mRNA_E-fasciculatus_F_contig10318.278.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10318.278.1 vs. uniprot
Match: D8LIC9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIC9_ECTSI) HSP 1 Score: 1041 bits (2692), Expect = 0.000e+0 Identity = 675/813 (83.03%), Postives = 688/813 (84.62%), Query Frame = 1
Query: 1 QLRQMGTPASDTDTSSGESTLESDTESNADLASPPTVECSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAGSASLVGGPHRDSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAXXXXXLNAXXXGKGRSGGLPAWRLALKRPLEELTPKERALEKVCRYLDKFGDMFSPQAQLKAAAEARDKDKAAMLGGRGQNNAPCAPAAAAVLGQTGLWGSLMGAPAKVEEETESTDGEDEDIGMIDSEGPNKRADRKAALRRQQEILRKDIESLQARAVLQEKRLNGLGAAIPPHAARQAKRDREWREFLDRRTSGSXXXXXXXXXXXXXSASKESAKHPPASPAASGTAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISSSRAYGSSAFRGVNLNGNRWLARISQASGDGKKKSLGGYATEEEAAKAYDRAALQLFGPSAVTNFKDGKRVQLEGRSQRSGGXXXXXGS-CKAKPSPGARPLDAAKEPVERPREQQYSGDTGSGQEESSTPAKPPVSSPESTPDRVETPAEAGAAASAEDANGGASAPESENVDIGGNTPSGPPLEVGAADYADEEEMDVVTPAAVA--VPSPQKVVPSSTSESLSEPGVPPGYVSVFQGHSAPVVAAAAAYAHPGFAAPAPAGSADNVMWPGPAPAGHPGFNPYGAASVGNAYGLQYGGAPAGYRQAQHSPTGIASGLAAXXXXXXXXXXXXEHNQALMNGKGPPAAYSAPAPGYGMYGAHPVFFHGQQPGSSDGASGFALSASSAMPGMPQQPATHQDQKSANPPPKVP 2430
+L Q GTPASDTDTSSGESTLESDTESNADLASPPT ECSS XXXXXXXXXXXX AVAGSAS VGGPHRDS+G XXXXXXXXXXXXXXXXXXXXX GV LNA GKGRSGGL AWRLALKRPLEELTPKERALEKVCRYLDKFGDMFSPQAQLKAAAEARDKDKAAMLGGRG NNAP APAAAAVLGQTGLWGSLMGAPAKVEEETESTDGEDEDIGMIDSEGPNK ADRKAALRRQQEILRKDIE+LQARAVLQEKRLNGLGAAIPPHAARQAKRDREWREFLDRRTS S SAS+ SAKHPPASPAASGTA XXXXXXXXXXXXXXX XXXXX SSRAYGSSAFRGVNLNGNRWLARISQ DGKKKSLGGYATEEEAAKAYDRAALQLFGP AVTNFKDGKRVQLEGRSQRSGGXXXXX CK KPSP ARP+DAAKEPVERPRE+Q SGD S QE STPAKPPV+SPE+TPD +ETP EA AAASAE+ANGGASAPESENVDIGG+TPS P LEVGAAD+ADEEEMDVVTPAA A VPS +KVVPSS ESLSEPGVPPGYVSVFQGHSAPVVAAAAAYAHPGFA PAPAGSAD VMWPGPAPAGHPGFNPYGAASVGNAYGLQYGGAPAGYRQAQHSPTGIASGLAAXXXXXXXXXXXXEHNQALMNGKGPPAAYSA APGYGMYGAHPVFFHGQQPGSSDGASGFALSA SAMPGMPQQ QD KS NPPPK P
Sbjct: 451 ELHQTGTPASDTDTSSGESTLESDTESNADLASPPTAECSSSXXXXXXXXXXXXPSCTA------------AVAGSASSVGGPHRDSLGGXXXXXXXXXXXXXXXXXXXXXLLLSTGV---SHFEGLNAAGGGKGRSGGLSAWRLALKRPLEELTPKERALEKVCRYLDKFGDMFSPQAQLKAAAEARDKDKAAMLGGRGHNNAPSAPAAAAVLGQTGLWGSLMGAPAKVEEETESTDGEDEDIGMIDSEGPNKCADRKAALRRQQEILRKDIENLQARAVLQEKRLNGLGAAIPPHAARQAKRDREWREFLDRRTSDSSAATASPRP----SASEGSAKHPPASPAASGTAXXXXXXXXXXXXXXXXPSSANGGDSASSPGCSSLSRGSGDRGXXXXXXXXSSRAYGSSAFRGVNLNGNRWLARISQ---DGKKKSLGGYATEEEAAKAYDRAALQLFGPGAVTNFKDGKRVQLEGRSQRSGGXXXXXXXXCKPKPSPAARPVDAAKEPVERPREEQDSGDAVSSQEACSTPAKPPVASPENTPDSLETPKEAVAAASAEEANGGASAPESENVDIGGSTPSDPLLEVGAADHADEEEMDVVTPAAAAAAVPSSEKVVPSSAPESLSEPGVPPGYVSVFQGHSAPVVAAAAAYAHPGFAPPAPAGSADTVMWPGPAPAGHPGFNPYGAASVGNAYGLQYGGAPAGYRQAQHSPTGIASGLAAXXXXXXXXXXXXEHNQALMNGKGPPAAYSAAAPGYGMYGAHPVFFHGQQPGSSDGASGFALSAPSAMPGMPQQQGAQQDHKSVNPPPKAP 1241
BLAST of mRNA_E-fasciculatus_F_contig10318.278.1 vs. uniprot
Match: UPI000E7006E4 (AP2-like ethylene-responsive transcription factor AIL1 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E7006E4) HSP 1 Score: 60.8 bits (146), Expect = 6.540e-7 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 1222 GSSAFRGVNLNGNRWLARISQASGDGKKKSLGGYATEEEAAKAYDRAALQLFGPSAVTNF 1401
G+S +RGV +G RW ARI + K SLG + T+EEAAKAYD AAL+ G SAVTNF
Sbjct: 75 GASIYRGVRRSGERWQARIRVPN---KYLSLGTFGTQEEAAKAYDIAALKYRGASAVTNF 131
BLAST of mRNA_E-fasciculatus_F_contig10318.278.1 vs. uniprot
Match: A9TR37_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TR37_PHYPA) HSP 1 Score: 59.3 bits (142), Expect = 8.470e-7 Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 1204 SSSRAYGSSAFRGV--NLNGNRWLARISQASGDGKKKSLGGYATEEEAAKAYDRAALQLFGPSAVTNF 1401
SS + G S +RGV + + RW ARI + G+ K LG + T+EEAA+AYDRAA++ GP+AVTNF
Sbjct: 57 SSGFSRGVSKYRGVARHHHNGRWEARIGRVDGN-KYLYLGTFGTQEEAARAYDRAAIEYRGPAAVTNF 123
BLAST of mRNA_E-fasciculatus_F_contig10318.278.1 vs. uniprot
Match: UPI000E7056AC (AP2-like ethylene-responsive transcription factor AIL1 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E7056AC) HSP 1 Score: 61.2 bits (147), Expect = 9.510e-7 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 1222 GSSAFRGVNLNGNRWLARISQASGDGKKKSLGGYATEEEAAKAYDRAALQLFGPSAVTNF 1401
G+S +RGV +G RW ARI + K SLG + T+EEAAKAYD AAL+ G SAVTNF
Sbjct: 115 GASIYRGVRRSGERWQARIRVPN---KYMSLGTFGTQEEAAKAYDIAALKYRGASAVTNF 171
BLAST of mRNA_E-fasciculatus_F_contig10318.278.1 vs. uniprot
Match: A0A5A7QM56_STRAF (AP2-like ethylene-responsive transcription factor n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QM56_STRAF) HSP 1 Score: 62.0 bits (149), Expect = 1.240e-6 Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 1204 SSSRAYGSSAFRGV--NLNGNRWLARISQASGDGKKKSLGGYATEEEAAKAYDRAALQLFGPSAVTNF 1401
SS + G S +RGV + + RW ARI + SG+ K LG Y+T+EEAAKAYD AA+Q GP+AVTNF
Sbjct: 77 SSGFSRGVSKYRGVARHHHNGRWEARIGRVSGN-KYLYLGTYSTQEEAAKAYDLAAIQQRGPNAVTNF 143
BLAST of mRNA_E-fasciculatus_F_contig10318.278.1 vs. uniprot
Match: J3LN62_ORYBR (AP2/ERF domain-containing protein n=2 Tax=Oryza brachyantha TaxID=4533 RepID=J3LN62_ORYBR) HSP 1 Score: 60.5 bits (145), Expect = 1.240e-6 Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 1
Query: 1204 SSSRAYGSSAFRGVNLNGN--RWLARISQASGDGKKKSLGGYATEEEAAKAYDRAALQLFGPSAVTNFKDGKRVQLEGRSQ 1440
SS + G+S +RGV + RW ARI + +G+ K LG +ATEEEAA+AYD AAL+ G +AVTNF+ R LE SQ
Sbjct: 17 SSGFSRGASIYRGVTRHHQHGRWQARIGRVAGN-KDLYLGTFATEEEAAEAYDIAALKFRGVNAVTNFEP-SRYNLEAISQ 95
BLAST of mRNA_E-fasciculatus_F_contig10318.278.1 vs. uniprot
Match: A0A4Y7L2Q8_PAPSO (Uncharacterized protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7L2Q8_PAPSO) HSP 1 Score: 59.7 bits (143), Expect = 1.600e-6 Identity = 35/64 (54.69%), Postives = 44/64 (68.75%), Query Frame = 1
Query: 1216 AYGSSAFRGVNLN--GNRWLARISQASGDGKKKSLGGYATEEEAAKAYDRAALQLFGPSAVTNF 1401
A G+S +RGV G RW ARI + +G G+ LG Y TEEEAA+AYD AA++L G SA+TNF
Sbjct: 84 ARGNSIYRGVTRQHEGRRWQARIGRVAG-GRDIYLGTYDTEEEAAEAYDIAAVKLRGMSAITNF 146
BLAST of mRNA_E-fasciculatus_F_contig10318.278.1 vs. uniprot
Match: A0A8J5X2X2_ZIZPA (AP2/ERF domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5X2X2_ZIZPA) HSP 1 Score: 62.0 bits (149), Expect = 1.750e-6 Identity = 41/81 (50.62%), Postives = 52/81 (64.20%), Query Frame = 1
Query: 1204 SSSRAYGSSAFRGVNLNGN--RWLARISQASGDGKKKSLGGYATEEEAAKAYDRAALQLFGPSAVTNFKDGKRVQLEGRSQ 1440
SS + G+S +RGV + RW ARI + +G+ K LG +ATEEEAA+AYD AAL+ G SAVTNF+ R LE SQ
Sbjct: 154 SSGFSRGASIYRGVTRHHQHGRWQARIGRVAGN-KDLYLGTFATEEEAAEAYDIAALKFRGASAVTNFEP-SRYNLEAISQ 232
BLAST of mRNA_E-fasciculatus_F_contig10318.278.1 vs. uniprot
Match: A0A5B7BZ65_DAVIN (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BZ65_DAVIN) HSP 1 Score: 57.4 bits (137), Expect = 1.780e-6 Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 1204 SSSRAYGSSAFRGVNLNGN--RWLARISQASGDGKKKSLGGYATEEEAAKAYDRAALQLFGPSAVTNFK 1404
SS + G+S +RGV + RW ARI + +G+ K LG +ATEEEAA+AYD AA++ G +AVTNF+
Sbjct: 33 SSGFSRGASIYRGVTRHHQQGRWQARIGRVAGN-KDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFE 100
BLAST of mRNA_E-fasciculatus_F_contig10318.278.1 vs. uniprot
Match: D8SCE6_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SCE6_SELML) HSP 1 Score: 59.3 bits (142), Expect = 1.860e-6 Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 1204 SSSRAYGSSAFRGVNLNGN--RWLARISQASGDGKKKSLGGYATEEEAAKAYDRAALQLFGPSAVTNF 1401
SS A G+S FRGV + RW ARI + +G+ K LG ++TEEEAA+AYD AA++ G SAVTNF
Sbjct: 85 SSGFARGASRFRGVTRHHQQGRWQARIGRVAGN-KDLYLGTFSTEEEAAEAYDIAAIKFRGASAVTNF 151 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10318.278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10318.278.1 >prot_E-fasciculatus_F_contig10318.278.1 ID=prot_E-fasciculatus_F_contig10318.278.1|Name=mRNA_E-fasciculatus_F_contig10318.278.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=806bp MGTPASDTDTSSGESTLESDTESNADLASPPTVECSSSSCSSSSSSSSSSback to top mRNA from alignment at E-fasciculatus_F_contig10318:29..4934+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10318.278.1 ID=mRNA_E-fasciculatus_F_contig10318.278.1|Name=mRNA_E-fasciculatus_F_contig10318.278.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4906bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10318:29..4934+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10318:29..4934+ >mRNA_E-fasciculatus_F_contig10318.278.1 ID=mRNA_E-fasciculatus_F_contig10318.278.1|Name=mRNA_E-fasciculatus_F_contig10318.278.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4836bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10318:29..4934+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |