMRGVARPPPDLFDVYKGEFWVVLHRSLAEYIHHSPDNVARSVYLYLAATYISDELFFQTVACHPK 282
BLAST of mRNA_E-fasciculatus_F_contig10341.293.1 vs. uniprot
Match: A0A6H5KJT8_9PHAE (Protein xylosyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT8_9PHAE) HSP 1 Score: 167 bits (424), Expect = 1.070e-44 Identity = 95/248 (38.31%), Postives = 132/248 (53.23%), Query Frame = 1
Query: 256 RRARLAFLIMSSG-DDIAKLSVLLPEIYHQDNIYLVHVDAKAPPEQTDKIREVVSANFPAVDGRPSNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDDGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGISFMDGELMTGFEKRWQGY---------TEDQGLQRGADRHTSVAMQTLGR----IRRAYPQRFRLYKGEFWGVFHRSFCEYVSWSPDNVARTLSAYFTGYRISDESYFQTLACHP 957
++AR+ F IM + ++ L LL +YH D+ +LVH+D KA + + N R ++PA V+WGGF++TL +YG+ AL W+ WDYFINLS SD P++ DE+ LGEH SF+ G +E W+GY ED+ + R R L +RR P F ++KGEFW + HRS EYV S DN AR L YF+G +SDE +FQT+AC+P
Sbjct: 85 QKARVVFYIMVANLQELPGLDALLRTLYHVDHFFLVHLDVKASALARQGVESGIERMLDERGNGERNVRFVDPAMPVTWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFK---YEPSWEGYKFVDRREMFAEDEAVMRDTGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSRDNQARMLLTYFSGMIVSDEEFFQTVACNP 329
BLAST of mRNA_E-fasciculatus_F_contig10341.293.1 vs. uniprot
Match: D8LCA7_ECTSI (Protein xylosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA7_ECTSI) HSP 1 Score: 160 bits (406), Expect = 1.660e-43 Identity = 89/233 (38.20%), Postives = 124/233 (53.22%), Query Frame = 1
Query: 298 DIAKLSVLLPEIYHQDNIYLVHVDAKAPPEQTDKIREVVSANFPAVDGRPSNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDDGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGISFMDGELMTGFEKRWQGY---------TEDQGLQRGADRHTSVAMQTLGR----IRRAYPQRFRLYKGEFWGVFHRSFCEYVSWSPDNVARTLSAYFTGYRISDESYFQTLACHP 957
++ L LL +YH D+ +LVH+D KA + + + N R + PA ++WGGF++TL +YG+ AL W+ WDYFINLS SD P++ +DE+ LGEH SF+ G +E W+GY ED+ + R R L +RR P F ++KGEFW + HRS EYV SPDN AR L Y +G +SDE +FQT+AC+P
Sbjct: 7 ELPGLDALLRTLYHVDHFFLVHLDVKASAQARQGVESRIERVLDERGNGERNVRFVSPAMPITWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLL-KDEIAGILGEHKAGNTSFITGFK---YEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAHKEMLRRPMPNIFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYSSGMMVSDEEFFQTVACNP 235
BLAST of mRNA_E-fasciculatus_F_contig10341.293.1 vs. uniprot
Match: A0A6P3ZYR5_ZIZJJ (beta-glucuronosyltransferase GlcAT14A-like n=3 Tax=Rhamnaceae TaxID=3608 RepID=A0A6P3ZYR5_ZIZJJ) HSP 1 Score: 127 bits (318), Expect = 1.060e-29 Identity = 81/239 (33.89%), Postives = 131/239 (54.81%), Query Frame = 1
Query: 256 RRARLAFLIMSSGDDIAKLSVLLPEIYHQDNIYLVHVDAKAPPEQTDKIREVVSAN--FPAVDGRPSNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDDGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGISFMDGELMTGFE--KRWQGYTEDQGLQRGADRHTSVAMQTLGRIRRAYPQRFRLYKGEFWGVFHRSFCEYVSWSPDNVARTLSAYFTGYRISDESYFQTLACHPE 960
R RLA+LI + D ++ L +YH N Y++H+D +APP + ++ V A+ F VD N R++ + +V++ G ++ L IA L WD+FINLS SD+P+VTQD++ L + + ++F++ +TG++ +R + D GL + + +A T RR+ P F+L+ G W + RSF EY W DN+ RT+ Y+T + S E YFQT+ C+ E
Sbjct: 85 RLPRLAYLISGTKGDSHRMMRTLQAVYHPRNQYVLHLDLEAPPRERLELAVSVKADPTFREVD----NVRVMAQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLVTQDDL-LHVFSNMSRNLNFIEQMQITGWKLNQRAKPIIIDPGLY--LSKKSDIAWTTQ---RRSLPTSFKLFTGSAWVMLTRSFVEYCIWGWDNLPRTILMYYTNFISSPEGYFQTVICNTE 313
BLAST of mRNA_E-fasciculatus_F_contig10341.293.1 vs. uniprot
Match: A0A811MZV1_9POAL (Hypothetical protein n=3 Tax=Andropogoneae TaxID=147429 RepID=A0A811MZV1_9POAL) HSP 1 Score: 125 bits (315), Expect = 2.770e-29 Identity = 85/246 (34.55%), Postives = 125/246 (50.81%), Query Frame = 1
Query: 232 SAHDGRGERRAR----LAFLIMSSGDDIAKLSVLLPEIYHQDNIYLVHVDAKAPPEQTDKIREVVSANFPAVDGRPSNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDDGWDYFINLSTSDFPVVTQDE-MTLFLGEHADAGISFMDGELMTGFEKRWQGYTEDQGLQRGADRHTSVAMQTLGRIRRAYPQRFRLYKGEFWGVFHRSFCEYVSWSPDNVARTLSAYFTGYRISDESYFQTLACH 954
SA +G +++AR A+LI +S D ++ + LL +YH N YLVH+D +AP E+ ++ E+VS + V R N ++ +V++ G ++ L+ +A L WD+FINLS SD+P+VTQD+ M F G D L +KR + D L + +RR P F+LY G W + RSF EYV+ DN+ RTL Y S E YFQT+AC+
Sbjct: 53 SADEGEEQQQARYPVRFAYLISASTGDASRAARLLAALYHPANTYLVHLDREAPAEEHRRLAELVSGS---VYARAGNVWIVGRPNLVTYRGPTMLTTTLHAVAVLLRLRRRWDWFINLSASDYPLVTQDDLMEAFAGMPRDLSFIQHTSHLGWKIKKRARPVILDTALYEDGRAELIRPVNITSNLRRL-PTAFKLYTGSAWTMLSRSFAEYVTMGWDNLPRTLLLYHANIISSPEFYFQTVACN 294
BLAST of mRNA_E-fasciculatus_F_contig10341.293.1 vs. uniprot
Match: A0A1E5VJF6_9POAL (Beta-glucuronosyltransferase GlcAT14B n=6 Tax=Paniceae TaxID=147428 RepID=A0A1E5VJF6_9POAL) HSP 1 Score: 125 bits (314), Expect = 3.540e-29 Identity = 80/232 (34.48%), Postives = 117/232 (50.43%), Query Frame = 1
Query: 262 ARLAFLIMSSGDDIAKLSVLLPEIYHQDNIYLVHVDAKAPPEQTDKIREVVSANFPAVDGRPSNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDDGWDYFINLSTSDFPVVTQDE-MTLFLGEHADAGISFMDGELMTGFEKRWQGYTEDQGLQRGADRHTSVAMQTLGRIRRAYPQRFRLYKGEFWGVFHRSFCEYVSWSPDNVARTLSAYFTGYRISDESYFQTLACH 954
A A+LI +S D + + LL +YH N YL+H+D +APPE+ ++ E+VS V R N ++ +V++ G ++ L+ +A L WD+F+NLS SD+P+VTQD+ M F G D L +KR + D L + +RR +P F+LY G W + RSF EYV+ DN+ RTL Y S E YFQT+AC+
Sbjct: 73 ASFAYLISASSGDAGRAARLLAALYHPANSYLLHLDREAPPEEHRRLAELVSGR--GVYARAGNVWIVGRPNLVTYRGPTMLTTTLHAVALLLRLRRRWDWFVNLSASDYPLVTQDDLMEAFAGLPRDLNFIQHTSHLGWKIKKRARPVILDTALYEDGRAELIRPVNITTNLRR-FPTAFKLYTGSAWTMLSRSFAEYVTMGWDNLPRTLLLYHANIISSPEFYFQTVACN 301 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10341.293.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10341.293.1 >prot_E-fasciculatus_F_contig10341.293.1 ID=prot_E-fasciculatus_F_contig10341.293.1|Name=mRNA_E-fasciculatus_F_contig10341.293.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=320bp MFYSRRFMVGVGSLASLLVFVGVTLQGGGDVQSSLSFESVVRSVASHPTAback to top mRNA from alignment at E-fasciculatus_F_contig10341:17..2749- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10341.293.1 ID=mRNA_E-fasciculatus_F_contig10341.293.1|Name=mRNA_E-fasciculatus_F_contig10341.293.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2733bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10341:17..2749- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10341:17..2749- >mRNA_E-fasciculatus_F_contig10341.293.1 ID=mRNA_E-fasciculatus_F_contig10341.293.1|Name=mRNA_E-fasciculatus_F_contig10341.293.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1920bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10341:17..2749- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |