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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-11_005240.1 |
| Exons | 2 |
| Model size | 1046 |
| Cds size | 828 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10313.277.1 >prot_E-fasciculatus_F_contig10313.277.1 ID=prot_E-fasciculatus_F_contig10313.277.1|Name=mRNA_E-fasciculatus_F_contig10313.277.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=276bp
MPRAAAAAAAATAFPAGDGGGSTAIDVGGPSTSSAAAPATLAGVAAAPSV
AAAAAAAAAAPPAVARPGTAGVAVTTSVAATALAPPPLTTTVAATTAATL
STPTTTAVAAAAPTTTIAAAAATSAGGAGRGQTGRVTVGAGVSAIKRELQ
PAPPAPLPAPAITAPLSAPPTPLPQASAPIAVATPVATATTYAQPAPGPP
APTTSSVGGMTVAAQPAPAAAVLGMLVKPEPVASGGGGMPTTATAAAATL
PTFSNGTSQQQQQPRPIAVAPTPQAT back to topmRNA from alignment at E-fasciculatus_F_contig10313:2182..4937+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig10313.277.1 ID=mRNA_E-fasciculatus_F_contig10313.277.1|Name=mRNA_E-fasciculatus_F_contig10313.277.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2756bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10313:2182..4937+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCGTGAGCACGACGGCGGGACCGCGGGAGGCAGGAGACTGGTCGGGTAC
GTGATCCTTGCGTTGGGCTTGGCTGTTCCAGTGGAACCGCAGAAGATCAT
CAAGGTGATCGCGTTGTTGGCGTTTGAAAGATGACATGATTTTTTGTAAA
CCCCTTTTTTCACCGCTCGCTTCGTTGTCGGCTGCTGTTGCTGCTGCTGC
TGCTGCGACTAACGTCCCCGAGCCGCCGCTGTTGTGTGTGCGCTCTAACC
GAACCACAAGATCTGTGTGGTGATCTCTAGACATTTTCTCTGTGCGTGTG
GACACTGGCTGCCAGCTGATCCTCGCGACTGTGCCCGCATGGCAGCGTAC
TCTCGTCAGCTTGGAGTGCTAAGCAGCAGGAAGGCACGACACAAAAAAAG
CGGTTGTCGCATCATTCGATAAATTTTTAATTTTTGGAGCAGCAGCAGCC
GCCGGCTTTCGACAGCAGTTCAGTTCAAGGACACAGCAGTCGCACGTCCA
AACGCTGTGGTGCCATGGATACTCTGGTGGGCCACCGGACAACAGCCACG
AGAGATGTCCTTGTATGCTGCAGGAACGCAGCCAACGAAAGTAAAACAAC
GGCCGGCGCTAAGATAGACGACCCGCTGCAACCAACAGCCAACAGCCCTG
CAACAGGCGCGGGACATTCTTCCTCGCTGTTCAAGTAGAGTTTTGGGGAC
ACGTTGCAACAACAAACGCTTTATTGCATGATGCTCTGGGGGCAAAAACT
ACACAGCAGCGTAGCGGGCTGGGTGTTCGATTTTGTGTTTGTCTTGACTG
TGGCCTGGGCCTGCATCGACTGTTGACGTGCCTAGCCGCTCCGAACGCAC
GCACGCATTCTTCTCTTGCTGTACCCACCAGACGTTTCCCTTCTGCAAAC
TGCAACAAAGCAAGTGATGGGCTGTGTGCCCGCCGCAGCGCTACGCTTGC
TCTCTTTGCATGAATGCGTTGTCGAGAACATGAGCGAAAACATGCGCACC
AGAATCGTGCCGGCGCCCAGCCCGTGTGTGCGGGTTGCGTTTCGCGTCGT
TCCGGACTGCTGCTGTATTGTAGTTTTGGATGTAAACGACTTCAAAAGTA
CGCCCTCCCATCCACCTACACTGTGTAATGCTGTTGTTCGCTGGGCCCAG
AGAGCAAGACCATTCCACAAACAAAAGTATACCACGCCGCATATTTTTAT
CTATGTAGCATCTTCAGACCCTCTCGCGAACTCCCTACATGGCACTACGC
GGTGCAGACCGCACGTACACAGCAGTTAGTACGAAAGACGAAAGACTGGA
CAGCAGCAGCCAGCCGTTTGCTTTTCCATCTTGTACAAGTAGTCTACCCG
AGTACAGAAGTAAAAGTAGCCATGTTTATGTATATATGTATACGTCACCC
TCGACTTTTCGATACGACACTTGCACTTCGGAGGACCGCTTTCGCGAGAA
AGGTGTAAAAAAAAGAAAAAGTGTAGAAAATAGAAACATGAGGGGTAGAA
TACTATCCCTCGCCCTAAACCCCCACCCAAACTTCCCCGATTGCATGCTT
TATCCAACTTGTTTAGTCAATAGAAAACCCCGGCTACAAGCATCTACTGA
TTTCGGAACCTTTTTGTTTACATTGTATCTTTTGTGGGGGTGCTTTCCTC
ATTCGTATGTACGCATGTACATGTGTTTCTCCGAAATATCGTGTCGAATG
GGTGCACCTTGGGTGGACGGTAAGAAAACATTGGTCGCCTCTCCTCATCT
TTCTGGCCAGCGAATTCAACCGTCCATCCTGCCGGGCGTCGTTTTCGTTA
CGTTCTATTTCGCAGGCTCATTCCACCTACTACATGTACCGCCGCGGGTC
CGGCTCTTAAAGACGGCGGCCACCGCAGCCGAAGCGGTGGGGGTAGTGGC
GGGTGCGGTGTCGGGACGAACCAGGTCCATGCCACGGGCGGCGGCGGCGG
CGGCGGCGGCAACGGCGTTTCCGGCGGGAGACGGCGGTGGGTCAACAGCC
ATTGACGTCGGAGGGCCGTCGACGTCGTCGGCCGCTGCCCCCGCGACTCT
TGCCGGGGTAGCCGCTGCGCCCTCTGTTGCAGCTGCTGCTGCTGCTGCTG
CTGCTGCTCCTCCTGCAGTAGCACGTCCGGGAACAGCCGGTGTCGCGGTC
ACGACATCGGTGGCGGCAACTGCATTGGCACCACCGCCGTTGACAACAAC
AGTGGCAGCTACAACGGCAGCAACGTTGTCAACGCCAACGACAACAGCAG
TAGCGGCAGCAGCTCCTACGACAACGATAGCGGCGGCCGCAGCAACATCA
GCAGGGGGGGCTGGTCGTGGGCAGACTGGCAGAGTTACTGTCGGTGCCGG
CGTAAGTGCGATAAAGCGAGAGCTACAACCAGCGCCGCCAGCACCACTAC
CGGCGCCGGCAATAACAGCCCCGCTGTCAGCACCACCGACACCTCTGCCA
CAGGCGTCCGCCCCTATCGCCGTAGCCACTCCCGTTGCCACCGCGACTAC
CTACGCGCAGCCAGCACCGGGACCACCGGCGCCAACGACCAGTTCGGTAG
GGGGCATGACCGTTGCAGCTCAGCCCGCTCCTGCTGCCGCAGTTCTCGGG
ATGCTGGTTAAACCAGAGCCGGTCGCGAGCGGCGGCGGTGGGATGCCGAC
GACGGCGACGGCGGCGGCGGCGACGCTGCCCACTTTTTCAAACGGTACCA
GCCAGCAACAGCAGCAGCCGCGACCTATCGCCGTCGCTCCTACCCCGCAG
GCGACC back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig10313:2182..4937+ >mRNA_E-fasciculatus_F_contig10313.277.1 ID=mRNA_E-fasciculatus_F_contig10313.277.1|Name=mRNA_E-fasciculatus_F_contig10313.277.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1656bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10313:2182..4937+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCACGGGCGGCGGCGGCGGCGGCGGCGGCAACGGCGTTTCCGGCGGG
AGACGGCGGTGGGTCAACAGCCATTGACGTCGGAGGGCCGTCGACGTCGT
CGGCCGCTGCCCCCGCGACTCTTGCCGGGGTAGCCGCTGCGCCCTCTGTT
GCAGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTCCTGCAGTAGCACGTCC
GGGAACAGCCGGTGTCGCGGTCACGACATCGGTGGCGGCAACTGCATTGG
CACCACCGCCGTTGACAACAACAGTGGCAGCTACAACGGCAGCAACGTTG
TCAACGCCAACGACAACAGCAGTAGCGGCAGCAGCTCCTACGACAACGAT
AGCGGCGGCCGCAGCAACATCAGCAGGGGGGGCTGGTCGTGGGCAGACTG
GCAGAGTTACTGTCGGTGCCGGCGTAAGTGCGATAAAGCGAGAGCTACAA
CCAGCGCCGCCAGCACCACTACCGGCGCCGGCAATAACAGCCCCGCTGTC
AGCACCACCGACACCTCTGCCACAGGCGTCCGCCCCTATCGCCGTAGCCA
CTCCCGTTGCCACCGCGACTACCTACGCGCAGCCAGCACCGGGACCACCG
GCGCCAACGACCAGTTCGGTAGGGGGCATGACCGTTGCAGCTCAGCCCGC
TCCTGCTGCCGCAGTTCTCGGGATGCTGGTTAAACCAGAGCCGGTCGCGA
GCGGCGGCGGTGGGATGCCGACGACGGCGACGGCGGCGGCGGCGACGCTG
CCCACTTTTTCAAACGGTACCAGCCAGCAACAGCAGCAGCCGCGACCTAT
CGCCGTCGCTCCTACCCCGCAGGCGACCATGCCACGGGCGGCGGCGGCGG
CGGCGGCGGCAACGGCGTTTCCGGCGGGAGACGGCGGTGGGTCAACAGCC
ATTGACGTCGGAGGGCCGTCGACGTCGTCGGCCGCTGCCCCCGCGACTCT
TGCCGGGGTAGCCGCTGCGCCCTCTGTTGCAGCTGCTGCTGCTGCTGCTG
CTGCTGCTCCTCCTGCAGTAGCACGTCCGGGAACAGCCGGTGTCGCGGTC
ACGACATCGGTGGCGGCAACTGCATTGGCACCACCGCCGTTGACAACAAC
AGTGGCAGCTACAACGGCAGCAACGTTGTCAACGCCAACGACAACAGCAG
TAGCGGCAGCAGCTCCTACGACAACGATAGCGGCGGCCGCAGCAACATCA
GCAGGGGGGGCTGGTCGTGGGCAGACTGGCAGAGTTACTGTCGGTGCCGG
CGTAAGTGCGATAAAGCGAGAGCTACAACCAGCGCCGCCAGCACCACTAC
CGGCGCCGGCAATAACAGCCCCGCTGTCAGCACCACCGACACCTCTGCCA
CAGGCGTCCGCCCCTATCGCCGTAGCCACTCCCGTTGCCACCGCGACTAC
CTACGCGCAGCCAGCACCGGGACCACCGGCGCCAACGACCAGTTCGGTAG
GGGGCATGACCGTTGCAGCTCAGCCCGCTCCTGCTGCCGCAGTTCTCGGG
ATGCTGGTTAAACCAGAGCCGGTCGCGAGCGGCGGCGGTGGGATGCCGAC
GACGGCGACGGCGGCGGCGGCGACGCTGCCCACTTTTTCAAACGGTACCA
GCCAGCAACAGCAGCAGCCGCGACCTATCGCCGTCGCTCCTACCCCGCAG
GCGACC back to top
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