mRNA_E-fasciculatus_F_contig103.264.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig103.264.1
Unique NamemRNA_E-fasciculatus_F_contig103.264.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: A0A6H5LI82_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE)

HSP 1 Score: 615 bits (1587), Expect = 1.870e-215
Identity = 303/319 (94.98%), Postives = 313/319 (98.12%), Query Frame = 3
Query:  108 MASFFISCVVLATAVFCRYSAAEEVASGPELLSRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNE 1064
            MASFFISC+VLATAVFC  SAAEEVA GP + SRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNS+LTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLG+EWGATMCMGFVLFRATG+ VVGEFL+VMDALVHKNKDDQISVNLAA+NLGIVWDQESDMRYVESDSFGFGTIDTLVDE+N+PFSVTLLPH+AYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNE
Sbjct:    1 MASFFISCLVLATAVFCGRSAAEEVAHGPAV-SRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNE 318          
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 1.330e-96
Identity = 170/311 (54.66%), Postives = 203/311 (65.27%), Query Frame = 3
Query:  213 LPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQ-DVIMSDADALWLDDPFKD-FNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESNR----------------------------PFSVTLLPHSAYTRVCDETPISNKT-VVAHCWAP-KTADSKTGWMVQSKLW 1049
            LPAIT  ATC DW  WIPPRS PA+VMQVVS  Y+++ERNFIRLME NS  TR ++YLMCMD+ S +FF++ M IRC+P++A D P+H  IW LR RVVSCL+E G  DVIMSDADALWL DP KD F+        +VASRG +P     EWG+T+CMGF+LFRA     +  FLDVM  LV +NKDDQISVN AA+ LGIVWD+ SDMRY ES  +G G I  L   +N                             PF VTLLPHSAYTR+C    +SN+T VVAHC+ P K A  KT WM ++ LW
Sbjct:   27 LPAITKDATCVDWAAWIPPRSRPAVVMQVVSEGYIDIERNFIRLMERNSGFTRRNIYLMCMDDASKNFFDTKMGIRCVPMSALDLPTHEHIWQLRVRVVSCLLEIGNVDVIMSDADALWLADPAKDLFSRGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFRARNVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVWDKNSDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLW 337          
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: A0A6H5KMQ8_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 1.210e-74
Identity = 133/280 (47.50%), Postives = 176/280 (62.86%), Query Frame = 3
Query:  213 LPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFP-SHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLW 1049
            LP IT  ++C+D + W+PPRS PA+V QVVS  Y  LE NFI  MEL+S+ +R++LYL+C+D  SV  F+  + IRC+       P S  ++WVLR     CL+ AGQDV+MSDADA+WL DP  DF     +DS+VVASR   P PL  +WGAT+CMGF  FRA G  +   F+ V+  +V++  DDQ +VN A   LG+VWD  SDM +  S   G G I+ +    + P  VTLLPH+ YTR C  TPISN T+VAHC +    +    WM ++ LW
Sbjct:   61 LPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEANFISNMELHSTFSRENLYLVCLDEESVAIFDG-LGIRCVRYGCLGCPMSRLDVWVLRVEATLCLLNAGQDVLMSDADAIWLRDPTNDFASDLNMDSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGGSAMQA-FMTVVGEIVNELGDDQKAVNEALDKLGVVWDPTSDMDFTNSTRPGTGVIENITANGD-PLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLW 337          
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: D7FGV6_ECTSI (Acetyltransferase (Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 8.330e-72
Identity = 130/280 (46.43%), Postives = 176/280 (62.86%), Query Frame = 3
Query:  213 LPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFP-SHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLW 1049
            LP IT  ++C+D + W+PPRS PA+V QVVS  Y  LE NFI  MEL+S+ +R++LYL+C+D  SV  F+  + IRC+       P S  +IWVLR  V  CL+ AGQDV+MSDADA+WL DP  D      +DS+VVASR   P PL  +WGAT+CMGF  FRA G  +   F+ V++ + ++  +DQI+VN A   L +VWD  SDM + ++   G G I+ +  +      VTLLPH+ YTR C  TPISN T+VAHC +    +    WM ++ LW
Sbjct:  136 LPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEENFISNMELHSTFSRENLYLVCLDEESVAIFDG-LGIRCVRYGCLGCPVSRGDIWVLRIDVTICLLNAGQDVLMSDADAIWLRDPTDDLASDAFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGGSAMQA-FMTVVEEIANELGNDQIAVNEALNKLDVVWDPMSDMNFTDNTRPGTGVIENITVDGGS-LKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLW 412          
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: D8LSV3_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 4.890e-71
Identity = 127/278 (45.68%), Postives = 181/278 (65.11%), Query Frame = 3
Query:  219 AITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFP-SHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLW 1049
            AI+  A+CAD + W+PP+  PA+V QVVS+ Y+ +++NFI  MEL+S+ +R+++YL+C+D  SV  F  ++ IRC+       P S   +W LR  V  CL++AG DV+MSDADA+WL DP  DF+     DSS+VASRG  P PL   WGAT+CMGFVLFRA G   + +F++V+     + ++DQ +VNLA Q L +VWD  SDM + +S   G G ++++   S    +V+LLPH+ YTR C  TPIS +TVVAHC +    +    WM ++ LW
Sbjct:  121 AISRHASCADIVAWLPPQLQPAVVFQVVSKAYVSVQKNFISNMELHSTFSRENMYLICLDEESVESF-GALGIRCVRFGCMGCPVSRHHVWALRIEVSVCLLKAGIDVLMSDADAVWLHDPMDDFDSDDYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRA-GSNAIYQFMEVVGEFTEELENDQQAVNLALQKLDVVWDPTSDMSFSDSTRSGVGVVNSIY--SGESLTVSLLPHNKYTRSCRRTPISVETVVAHCISTDKGEGMATWMKEAHLW 394          
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: D7G4E2_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 5.420e-68
Identity = 120/197 (60.91%), Postives = 146/197 (74.11%), Query Frame = 3
Query:  486 WV--LRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGV-VGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQE-SDMRYVESDSFGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNE 1064
            WV  +    V   VEAG DV+MSDADALWL DP KDF+LP V+ SS+VASRG FP  +G  WGAT+CMGF+LFR T   V + EF+ VM+ALV + KDDQI+VN+AA++LGIVW+QE SDMRY ES  FG G ID+L D+ N+PF+VTLLPHSAYTR+C  TP+SN TVVAHC + KT  SK  WM +  LW  D +
Sbjct:   51 WVPPMSGPTVVMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDED 247          
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 6.950e-59
Identity = 100/148 (67.57%), Postives = 121/148 (81.76%), Query Frame = 3
Query:  345 MELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATG-KGVVGEFLDVMDALVHKNKDDQISV 785
            MEL +S TR+HLYLMC+D+ S+HFFES M I CIPL+  +  SH +IWVLR RVVSCL EAG DVIMSDADALWL DP KDF+LP VIDSS+VASRGK PK +G  WGATMCMGF+LFRAT  +  +G+F+ VM+ALV +++DDQI+V
Sbjct:    1 MELRTSFTRNHLYLMCLDDDSLHFFESFMGIHCIPLSGLNISSHEQIWVLRVRVVSCLAEAGHDVIMSDADALWLADPMKDFSLPGVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148          
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: A0A6H5JTX9_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 8.080e-55
Identity = 115/260 (44.23%), Postives = 146/260 (56.15%), Query Frame = 3
Query:  285 IVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQ-DVIMSDADALWLDDPFKD-FNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQ-----------------------------------------------------ISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESN 899
            + + VVS  Y+++ERNFIRLME NS  TR ++YLMCMD  S +FF++ M IRC+P++A D P+H +IW LR +VVSCL+E G  DVIMSDADALWL DP KD F+        ++ASRG +P     EWG+T+CMGF++FRA     +  FLDVM  LV +NKDDQ                                                     ISVN AA+ LGIVWD+ SDMRY ES  +G G I  L   +N
Sbjct:    1 MTVPVVSEGYIDIERNFIRLMERNSGFTRSNIYLMCMDGASKNFFDAKMGIRCVPMSALDLPTHQDIWQLRVKVVSCLLEVGHVDVIMSDADALWLADPAKDLFSRGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFRARNVAGMKRFLDVMADLVVQNKDDQMLCECATGVENDFCGFPASSRPRSNPTLTESAFCVAAPSPNASLILSIVSVEKISVNRAAKQLGIVWDKNSDMRYEESTGYGRGVIAGLGSSNN 260          
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: A0A8J6CCA2_DIALT (Nucleotid_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCA2_DIALT)

HSP 1 Score: 107 bits (266), Expect = 1.630e-21
Identity = 75/258 (29.07%), Postives = 126/258 (48.84%), Query Frame = 3
Query:  285 IVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTL-VDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAP-KTADSKTGWMVQSKLWF 1052
            +V+ V++  Y  +  NFIR    +  L     +++C D  +     + +  RC   T     S A+++  R   V+ LV  G+DV+++D DA+WL DP  D        + ++ SRG+ P    ++WGA++CMGF+ FR +   V       M  L    ++DQ   N   Q   +VWD E  +R+V+S    FGT+     +  +    V +LPH +Y R+C++    +  ++AHC +  K A  K   +    LW+
Sbjct:   50 VVVMVLNSAYTRVFENFIRAPGAHH-LAAWETHIICTDRATAVSL-AKLGWRCQD-TVKTGRSAAQVYTRRIPYVAHLVHLGRDVLITDVDAIWLGDPLPDI---MATQAGIIGSRGRSPH---LDWGASLCMGFIFFRGSDPLVRA----AMPVLTEPMREDQTDFNHNMQRERLVWD-EGRVRFVDSIDTSFGTLRPKNANAGHAGLRVAMLPHKSYVRICEDKVDYSTVIIAHCHSRGKRAHLKVQSLGAKNLWY 293          
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: A0A7S4TAX3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4TAX3_9DINO)

HSP 1 Score: 87.0 bits (214), Expect = 8.470e-15
Identity = 84/275 (30.55%), Postives = 127/275 (46.18%), Query Frame = 3
Query:  234 ATCADWMKWIPPRSDPAIVM-QVVSRHYLELERNFIRLM-ELNSSLTR--DHLYLMCMDNVSVHFFESSMN-IRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDF-NLPR-VIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVN--LAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKTADSKT-GW 1028
            A C D + W   R+   +V+  VVS  YL++ R ++R +  LN S  R   H+ ++C+D  +    E   +    +        +   +  +R RV + L E G DV+ +D DA+WL DP   F +L R      +V+SRG +P+ L   WGAT+C G + +        G F   +     +  DDQ  +N  LAAQ  G+ W     + Y  S       +  L  E      V LLPHS++ R+C +  +  + VV HC   K A  K  GW
Sbjct:   70 AECID-VSWFARRAVRGLVVFSVVSVDYLDVARAWLRRIGRLNISDLRVSKHVSMVCVDPAARAALERIGHPCHLLQPAGPSASAFGAVAFVRHRVAARLNERGLDVLYTDLDAIWLQDPLPTFRSLARQAAGPLLVSSRGSYPERLSELWGATLCTGVLFWHGR---FPGRFWAELAEAAGRATDDQAPLNELLAAQ--GLRWGPSPRLAYANSSRLDRARVPGLGLE------VALLPHSSFPRLCRDL-VEEEVVVLHCLRDKRAGRKALGW 331          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5LI82_9PHAE1.870e-21594.98Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D8LK17_ECTSI1.330e-9654.66Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A6H5KMQ8_9PHAE1.210e-7447.50Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D7FGV6_ECTSI8.330e-7246.43Acetyltransferase (Isoleucine patch superfamily pr... [more]
D8LSV3_ECTSI4.890e-7145.68Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D7G4E2_ECTSI5.420e-6860.91Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D7FQM0_ECTSI6.950e-5967.57Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A6H5JTX9_9PHAE8.080e-5544.23Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A8J6CCA2_DIALT1.630e-2129.07Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A7S4TAX3_9DINO8.470e-1530.55Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig103contigE-fasciculatus_F_contig103:9881..14028 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score618.2
Seed ortholog evalue2.1e-174
Seed eggNOG ortholog2880.D8LSV4
EggNOG free text desc.Nucleotide-diphospho-sugar transferase
EggNOG OGs2C6NG@1,2SGR5@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferase
Ec32 orthologEc-26_001560.1
Exons4
Model size2233
Cds size966
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig103.264.1prot_E-fasciculatus_F_contig103.264.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig103 9988..12868 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927530.222614-UTR-E-fasciculatus_F_contig103:9880..99871622927530.222614-UTR-E-fasciculatus_F_contig103:9880..9987Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig103 9881..9987 +
1695995580.6379547-UTR-E-fasciculatus_F_contig103:9880..99871695995580.6379547-UTR-E-fasciculatus_F_contig103:9880..9987Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig103 9881..9987 +
1622927530.3112197-UTR-E-fasciculatus_F_contig103:12868..140281622927530.3112197-UTR-E-fasciculatus_F_contig103:12868..14028Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig103 12869..14028 +
1695995580.7029808-UTR-E-fasciculatus_F_contig103:12868..140281695995580.7029808-UTR-E-fasciculatus_F_contig103:12868..14028Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig103 12869..14028 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927530.2704625-CDS-E-fasciculatus_F_contig103:9987..101761622927530.2704625-CDS-E-fasciculatus_F_contig103:9987..10176Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig103 9988..10176 +
1695995580.6527772-CDS-E-fasciculatus_F_contig103:9987..101761695995580.6527772-CDS-E-fasciculatus_F_contig103:9987..10176Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig103 9988..10176 +
1622927530.2811916-CDS-E-fasciculatus_F_contig103:11423..116451622927530.2811916-CDS-E-fasciculatus_F_contig103:11423..11645Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig103 11424..11645 +
1695995580.66351-CDS-E-fasciculatus_F_contig103:11423..116451695995580.66351-CDS-E-fasciculatus_F_contig103:11423..11645Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig103 11424..11645 +
1622927530.2907329-CDS-E-fasciculatus_F_contig103:12141..124051622927530.2907329-CDS-E-fasciculatus_F_contig103:12141..12405Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig103 12142..12405 +
1695995580.6737776-CDS-E-fasciculatus_F_contig103:12141..124051695995580.6737776-CDS-E-fasciculatus_F_contig103:12141..12405Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig103 12142..12405 +
1622927530.3014476-CDS-E-fasciculatus_F_contig103:12577..128681622927530.3014476-CDS-E-fasciculatus_F_contig103:12577..12868Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig103 12578..12868 +
1695995580.6897955-CDS-E-fasciculatus_F_contig103:12577..128681695995580.6897955-CDS-E-fasciculatus_F_contig103:12577..12868Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig103 12578..12868 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig103.264.1

>prot_E-fasciculatus_F_contig103.264.1 ID=prot_E-fasciculatus_F_contig103.264.1|Name=mRNA_E-fasciculatus_F_contig103.264.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=322bp
MASFFISCVVLATAVFCRYSAAEEVASGPELLSRRLPAITPKATCADWMK
WIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVS
VHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDAD
ALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRAT
GKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDS
FGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKT
ADSKTGWMVQSKLWFSDNEKL*
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mRNA from alignment at E-fasciculatus_F_contig103:9881..14028+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig103.264.1 ID=mRNA_E-fasciculatus_F_contig103.264.1|Name=mRNA_E-fasciculatus_F_contig103.264.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4148bp|location=Sequence derived from alignment at E-fasciculatus_F_contig103:9881..14028+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AACGATTTCCGAGCTCGAACACTGCGAGACCACGTACGATTTCCGAGCTC GAACACTGCGAGACCACGTACGGAGTACCCTGCTGTTGGTACGGTCTGCG CAGATCGATGGCGAGCTTCTTCATTTCGTGTGTGGTATTGGCCACTGCGG TGTTTTGCCGATACTCGGCGGCGGAGGAGGTGGCCTCTGGACCCGAGCTG CTGTCCAGACGGCTTCCGGCGATAACACCCAAGGCAACATGCGCTGACTG GATGAAGTGGATACCTCCTCGCTCGGATCCCGCTATCGTGATGCAGGTGC GTGTTCCCTTACTTAGCACCAGCAGCCAGCAGGCAACCCGTGTATCGGTC TTTAGTGTAGCGCCATTACGCCATCATCACCACAAGGCGCAGGTAGACGT GTGTTCTCACATCTATTGACTGTACCAAGGCGATGGTTCCGGGAAGCGGA CAGTCTCACCCTCGAAGATGTTTTGCTGCCCAATATGCGGACGCACCAGG CGAAAGACCACACGGAGTCAACGCCGTATGTACCGAAATGCCTGCCTGTT ACTGCCTTGTTGCCTTTTCCACAAGCCTTATCCGAAAACACAACCGACAG GCCCGGCACCTAATGCGCAGCCACCAAGTTTTGTGTGGTGCCGCTGTGCG GAGCAAATTGGTCATTTGGTTCTCAATTTTTCAATATATTCGTGACTTGA GAAAGGCCCCTTCGTTTGTGTGAGCTCCTGACGATTACATGCATAGACCC GTTGGACCTATAACGCACGTCGCGAGCAAACCAAGTGAGCCCACCGAGAC GACAACGTTGCACGAAAAACAAGAGACATCCCATCTCCTGTGATTGTATT TTGACACAGCGCGGAGCCTTCTTCTCCGGGTAGCTAGACGCTGTAGTAGC TCATTTGATCACCTACAGAACAACATTGATAAGACTTTGTAGATACGGCA GTGCAGGCAGTGTACCCATGGCGTCTGCTGCTGTACAGCAGTAGTTTCTA TTTCAAGCTGGTTGACAGTGAAAGTCTCCAGCTGTCTATGCATAACCGTC TGCTATCCTCGAGTGCCGAGAGGGCAATAGTTGTACCCGACCTGCCGCGA TTTTTTGCGGCGTGGGTACTACAGTATGTAGATATGTAAAGTTGTGGGAA AGTTGTATGTAGTCGTGATTGCCGGGGAACAGGGTCCCTCAGATATGCAA ATGTGTCTACAATCAGTGACGTGTATTTACACAAGTTGTCGCTGTGCTGT AGCGGGGGTTATACTTACAGCTTTCGTATTCCCTTCAAATACTTTGCTTC ACCTGACGGGAACGAATATATTGAATGCACAGACACGGTATGGTCGTATG ATGTAGTAGATCTATGTGTCTACACACGACGTGGAGTCTACAGCTTGACG TCATGTACATCGCACGTCTGGTGTGATGTGACCGTCGGGCGTCATGTATC TTGTGTACATGATTTCTGCTTACCGGCCGTCGCGCTTTGCCTTACTATAC GTTCCTGCCGCCCGACTGTTATCTCTCGTTTGCACCGTTTCAGGTTGTGA GCAGGCACTACTTGGAGTTGGAGCGAAATTTTATTCGGCTAATGGAGCTC AACTCGTCCTTGACCCGCGACCACCTATACCTCATGTGCATGGACAACGT GTCGGTGCACTTCTTCGAATCTTCCATGAACATCCGCTGCATCCCTCTCA CCGCTTTCGACTTCCCGTCCCATGCGGAGATCTGGGTATTGAGGGCCCGT GTGGTGTCCTGTCTGGTGAGCAGAGTGTGGGTGCACATGTCCCGCGGATG CATACAAGTTTTCAGTAACTGACTACTGTAATATCCTATTTGTCATTTGT TCTCTACCGTAGGCACTTTATTTGAATTGCGGTTCCACGCGTACAACATT GCGTAGGTACTGCTCTAGGTTCGCCACGCTTTTCTGCCCGCCTGAATGCG GGAGAAATGTTGTGTACTATGTACACTACTAGTTTCTCACCGTCTCATAT TCCTTCGAAAGCAAGACAACCTGTGGTCTACAGTTTGTTTTTCGTGTTGG AAAGACATTTCATGCGAATGGAAATAACCTGGGAAAGTGTTCCGTCATTG CCCGGAGGTTGTGCGTCACGCAACACCTGTCGAACTTTAGACTAGTTTTG CCACCCATGATGCCATGCCCATGGGTCTTCATCAAGAAGAGTGCGCGACG TATGCACGCCCTGATTGCAACATTTTCGCCCTCCTCTACCCTCCTCTACC CAACGGTGCAGGTGGAAGCGGGCCAAGATGTTATAATGTCCGATGCAGAT GCTCTATGGCTGGACGACCCGTTCAAGGACTTCAACCTTCCTCGCGTAAT CGACAGCAGCGTCGTCGCTTCTAGGGGGAAATTCCCCAAGCCGCTGGGAG TAGAATGGGGGGCAACCATGTGCATGGGTTTTGTTCTTTTCCGAGCGACT GGGAAAGGGGTCGTGGGAGAATTCCTCGACGTCATGGACGCCCTGGTTCA CAAGAACAAGGACGACCAGATCTCGGTGAGTGCATGGATTTTTCCATGGT GTGAACATGAATGAGGCGATTGTTACGGCCATCTGTATCTGTGGAACTTC GTCCCCCGACTGTGCAACTGCTATGAATCACACCCAGCTGTGCCATGGTG GCGATGTAATCAACGAGTCCTTCGCTGCCGACTGCACTCAAACTCAGGTT AATCTGGCGGCTCAAAACCTGGGGATAGTATGGGATCAGGAGAGCGACAT GCGCTACGTGGAGAGCGACTCCTTCGGCTTCGGGACCATTGACACTCTTG TGGATGAAAGCAACCGACCATTCTCTGTGACTTTACTGCCGCACAGCGCG TACACCCGCGTCTGCGACGAGACGCCAATTTCCAACAAAACTGTCGTGGC GCATTGTTGGGCGCCTAAGACAGCCGACAGCAAGACTGGTTGGATGGTGC AATCGAAGCTCTGGTTCAGTGACAATGAAAAACTCTGAGGCGAGGGCAGG GAGGAATCGTGGCAAACGCAAAGGGGCGGTGTCTGTCACCCCAGCACCCG CAGTGTAATCCGTGGGGAACGAACGTCCCCTAGTCGTTGAGAATCGGGAA CCCATGGCGTTTGCGCCGGAGTAGGCACCTCTCTGCAGCGCGTGCTGCTA TGCGTAGCTTTACACCGTGCATGATTGTGAACTTGTAGCAGACGTACCGC CTCCCGAAATTCGAAGCGCGTGGGAGTTCGGCGGTCTAAGACGATAGATG GTTCGGCGCAGCCGGAATTCTATCTGCTAGGCGTATCTACGGCATCTACA TTCCGAAATTCAGACTGCTTTGCCGTCATGTTGCAGAGAGCGTCTGAATG ATGACGGGTGTGTCGATATAAGGGTGTGGTAAACAACGGTAAAGTTAACG GCGCATAAGAACATGTTGCGCCCTCGTTGGTAAAAGTTTGTCGTCGCATG TAACCGAATCAAACTGGTCGTGAAGGGTAATGTGGTAAGTAACACTATTA TGGGCAAATTTTGGTATGTCTCTGCCTCCCGGACATTCAAGGATCTGGTG GGTGTAAGAATATTGGCGACGGCAGTCGCTTTCGTACGGTGCATTGCCGT ATCATGTGATGTTGCCCGATTCTTTACGACTGTTCTTGCGTCGCAGAGGG GCCGGTGCAATGCGAGTGAAGTCTGCAGAGTTCTCAGAGCGTTGGGCGAC ATGCTGGCCAAGCACTATGCTGAGGTCACAAAGCAAAGTGCCAAGTTTCT CCTTCATGAAATGGCCGTGGGGGTGGATCTGCCGACATCCAACAAACACC GGCCTTTTTCGCTCCGTGTCATTTTTTTTTCGGTGTTTCTTTGATTTTCC AGACGTGTCGTTTGTCGGATTCAGACATCTCACGGTTTTGGACGAATGTC GTGTATCTGCAGTGAGGGGGGTGAGAGAGAGTATTTTTCCGATCTGGAAA TATGTTTTTTGCTGTTGTTGTTGATGAGATATCGACCAAGAAGTCGATCT CGGAGACGAAGATTTCTGTGTTCTATGTGCGGTGATATCACGAGTAACAT ATTTTCCAAATTCGAGTGCGGCGAGTGCGGCGTCATTCCTATGAGCGCAT TGTTTGCCGCCCTGCTATGCATAATTTATGGTTGTTTTTTTGGTGAGG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig103:9881..14028+

>mRNA_E-fasciculatus_F_contig103.264.1 ID=mRNA_E-fasciculatus_F_contig103.264.1|Name=mRNA_E-fasciculatus_F_contig103.264.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1932bp|location=Sequence derived from alignment at E-fasciculatus_F_contig103:9881..14028+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCGAGCTTCTTCATTTCGTGTGTGGTATTGGCCACTGCGGTGTTTTG
CCGATACTCGGCGGCGGAGGAGGTGGCCTCTGGACCCGAGCTGCTGTCCA
GACGGCTTCCGGCGATAACACCCAAGGCAACATGCGCTGACTGGATGAAG
TGGATACCTCCTCGCTCGGATCCCGCTATCGTGATGCAGATGGCGAGCTT
CTTCATTTCGTGTGTGGTATTGGCCACTGCGGTGTTTTGCCGATACTCGG
CGGCGGAGGAGGTGGCCTCTGGACCCGAGCTGCTGTCCAGACGGCTTCCG
GCGATAACACCCAAGGCAACATGCGCTGACTGGATGAAGTGGATACCTCC
TCGCTCGGATCCCGCTATCGTGATGCAGGTTGTGAGCAGGCACTACTTGG
AGTTGGAGCGAAATTTTATTCGGCTAATGGAGCTCAACTCGTCCTTGACC
CGCGACCACCTATACCTCATGTGCATGGACAACGTGTCGGTGCACTTCTT
CGAATCTTCCATGAACATCCGCTGCATCCCTCTCACCGCTTTCGACTTCC
CGTCCCATGCGGAGATCTGGGTATTGAGGGCCCGTGTGGTGTCCTGTCTG
GTTGTGAGCAGGCACTACTTGGAGTTGGAGCGAAATTTTATTCGGCTAAT
GGAGCTCAACTCGTCCTTGACCCGCGACCACCTATACCTCATGTGCATGG
ACAACGTGTCGGTGCACTTCTTCGAATCTTCCATGAACATCCGCTGCATC
CCTCTCACCGCTTTCGACTTCCCGTCCCATGCGGAGATCTGGGTATTGAG
GGCCCGTGTGGTGTCCTGTCTGGTGGAAGCGGGCCAAGATGTTATAATGT
CCGATGCAGATGCTCTATGGCTGGACGACCCGTTCAAGGACTTCAACCTT
CCTCGCGTAATCGACAGCAGCGTCGTCGCTTCTAGGGGGAAATTCCCCAA
GCCGCTGGGAGTAGAATGGGGGGCAACCATGTGCATGGGTTTTGTTCTTT
TCCGAGCGACTGGGAAAGGGGTCGTGGGAGAATTCCTCGACGTCATGGAC
GCCCTGGTTCACAAGAACAAGGACGACCAGATCTCGGTGGAAGCGGGCCA
AGATGTTATAATGTCCGATGCAGATGCTCTATGGCTGGACGACCCGTTCA
AGGACTTCAACCTTCCTCGCGTAATCGACAGCAGCGTCGTCGCTTCTAGG
GGGAAATTCCCCAAGCCGCTGGGAGTAGAATGGGGGGCAACCATGTGCAT
GGGTTTTGTTCTTTTCCGAGCGACTGGGAAAGGGGTCGTGGGAGAATTCC
TCGACGTCATGGACGCCCTGGTTCACAAGAACAAGGACGACCAGATCTCG
GTTAATCTGGCGGCTCAAAACCTGGGGATAGTATGGGATCAGGAGAGCGA
CATGCGCTACGTGGAGAGCGACTCCTTCGGCTTCGGGACCATTGACACTC
TTGTGGATGAAAGCAACCGACCATTCTCTGTGACTTTACTGCCGCACAGC
GCGTACACCCGCGTCTGCGACGAGACGCCAATTTCCAACAAAACTGTCGT
GGCGCATTGTTGGGCGCCTAAGACAGCCGACAGCAAGACTGGTTGGATGG
TGCAATCGAAGCTCTGGTTCAGTGACAATGAAAAACTCTGAGTTAATCTG
GCGGCTCAAAACCTGGGGATAGTATGGGATCAGGAGAGCGACATGCGCTA
CGTGGAGAGCGACTCCTTCGGCTTCGGGACCATTGACACTCTTGTGGATG
AAAGCAACCGACCATTCTCTGTGACTTTACTGCCGCACAGCGCGTACACC
CGCGTCTGCGACGAGACGCCAATTTCCAACAAAACTGTCGTGGCGCATTG
TTGGGCGCCTAAGACAGCCGACAGCAAGACTGGTTGGATGGTGCAATCGA
AGCTCTGGTTCAGTGACAATGAAAAACTCTGA
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