mRNA_E-fasciculatus_F_contig1024.225.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1024.225.1 vs. uniprot
Match: A0A6H5JD74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD74_9PHAE) HSP 1 Score: 281 bits (720), Expect = 7.110e-94 Identity = 137/154 (88.96%), Postives = 144/154 (93.51%), Query Frame = 2
Query: 2 VDGYMSGGVSVDHEGLAFTAVDLYLWARGLSSESLSDGAGQRPRYSLRTLVGAVSCARRLVDRGFSPKRAMVEGYRSLFETQLDGDGRAKILKGILRAFGKGMTAKDLEKPPRRPGGRGSSNSAWVRIGPFWLEGGPVEPVDAAELDPTTKQRR 463
VDGY+S GVSVDHE LAFTAVDLYLWAR LSSESLSDGAGQRPRYSLRTLVGAVSCARRLV RGFSPKRAM+EG+RSLFETQLDGDGRAKILKGILRAFGKGM AKDLEKPPRRPGGR SSN++WVRIGPFWLEGGP +P+D AELDP T QRR
Sbjct: 120 VDGYISSGVSVDHESLAFTAVDLYLWARVLSSESLSDGAGQRPRYSLRTLVGAVSCARRLVQRGFSPKRAMLEGFRSLFETQLDGDGRAKILKGILRAFGKGMGAKDLEKPPRRPGGRASSNASWVRIGPFWLEGGPHDPIDEAELDPETNQRR 273
BLAST of mRNA_E-fasciculatus_F_contig1024.225.1 vs. uniprot
Match: D7FL28_ECTSI (Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL28_ECTSI) HSP 1 Score: 290 bits (741), Expect = 7.470e-88 Identity = 141/154 (91.56%), Postives = 148/154 (96.10%), Query Frame = 2
Query: 2 VDGYMSGGVSVDHEGLAFTAVDLYLWARGLSSESLSDGAGQRPRYSLRTLVGAVSCARRLVDRGFSPKRAMVEGYRSLFETQLDGDGRAKILKGILRAFGKGMTAKDLEKPPRRPGGRGSSNSAWVRIGPFWLEGGPVEPVDAAELDPTTKQRR 463
VDGY+S GVSVDH+GLAFTAVDLYLWARGLS+ESLSDGAGQRPRYSLRTLVGAVSCARRLVDRGFS KRAMVEGYRSLFETQLDGDGRAKILKGILRAFGKGM+AKDLEKPPRRPGGR SS++ WVRIGPFWLEGGP +PVDAAELDPTT QRR
Sbjct: 178 VDGYISDGVSVDHDGLAFTAVDLYLWARGLSTESLSDGAGQRPRYSLRTLVGAVSCARRLVDRGFSAKRAMVEGYRSLFETQLDGDGRAKILKGILRAFGKGMSAKDLEKPPRRPGGRASSSAPWVRIGPFWLEGGPHDPVDAAELDPTTNQRR 331
BLAST of mRNA_E-fasciculatus_F_contig1024.225.1 vs. uniprot
Match: A0A7S4N8L4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8L4_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.860e-28 Identity = 62/138 (44.93%), Postives = 91/138 (65.94%), Query Frame = 2
Query: 23 GVSVDHEGLAFTAVDLYLWARGLSSESLSDGAGQRPRYSLRTLVGAVSCARRLV-DRGFSPKRAMVEGYRSLFETQLDGDGRAKILKGILRAFGKGMTAKDLEKPPRRPGGRGSSNSAWVRIGPFWLEGGPVEPVDAA 433
G S++ T+VD+YL R L++ SL+DG+GQRPRY+LRTL A+S AR LV + + +RA++EG+ FE LD R + K + A G+G++AK+L+ P RRPGGRG+ +V + PFW++GG + VD A
Sbjct: 114 GASLESSDAVLTSVDVYLKCRSLANRSLADGSGQRPRYTLRTLCRALSAARTLVRTQKWKLRRALLEGFELAFEGPLDDSSRGTLRKVLRGALGEGLSAKELDHPGRRPGGRGADGE-YVLVRPFWIKGGQEDRVDWA 250
BLAST of mRNA_E-fasciculatus_F_contig1024.225.1 vs. uniprot
Match: A0A7S1YT04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YT04_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.040e-27 Identity = 64/147 (43.54%), Postives = 90/147 (61.22%), Query Frame = 2
Query: 11 YMSGGVSVDHEGLA-----FTAVDLYLWARGLSSESLSDGAGQRPRYSLRTLVGAVSCARRLV-DRGFSPKRAMVEGYRSLFETQLDGDGRAKILKGILRAFGKGMTAKDLEKPPRRPGGRGSSNSAWVRIGPFWLEGGPVEPVDAA 433
Y+SG + L TAVD+YL R LS +SL DG GQ+PRY++RT+ A+S R LV ++ FSP RA++EG+ FE LD RA + K + ++ GK ++ KDL+ P RRPGG+ S +V PFW++ GP+ VD A
Sbjct: 463 YLSGAIETSSGNLEQNHTIMTAVDVYLNCRQLSEQSLVDGGGQKPRYTMRTMCRALSAGRNLVLEQRFSPTRAILEGFELSFEGPLDMTSRAALQKMLFKSLGKSLSKKDLDHPARRPGGKSDS---FVLCKPFWIKAGPLPQVDWA 606
BLAST of mRNA_E-fasciculatus_F_contig1024.225.1 vs. uniprot
Match: K0TEP4_THAOC (Midasin n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEP4_THAOC) HSP 1 Score: 113 bits (282), Expect = 4.400e-26 Identity = 62/152 (40.79%), Postives = 91/152 (59.87%), Query Frame = 2
Query: 14 MSGGVSVDHEGLAFTAVDLYLWARGLSSESLSDGAGQRPRYSLRTLVGAVSCARRLV-DRGFSPKRAMVEGYRSLFETQLDGDGRAKILKGILRAFGKGMTAKDLEKPPRRPGGRGSSNSAWVRIGPFWLEGGPVEPVD--AAELDPTTKQR 460
++ GV ++H ++VDLYL R LS +SL+DG GQ+PRY+LRTL ++ AR L+ + F+P+RA++EG+ FE LD RA I K KG + KD + P RRP GR N+ +V + PFW++ G + +D A L P K +
Sbjct: 1145 VTSGVPLEHTESVLSSVDLYLKCRSLSDQSLADGGGQKPRYTLRTLTRTLTSARNLILQQKFAPQRAILEGFELAFEASLDLPSRAIIQKQFKSLLPKGTSHKDRDHPGRRPDGRSGGNT-FVLVKPFWIKSGEEKQIDWTDASLSPDGKPK 1295
BLAST of mRNA_E-fasciculatus_F_contig1024.225.1 vs. uniprot
Match: A0A1Z5KFH3_FISSO (Midasin n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFH3_FISSO) HSP 1 Score: 104 bits (260), Expect = 3.990e-23 Identity = 56/131 (42.75%), Postives = 79/131 (60.31%), Query Frame = 2
Query: 38 HEGLAFTAVDLYLWARGLSSESLSDGAGQRPRYSLRTLVGAVSCARRLV-DRGFSPKRAMVEGYRSLFETQLDGDGRAKILKGILRAFGKGMTAKDLEKPPRRPGGRGSSNSAWVRIGPFWLEGGPVEPVD 427
H VD YL R LS SL+DG GQRPRY+LR+L A+S A+ LV + S +RA+VEG+ F LD + K I+ GKG+ +K+++ P RRP G + S ++ I PFW+E GP++P+D
Sbjct: 956 HVESVIACVDTYLECRALSQTSLADGNGQRPRYTLRSLTRALSAAKSLVLKQHLSLQRALVEGFTLAFRGVLDEKSSKIVKKAIMSNLGKGLGSKEMQHPGRRPSG--NEGSEYLLIKPFWIEKGPLDPID 1084
BLAST of mRNA_E-fasciculatus_F_contig1024.225.1 vs. uniprot
Match: A0A024G2I3_9STRA (Midasin n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2I3_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.160e-21 Identity = 58/144 (40.28%), Postives = 81/144 (56.25%), Query Frame = 2
Query: 35 DHEGLAFTAVDLYLWARGLSSESLSDGAGQRPRYSLRTLVGAVSCARRLVDRGFSPKRAMVEGYRSLFETQLDGDGRAKILKGILRAFGKGMTAKDLEKPPRRPGGRGSSNSAWVRIGPFWL-EGGPVEPVDAAELDPTTKQRR 463
D++ L+ T V YL + L+ LSDGA Q+PRYSLRTL A+ A LV RG+ R + E + S F T LD D R I + I F K + K+L + P RPGGR S + +V + +W+ + EP D + DP T Q++
Sbjct: 990 DNKSLSQTIVSFYLETKQLADTRLSDGANQKPRYSLRTLCRALYIANILVQRGYGIPRTLYEAFSSTFCTLLDHDSRTFIEQKIRSTFAKQLKPKELSRAPPRPGGRQSQHE-YVLVQSYWIPKASYCEPNDWSVADPLTNQKQ 1132
BLAST of mRNA_E-fasciculatus_F_contig1024.225.1 vs. uniprot
Match: A0A484E3U5_BRELC (VWFA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3U5_BRELC) HSP 1 Score: 97.1 bits (240), Expect = 1.960e-20 Identity = 57/135 (42.22%), Postives = 77/135 (57.04%), Query Frame = 2
Query: 62 VDLYLWARGLSSESLSDGAGQRPRYSLRTLVGAVSCARRLVDRGFSPKRAMVEGYRSLFETQLDGDGRAKILKGILRAFGKGMTAKDLEKPPRRPGGRGSSNSAWVRIGPFWLEGGPVE-PVDAAELDPTTKQRR 463
V YL AR L+ LSDGA Q+PRYSLRTL A+ R L+ RG+ RAM EG+ S F TQL+ + R + + I F K M K+L++ P PGG N+ +V + +WL G P D + DP T +R+
Sbjct: 988 VQFYLEARKLAEVRLSDGARQKPRYSLRTLCQALHITRILIQRGYGTSRAMFEGFCSSFCTQLETESRQCLERLIKNTFAKTMKDKELKRSPPCPGGP-KKNNEYVLVSSYWLHKGSFHAPRDDSLPDPKTSRRK 1121
BLAST of mRNA_E-fasciculatus_F_contig1024.225.1 vs. uniprot
Match: F0WDW5_9STRA (Midasin n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDW5_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 9.180e-20 Identity = 54/144 (37.50%), Postives = 79/144 (54.86%), Query Frame = 2
Query: 35 DHEGLAFTAVDLYLWARGLSSESLSDGAGQRPRYSLRTLVGAVSCARRLVDRGFSPKRAMVEGYRSLFETQLDGDGRAKILKGILRAFGKGMTAKDLEKPPRRPGGRGSSNSAWVRIGPFWL-EGGPVEPVDAAELDPTTKQRR 463
D++ ++ T V YL + L+ LSDGA Q+P YSLRTL A+ A LV RG+ R + E + S F T LD D R I + I F + + K+L + P RPGGR + +V + +W+ + EP D + DP T Q++
Sbjct: 994 DNQSISQTIVSFYLETKQLADTKLSDGANQKPHYSLRTLCRALYIANILVQRGYGIPRTLYEAFSSTFCTLLDHDSRTLIDRKIRSTFARQLKPKELSRAPPRPGGR-QAEQQYVLVQSYWIPKASYCEPNDWSMSDPMTNQKQ 1136
BLAST of mRNA_E-fasciculatus_F_contig1024.225.1 vs. uniprot
Match: A0A4D9D334_9STRA (VWFA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D334_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 9.520e-18 Identity = 57/133 (42.86%), Postives = 75/133 (56.39%), Query Frame = 2
Query: 62 VDLYLWARGLSSESLSDGAGQRPRYSLRTLVGAVSCARRLV--DRGFSPKRAMVEGYRSLFETQLDGDGRAKILKGILRAFGK-----------GMTAKDLEKPPRRPGGRGSSNS-AWVRI-GPFWLEGGPV 415
V LYL R L+ L DGAGQRPRYSLRTL A++ AR L + +P RA++EG+ FETQL R + K +L A + G+ K+L++P R P SS S +WV + GPFWL GP+
Sbjct: 1001 VQLYLRCRQLAESVLVDGAGQRPRYSLRTLTRALAAARALTAAPQLLTPVRALLEGFALAFETQLQDASRPLLRKELLAALTRASGASSRKTPPGLAEKELDQPARPPPSPDSSVSPSWVLVSGPFWLPTGPL 1133 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1024.225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1024.225.1 >prot_E-fasciculatus_F_contig1024.225.1 ID=prot_E-fasciculatus_F_contig1024.225.1|Name=mRNA_E-fasciculatus_F_contig1024.225.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=151bp MSGGVSVDHEGLAFTAVDLYLWARGLSSESLSDGAGQRPRYSLRTLVGAVback to top mRNA from alignment at E-fasciculatus_F_contig1024:14234..15524- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1024.225.1 ID=mRNA_E-fasciculatus_F_contig1024.225.1|Name=mRNA_E-fasciculatus_F_contig1024.225.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1291bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1024:14234..15524- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1024:14234..15524- >mRNA_E-fasciculatus_F_contig1024.225.1 ID=mRNA_E-fasciculatus_F_contig1024.225.1|Name=mRNA_E-fasciculatus_F_contig1024.225.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=906bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1024:14234..15524- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |