mRNA_E-fasciculatus_F_contig10214.205.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10214.205.1 vs. uniprot
Match: D7FHE4_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE4_ECTSI) HSP 1 Score: 138 bits (348), Expect = 3.250e-40 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 Query: 4 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 195 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL Sbjct: 117 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 180
BLAST of mRNA_E-fasciculatus_F_contig10214.205.1 vs. uniprot
Match: A0A6H5KR31_9PHAE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR31_9PHAE) HSP 1 Score: 138 bits (348), Expect = 1.290e-39 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 Query: 4 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 195 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL Sbjct: 166 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 229
BLAST of mRNA_E-fasciculatus_F_contig10214.205.1 vs. uniprot
Match: A0A099P2W3_PICKU (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pichia TaxID=4919 RepID=A0A099P2W3_PICKU) HSP 1 Score: 113 bits (282), Expect = 1.960e-30 Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 1 Query: 4 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 195 ANAGPNTNGSQFF+ TV CPWLDGKHVVFG V DG+DVVKK+E+LGSPSG+T+ + I DCGEL Sbjct: 98 ANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDVVKKVESLGSPSGQTRAEIKITDCGEL 161
BLAST of mRNA_E-fasciculatus_F_contig10214.205.1 vs. uniprot
Match: A0A7S2UZ03_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ03_9STRA) HSP 1 Score: 112 bits (279), Expect = 2.610e-30 Identity = 49/64 (76.56%), Postives = 55/64 (85.94%), Query Frame = 1 Query: 4 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 195 ANAGPNTNGSQFF+CTVD PWLDGKH VFGSVV+GMDVVK +E +GS SGKT V +KDCG+L Sbjct: 71 ANAGPNTNGSQFFICTVDTPWLDGKHTVFGSVVEGMDVVKSIEGVGSGSGKTSKKVIVKDCGQL 134
BLAST of mRNA_E-fasciculatus_F_contig10214.205.1 vs. uniprot
Match: A0A7S4SVH3_9DINO (Peptidyl-prolyl cis-trans isomerase n=5 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SVH3_9DINO) HSP 1 Score: 111 bits (277), Expect = 2.700e-30 Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 1 Query: 4 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 195 ANAGPNTNGSQFFLCTV WLDGKHVVFGSV DGMDVVKK+EA+GS +GKT AV I DCG+L Sbjct: 46 ANAGPNTNGSQFFLCTVKTGWLDGKHVVFGSVTDGMDVVKKIEAVGSQAGKTSKAVVIADCGQL 109
BLAST of mRNA_E-fasciculatus_F_contig10214.205.1 vs. uniprot
Match: A0A7S1D0F5_CYCTE (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0F5_CYCTE) HSP 1 Score: 114 bits (285), Expect = 2.870e-30 Identity = 49/64 (76.56%), Postives = 57/64 (89.06%), Query Frame = 1 Query: 4 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 195 ANAGPNTNGSQFF+CTVD PWLDGKHVVFGSVVDG+DVV+K+E+ GSP+G T + IKDCGE+ Sbjct: 150 ANAGPNTNGSQFFICTVDTPWLDGKHVVFGSVVDGIDVVEKVESYGSPNGATSKTIVIKDCGEI 213
BLAST of mRNA_E-fasciculatus_F_contig10214.205.1 vs. uniprot
Match: F6KMJ0_EPICO (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Epinephelus coioides TaxID=94232 RepID=F6KMJ0_EPICO) HSP 1 Score: 110 bits (275), Expect = 4.190e-30 Identity = 49/64 (76.56%), Postives = 55/64 (85.94%), Query Frame = 1 Query: 4 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 195 ANAGPNTNGSQFF+CT WLDGKHVVFGSVV+GMDVVKK+EA+GS SGKT T + I DCG+L Sbjct: 39 ANAGPNTNGSQFFICTAKTSWLDGKHVVFGSVVEGMDVVKKMEAVGSQSGKTSTKIAIADCGQL 102
BLAST of mRNA_E-fasciculatus_F_contig10214.205.1 vs. uniprot
Match: A0A401PWD0_SCYTO (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401PWD0_SCYTO) HSP 1 Score: 109 bits (273), Expect = 4.500e-30 Identity = 49/64 (76.56%), Postives = 55/64 (85.94%), Query Frame = 1 Query: 4 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 195 ANAGPNTNGSQFFLCTV+ WLDGKHVVFGSV DGMDVVK++E LGS +GKT +TI DCG+L Sbjct: 16 ANAGPNTNGSQFFLCTVNTAWLDGKHVVFGSVTDGMDVVKEMENLGSENGKTSKKITISDCGQL 79
BLAST of mRNA_E-fasciculatus_F_contig10214.205.1 vs. uniprot
Match: A0A7S1DY42_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1DY42_9STRA) HSP 1 Score: 112 bits (281), Expect = 9.640e-30 Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 1 Query: 4 ANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 195 ANAGPNTNGSQFF+CT+D PWLD KHVVFG VVDG+DVV K+E++GS SG T AVT+KDCGEL Sbjct: 145 ANAGPNTNGSQFFICTIDTPWLDDKHVVFGKVVDGLDVVDKIESVGSQSGATSQAVTVKDCGEL 208
BLAST of mRNA_E-fasciculatus_F_contig10214.205.1 vs. uniprot
Match: A0A2A2M309_9BILA (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2M309_9BILA) HSP 1 Score: 108 bits (270), Expect = 1.030e-29 Identity = 48/65 (73.85%), Postives = 56/65 (86.15%), Query Frame = 1 Query: 1 KANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 195 +ANAGP TNGSQFF+CTVD PWLD KHVVFG VVDGMDVV+K+E++GS SGK + VTI DCGE+ Sbjct: 5 QANAGPGTNGSQFFICTVDTPWLDDKHVVFGHVVDGMDVVRKVESMGSRSGKPQKKVTIADCGEI 69 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10214.205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10214.205.1 >prot_E-fasciculatus_F_contig10214.205.1 ID=prot_E-fasciculatus_F_contig10214.205.1|Name=mRNA_E-fasciculatus_F_contig10214.205.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=66bp KANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSback to top mRNA from alignment at E-fasciculatus_F_contig10214:89..488+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10214.205.1 ID=mRNA_E-fasciculatus_F_contig10214.205.1|Name=mRNA_E-fasciculatus_F_contig10214.205.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=400bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10214:89..488+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10214:89..488+ >mRNA_E-fasciculatus_F_contig10214.205.1 ID=mRNA_E-fasciculatus_F_contig10214.205.1|Name=mRNA_E-fasciculatus_F_contig10214.205.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=396bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10214:89..488+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |