mRNA_E-fasciculatus_F_contig103.264.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: A0A6H5LI82_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE) HSP 1 Score: 615 bits (1587), Expect = 1.870e-215 Identity = 303/319 (94.98%), Postives = 313/319 (98.12%), Query Frame = 3
Query: 108 MASFFISCVVLATAVFCRYSAAEEVASGPELLSRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNE 1064
MASFFISC+VLATAVFC SAAEEVA GP + SRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNS+LTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLG+EWGATMCMGFVLFRATG+ VVGEFL+VMDALVHKNKDDQISVNLAA+NLGIVWDQESDMRYVESDSFGFGTIDTLVDE+N+PFSVTLLPH+AYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNE
Sbjct: 1 MASFFISCLVLATAVFCGRSAAEEVAHGPAV-SRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNE 318
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI) HSP 1 Score: 312 bits (799), Expect = 1.330e-96 Identity = 170/311 (54.66%), Postives = 203/311 (65.27%), Query Frame = 3
Query: 213 LPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQ-DVIMSDADALWLDDPFKD-FNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESNR----------------------------PFSVTLLPHSAYTRVCDETPISNKT-VVAHCWAP-KTADSKTGWMVQSKLW 1049
LPAIT ATC DW WIPPRS PA+VMQVVS Y+++ERNFIRLME NS TR ++YLMCMD+ S +FF++ M IRC+P++A D P+H IW LR RVVSCL+E G DVIMSDADALWL DP KD F+ +VASRG +P EWG+T+CMGF+LFRA + FLDVM LV +NKDDQISVN AA+ LGIVWD+ SDMRY ES +G G I L +N PF VTLLPHSAYTR+C +SN+T VVAHC+ P K A KT WM ++ LW
Sbjct: 27 LPAITKDATCVDWAAWIPPRSRPAVVMQVVSEGYIDIERNFIRLMERNSGFTRRNIYLMCMDDASKNFFDTKMGIRCVPMSALDLPTHEHIWQLRVRVVSCLLEIGNVDVIMSDADALWLADPAKDLFSRGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFRARNVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVWDKNSDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLW 337
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: A0A6H5KMQ8_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE) HSP 1 Score: 254 bits (650), Expect = 1.210e-74 Identity = 133/280 (47.50%), Postives = 176/280 (62.86%), Query Frame = 3
Query: 213 LPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFP-SHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLW 1049
LP IT ++C+D + W+PPRS PA+V QVVS Y LE NFI MEL+S+ +R++LYL+C+D SV F+ + IRC+ P S ++WVLR CL+ AGQDV+MSDADA+WL DP DF +DS+VVASR P PL +WGAT+CMGF FRA G + F+ V+ +V++ DDQ +VN A LG+VWD SDM + S G G I+ + + P VTLLPH+ YTR C TPISN T+VAHC + + WM ++ LW
Sbjct: 61 LPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEANFISNMELHSTFSRENLYLVCLDEESVAIFDG-LGIRCVRYGCLGCPMSRLDVWVLRVEATLCLLNAGQDVLMSDADAIWLRDPTNDFASDLNMDSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGGSAMQA-FMTVVGEIVNELGDDQKAVNEALDKLGVVWDPTSDMDFTNSTRPGTGVIENITANGD-PLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLW 337
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: D7FGV6_ECTSI (Acetyltransferase (Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI) HSP 1 Score: 249 bits (637), Expect = 8.330e-72 Identity = 130/280 (46.43%), Postives = 176/280 (62.86%), Query Frame = 3
Query: 213 LPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFP-SHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLW 1049
LP IT ++C+D + W+PPRS PA+V QVVS Y LE NFI MEL+S+ +R++LYL+C+D SV F+ + IRC+ P S +IWVLR V CL+ AGQDV+MSDADA+WL DP D +DS+VVASR P PL +WGAT+CMGF FRA G + F+ V++ + ++ +DQI+VN A L +VWD SDM + ++ G G I+ + + VTLLPH+ YTR C TPISN T+VAHC + + WM ++ LW
Sbjct: 136 LPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEENFISNMELHSTFSRENLYLVCLDEESVAIFDG-LGIRCVRYGCLGCPVSRGDIWVLRIDVTICLLNAGQDVLMSDADAIWLRDPTDDLASDAFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGGSAMQA-FMTVVEEIANELGNDQIAVNEALNKLDVVWDPMSDMNFTDNTRPGTGVIENITVDGGS-LKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLW 412
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: D8LSV3_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI) HSP 1 Score: 247 bits (630), Expect = 4.890e-71 Identity = 127/278 (45.68%), Postives = 181/278 (65.11%), Query Frame = 3
Query: 219 AITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFP-SHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLW 1049
AI+ A+CAD + W+PP+ PA+V QVVS+ Y+ +++NFI MEL+S+ +R+++YL+C+D SV F ++ IRC+ P S +W LR V CL++AG DV+MSDADA+WL DP DF+ DSS+VASRG P PL WGAT+CMGFVLFRA G + +F++V+ + ++DQ +VNLA Q L +VWD SDM + +S G G ++++ S +V+LLPH+ YTR C TPIS +TVVAHC + + WM ++ LW
Sbjct: 121 AISRHASCADIVAWLPPQLQPAVVFQVVSKAYVSVQKNFISNMELHSTFSRENMYLICLDEESVESF-GALGIRCVRFGCMGCPVSRHHVWALRIEVSVCLLKAGIDVLMSDADAVWLHDPMDDFDSDDYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRA-GSNAIYQFMEVVGEFTEELENDQQAVNLALQKLDVVWDPTSDMSFSDSTRSGVGVVNSIY--SGESLTVSLLPHNKYTRSCRRTPISVETVVAHCISTDKGEGMATWMKEAHLW 394
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: D7G4E2_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI) HSP 1 Score: 233 bits (595), Expect = 5.420e-68 Identity = 120/197 (60.91%), Postives = 146/197 (74.11%), Query Frame = 3
Query: 486 WV--LRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGV-VGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQE-SDMRYVESDSFGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNE 1064
WV + V VEAG DV+MSDADALWL DP KDF+LP V+ SS+VASRG FP +G WGAT+CMGF+LFR T V + EF+ VM+ALV + KDDQI+VN+AA++LGIVW+QE SDMRY ES FG G ID+L D+ N+PF+VTLLPHSAYTR+C TP+SN TVVAHC + KT SK WM + LW D +
Sbjct: 51 WVPPMSGPTVVMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDED 247
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI) HSP 1 Score: 206 bits (523), Expect = 6.950e-59 Identity = 100/148 (67.57%), Postives = 121/148 (81.76%), Query Frame = 3
Query: 345 MELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATG-KGVVGEFLDVMDALVHKNKDDQISV 785
MEL +S TR+HLYLMC+D+ S+HFFES M I CIPL+ + SH +IWVLR RVVSCL EAG DVIMSDADALWL DP KDF+LP VIDSS+VASRGK PK +G WGATMCMGF+LFRAT + +G+F+ VM+ALV +++DDQI+V
Sbjct: 1 MELRTSFTRNHLYLMCLDDDSLHFFESFMGIHCIPLSGLNISSHEQIWVLRVRVVSCLAEAGHDVIMSDADALWLADPMKDFSLPGVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: A0A6H5JTX9_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE) HSP 1 Score: 201 bits (512), Expect = 8.080e-55 Identity = 115/260 (44.23%), Postives = 146/260 (56.15%), Query Frame = 3
Query: 285 IVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQ-DVIMSDADALWLDDPFKD-FNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQ-----------------------------------------------------ISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESN 899
+ + VVS Y+++ERNFIRLME NS TR ++YLMCMD S +FF++ M IRC+P++A D P+H +IW LR +VVSCL+E G DVIMSDADALWL DP KD F+ ++ASRG +P EWG+T+CMGF++FRA + FLDVM LV +NKDDQ ISVN AA+ LGIVWD+ SDMRY ES +G G I L +N
Sbjct: 1 MTVPVVSEGYIDIERNFIRLMERNSGFTRSNIYLMCMDGASKNFFDAKMGIRCVPMSALDLPTHQDIWQLRVKVVSCLLEVGHVDVIMSDADALWLADPAKDLFSRGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFRARNVAGMKRFLDVMADLVVQNKDDQMLCECATGVENDFCGFPASSRPRSNPTLTESAFCVAAPSPNASLILSIVSVEKISVNRAAKQLGIVWDKNSDMRYEESTGYGRGVIAGLGSSNN 260
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: A0A8J6CCA2_DIALT (Nucleotid_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCA2_DIALT) HSP 1 Score: 107 bits (266), Expect = 1.630e-21 Identity = 75/258 (29.07%), Postives = 126/258 (48.84%), Query Frame = 3
Query: 285 IVMQVVSRHYLELERNFIRLMELNSSLTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVNLAAQNLGIVWDQESDMRYVESDSFGFGTIDTL-VDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAP-KTADSKTGWMVQSKLWF 1052
+V+ V++ Y + NFIR + L +++C D + + + RC T S A+++ R V+ LV G+DV+++D DA+WL DP D + ++ SRG+ P ++WGA++CMGF+ FR + V M L ++DQ N Q +VWD E +R+V+S FGT+ + + V +LPH +Y R+C++ + ++AHC + K A K + LW+
Sbjct: 50 VVVMVLNSAYTRVFENFIRAPGAHH-LAAWETHIICTDRATAVSL-AKLGWRCQD-TVKTGRSAAQVYTRRIPYVAHLVHLGRDVLITDVDAIWLGDPLPDI---MATQAGIIGSRGRSPH---LDWGASLCMGFIFFRGSDPLVRA----AMPVLTEPMREDQTDFNHNMQRERLVWD-EGRVRFVDSIDTSFGTLRPKNANAGHAGLRVAMLPHKSYVRICEDKVDYSTVIIAHCHSRGKRAHLKVQSLGAKNLWY 293
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Match: A0A7S4TAX3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4TAX3_9DINO) HSP 1 Score: 87.0 bits (214), Expect = 8.470e-15 Identity = 84/275 (30.55%), Postives = 127/275 (46.18%), Query Frame = 3
Query: 234 ATCADWMKWIPPRSDPAIVM-QVVSRHYLELERNFIRLM-ELNSSLTR--DHLYLMCMDNVSVHFFESSMN-IRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDF-NLPR-VIDSSVVASRGKFPKPLGVEWGATMCMGFVLFRATGKGVVGEFLDVMDALVHKNKDDQISVN--LAAQNLGIVWDQESDMRYVESDSFGFGTIDTLVDESNRPFSVTLLPHSAYTRVCDETPISNKTVVAHCWAPKTADSKT-GW 1028
A C D + W R+ +V+ VVS YL++ R ++R + LN S R H+ ++C+D + E + + + + +R RV + L E G DV+ +D DA+WL DP F +L R +V+SRG +P+ L WGAT+C G + + G F + + DDQ +N LAAQ G+ W + Y S + L E V LLPHS++ R+C + + + VV HC K A K GW
Sbjct: 70 AECID-VSWFARRAVRGLVVFSVVSVDYLDVARAWLRRIGRLNISDLRVSKHVSMVCVDPAARAALERIGHPCHLLQPAGPSASAFGAVAFVRHRVAARLNERGLDVLYTDLDAIWLQDPLPTFRSLARQAAGPLLVSSRGSYPERLSELWGATLCTGVLFWHGR---FPGRFWAELAEAAGRATDDQAPLNELLAAQ--GLRWGPSPRLAYANSSRLDRARVPGLGLE------VALLPHSSFPRLCRDL-VEEEVVVLHCLRDKRAGRKALGW 331 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig103.264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig103.264.1 >prot_E-fasciculatus_F_contig103.264.1 ID=prot_E-fasciculatus_F_contig103.264.1|Name=mRNA_E-fasciculatus_F_contig103.264.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=322bp MASFFISCVVLATAVFCRYSAAEEVASGPELLSRRLPAITPKATCADWMKback to top mRNA from alignment at E-fasciculatus_F_contig103:9881..14028+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig103.264.1 ID=mRNA_E-fasciculatus_F_contig103.264.1|Name=mRNA_E-fasciculatus_F_contig103.264.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4148bp|location=Sequence derived from alignment at E-fasciculatus_F_contig103:9881..14028+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig103:9881..14028+ >mRNA_E-fasciculatus_F_contig103.264.1 ID=mRNA_E-fasciculatus_F_contig103.264.1|Name=mRNA_E-fasciculatus_F_contig103.264.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1932bp|location=Sequence derived from alignment at E-fasciculatus_F_contig103:9881..14028+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |