mRNA_E-fasciculatus_F_contig102.191.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig102.191.1 vs. uniprot
Match: A0A6H5JLI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLI2_9PHAE) HSP 1 Score: 448 bits (1153), Expect = 9.020e-142 Identity = 234/278 (84.17%), Postives = 248/278 (89.21%), Query Frame = 3 Query: 660 SAIRDV-WPRIVPGLQHLCRVECLCCRFCRCFSRVREKVVAAAKGEGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGGIPIGKACRYTYCLREPTRKGLYLLPTPLEKPANSCFVCNTSSLDLYLDTETLTLADLVDRVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDTSVEVEDFSQDLTVKLNIFHKTFDEEEVPEGFTISGDAKARPAADTDAAKP 1490 SA+R+ W R V R C R +REKV+AAAKG+GDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQS YEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGG+PIG+ACRYTYCLREPTRKGLYLLPTPLEKPA SCFVCNTS+L+L LDTETLTLA+LVDRVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDT+VEVEDFSQDLTVKLNIFHKTF+EEEVPEGFT+SG+AKARP AD D KP Sbjct: 309 SALRERGWDRKVWDEADSARELARCVRHIYHKEDLREKVMAAAKGQGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSLYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGGVPIGEACRYTYCLREPTRKGLYLLPTPLEKPAKSCFVCNTSTLELCLDTETLTLANLVDRVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDTTVEVEDFSQDLTVKLNIFHKTFNEEEVPEGFTLSGEAKARPTADADVVKP 586
BLAST of mRNA_E-fasciculatus_F_contig102.191.1 vs. uniprot
Match: D7FHM8_ECTSI (Putative ubiquitin activating enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM8_ECTSI) HSP 1 Score: 413 bits (1061), Expect = 5.680e-134 Identity = 213/237 (89.87%), Postives = 222/237 (93.67%), Query Frame = 3 Query: 759 VREKVVAAAKGEGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGGIPIGKACRYTYCLREPTRKGLYLLPTPLEKPANSCFVCNTSSLDLYLDTETLTLADLVDRVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDTSVEVEDFSQDLTVKLNIFHKTFDEEEVP--EGFTISGDAKARP 1463 +REKV+AAAKGEGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGG+ IG+ACRYTYCLREPTRKGLYLLPTPLEKPA SCFVCNTS+L+L LDTETLTLADLV+RVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDT+VEVEDFSQDLTVKLNIFHKTFDEEE +G GD P Sbjct: 43 LREKVMAAAKGEGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGGVAIGEACRYTYCLREPTRKGLYLLPTPLEKPAKSCFVCNTSTLELCLDTETLTLADLVERVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDTAVEVEDFSQDLTVKLNIFHKTFDEEEERGRQGRVTDGDRNQSP 279
BLAST of mRNA_E-fasciculatus_F_contig102.191.1 vs. uniprot
Match: A0A835ZFD7_9STRA (SUMO-activating enzyme subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFD7_9STRA) HSP 1 Score: 280 bits (715), Expect = 4.660e-79 Identity = 148/272 (54.41%), Postives = 184/272 (67.65%), Query Frame = 3 Query: 678 WPRIVPGLQHLCRVECLCCRFCRCFSRVREKVVAAAKGEGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGGIPIGKACRYTYCLREPTRKGLYLLPTPLEKPANSCFVCNTSSLDLYLDTETLTLADLVDRVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDTSVEVEDFSQDLTVKLNIFHKTFDEEEVPEGFTISGDAKARPAADTDAAKPS 1493 W R V G++ R F C V AA + ++FDKDD+IAM FV AA NLRS VF IP+QS ++AKG+AGNII AIATTNAIIAGLQV+EALKI++ PI +AC Y +CLRE TRKGL L PT LE P+ CFVC T ++D++LDT LT + V RVLK RLGVNEP+V +G++ +YEEG+ A L NL K L+DLPGGG+ D TS+ VEDFSQDL V + ++H+ FDEEEVP+GF + G AA A PS Sbjct: 297 WDRDVWGVEESAR------EFSACLHDVYSS--AALREHVGSMEFDKDDKIAMRFVTAACNLRSVVFHIPLQSYHDAKGIAGNIIAAIATTNAIIAGLQVLEALKIMRAAKPIREACNYVWCLREGTRKGLLLQPTALEPPSKGCFVCGTRTVDVHLDTAALTFGEFVSRVLKSRLGVNEPSVSVGSSLIYEEGEDAAQGLRANLPKRLRDLPGGGVTDGTSLSVEDFSQDLDVTVCVYHRVFDEEEVPDGFVVGGQMPVASAAKPSAEPPS 560
BLAST of mRNA_E-fasciculatus_F_contig102.191.1 vs. uniprot
Match: G4YWP8_PHYSP (SUMO-activating enzyme subunit n=6 Tax=Phytophthora TaxID=4783 RepID=G4YWP8_PHYSP) HSP 1 Score: 241 bits (614), Expect = 4.490e-65 Identity = 134/276 (48.55%), Postives = 177/276 (64.13%), Query Frame = 3 Query: 651 GVISAIRDVWPRIVPGLQHLCRVECLCCRFCRCFSRVREKVVAAAKGEGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGGIPIGKACRYTYCLREPTRKGLYLLPTPLEKPANSCFVCNTSSLDLYLDTETLTLADLVDRVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDTSVEVEDFSQDLTVKLNIFHKTFDE--EEVPEGFTISGDAKARPAAD 1472 G + + RDVW EC+ RF C R+ A+ +FDKDD AM FV AA+NLR+ VF IP++S Y KG+AGNIIPAIATTNAI+AG QV+EA +IL+ P+G+AC+YT+C R KG L PT LEKP C+VC+ +++L +DT + L DLV++VLK++LGVNEPT+ +GA T+YEEG+ A++ L VNL K L DLPG GI +T+V VEDFSQD + + H+ E EE E F + GD A+ AAD Sbjct: 300 GKVWSDRDVWSVS----------ECVT-RFVSCIVRILNS--EQARANLGSYEFDKDDATAMEFVTAAANLRAFVFSIPMESLYSCKGIAGNIIPAIATTNAIVAGFQVLEAFRILQAAKPVGEACKYTHCNRSWNAKGELLQPTNLEKPNPQCYVCSKHTVELAVDTNRMLLRDLVEQVLKKKLGVNEPTISIGANTIYEEGEDAEESLAVNLEKKLADLPGKGIHHETTVSVEDFSQDFRCNIRVLHRDAKEFGEEATELFALGGDI-AKLAAD 561
BLAST of mRNA_E-fasciculatus_F_contig102.191.1 vs. uniprot
Match: K3WJR7_GLOUD (SUMO-activating enzyme subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJR7_GLOUD) HSP 1 Score: 237 bits (604), Expect = 9.390e-64 Identity = 124/251 (49.40%), Postives = 166/251 (66.14%), Query Frame = 3 Query: 735 RFCRCFSRVREKVVAAAKGEGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGGIPIGKACRYTYCLREPTRKGLYLLPTPLEKPANSCFVCNTSSLDLYLDTETLTLADLVDRVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDTSVEVEDFSQDLTVKLNIFHKTFDE----EEVPEGFTISGDAKARPAADT 1475 RF C ++ + A+ +FDKDD +AM FV AA+NLR+ VF I ++S Y KG+AGNIIPAIATTNAI+AG+QV+EA KIL+ PIG+ C YTYC R +G+ L P L KP C+VC+ L+L +DT L DLVD+VLK++LGVNEPT+ +G++T+YEEG+ A++ LVVNL KLL +LPG GI DT + +EDFSQD + + HK DE E+ E F + G+ + AA T Sbjct: 313 RFFACIVKILQS--EEARAHLGSYEFDKDDAVAMEFVTAAANLRAAVFTITMESLYSCKGIAGNIIPAIATTNAIVAGIQVLEAFKILRAAKPIGETCSYTYCNRSWDSRGVLLNPVALSKPNPKCYVCSKHMLELVIDTNKTYLRDLVDKVLKKKLGVNEPTISIGSSTIYEEGEDAEESLVVNLNKLLVNLPGKGISHDTVISIEDFSQDFRCSIRVLHK--DEAGFGEDATEFFALGGEIQQLNAAST 559
BLAST of mRNA_E-fasciculatus_F_contig102.191.1 vs. uniprot
Match: A0A5D6XUV3_9STRA (SUMO-activating enzyme subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUV3_9STRA) HSP 1 Score: 234 bits (597), Expect = 1.220e-62 Identity = 124/247 (50.20%), Postives = 163/247 (65.99%), Query Frame = 3 Query: 735 RFCRCFSRVREKVVAAAKGEGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGGIPIGKACRYTYCLREPTRKGLYLLPTPLEKPANSCFVCNTSSLDLYLDTETLTLADLVDRVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDTSVEVEDFSQDLTVKLNIFHKTFDE--EEVPEGFTISGDAKARPAA 1469 RF C +V + ++ +FDKDD IAM FV AA+NLR+ VF IP++S Y KG+AGNIIPAIATTNAI+AGLQV+EALKIL+ P+G+ C YTYC R +G+ L P L P C+VC+ L+L +DTE L D VD+VLK++LGVNEPTV +G+ T+YEEG+ A++ L VNL KLL +LPG GI DT V +EDFSQD + + H+ + E+ E F + GD + AA Sbjct: 317 RFFACIVKVLQS--EQSRAHLGSYEFDKDDAIAMEFVTAAANLRAAVFAIPMESLYSCKGIAGNIIPAIATTNAIVAGLQVLEALKILRAEKPLGEVCSYTYCNRVWDSRGVLLNPVALSPPNPQCYVCSKHMLELAIDTEKTHLRDFVDKVLKKKLGVNEPTVSIGSNTIYEEGEDAEESLAVNLGKLLVNLPGKGIGHDTVVSIEDFSQDFRCSIRVLHRDEESFGEKATELFALGGDVQQLDAA 561
BLAST of mRNA_E-fasciculatus_F_contig102.191.1 vs. uniprot
Match: A0A3M6VQM9_9STRA (SUMO-activating enzyme subunit n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQM9_9STRA) HSP 1 Score: 233 bits (594), Expect = 2.430e-62 Identity = 129/270 (47.78%), Postives = 174/270 (64.44%), Query Frame = 3 Query: 651 GVISAIRDVWPRIVPGLQHLCRVECLCCRFCRCFSRVREKVVAAAKGEGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGGIPIGKACRYTYCLREPTRKGLYLLPTPLEKPANSCFVCNTSSLDLYLDTETLTLADLVDRVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDTSVEVEDFSQDLTVKLNIFHKTFDEE----EVPEGFTISGD 1448 G I + RDVW EC+ RF C +R+ + A +FDKDD AM FVAAA+NLR+ VF IP++S Y KG+AGNIIPAIATTNAI+AG+QV+EA +IL+ P+ +AC YT+C R +G+ L P+ LEKP C+VC+ +++L +DT + L +LVD+VLK++LGVNEPT+ +GA T+YEEG+ A+ L VNL K L DLPG GI +T+V VEDFSQD + + H+ DEE + E F + GD Sbjct: 299 GKIWSDRDVWSVS----------ECVT-RFLSCITRILGSELTRANL--GSYEFDKDDATAMEFVAAAANLRASVFSIPMESLYSCKGIAGNIIPAIATTNAIVAGIQVLEAFRILQAAKPVREACTYTHCNRSWNSRGVLLQPSALEKPNPQCYVCSKHTVELAVDTNRMLLRNLVDQVLKKKLGVNEPTISIGANTIYEEGEDAETSLAVNLEKKLVDLPGKGIHHETTVSVEDFSQDFRCNIRVLHR--DEEAFGDDATELFALGGD 553
BLAST of mRNA_E-fasciculatus_F_contig102.191.1 vs. uniprot
Match: M4B998_HYAAE (SUMO-activating enzyme subunit n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B998_HYAAE) HSP 1 Score: 233 bits (593), Expect = 3.600e-62 Identity = 126/256 (49.22%), Postives = 169/256 (66.02%), Query Frame = 3 Query: 720 ECLCCRFCRCFSRVREKVVAAAKGEGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGGIPIGKACRYTYCLREPTRKGLYLLPTPLEKPANSCFVCNTSSLDLYLDTETLTLADLVDRVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDTSVEVEDFSQDLTVKLNIFHKTFDE--EEVPEGFTISGDAKARPAADTDA 1481 EC+ RF C +R+ A+ +FDKDD AM FV AA+NLR+ VF I ++S Y KG+AGNIIPAIATTNAI+AG QV+EA IL+ P+G+AC+YT+C R G+ + P LEKP C+VC+ +++L +DT + L DLVD+VLK++LG+NEPT+ +GA T+YEEG+ A+ RL VNL K L DLPG GI +T+V VEDFSQD + + H+ E E+ E F + GD A+ AAD A Sbjct: 311 ECVT-RFVSCITRILGN--EQARANLGSYEFDKDDVTAMEFVTAAANLRASVFSIEMESLYSCKGIAGNIIPAIATTNAIVAGFQVLEAYSILRAAKPVGEACKYTHCNRSWNASGVLIQPCALEKPNLRCYVCSKRTVELAVDTTHMLLCDLVDQVLKKKLGMNEPTISIGANTIYEEGEDAETRLAVNLGKKLMDLPGKGIHHETTVSVEDFSQDFRCNIRVLHRDQGEFGEDATELFALGGDI-AKLAADLKA 562
BLAST of mRNA_E-fasciculatus_F_contig102.191.1 vs. uniprot
Match: A0A662YIP5_9STRA (SUMO-activating enzyme subunit n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YIP5_9STRA) HSP 1 Score: 233 bits (593), Expect = 5.020e-62 Identity = 125/268 (46.64%), Postives = 169/268 (63.06%), Query Frame = 3 Query: 651 GVISAIRDVWPRIVPGLQHLCRVECLCCRFCRCFSRVREKVVAAAKGEGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGGIPIGKACRYTYCLREPTRKGLYLLPTPLEKPANSCFVCNTSSLDLYLDTETLTLADLVDRVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDTSVEVEDFSQDLTVKLNIFHKTFDE--EEVPEGFTISGD 1448 G + + RDVW EC+ RF C +RV + +FDKDD AM FV AA+NLR+ VF IP++S Y KG+AGNIIPAIATTNAI+AG QV+EA +IL+ P+G+AC+YTYC R +G+ L P+ L KP C+VC+ ++L +DT + L +LV+ VLK++LGVNEPT+ LGA T+YEEG+ A+ L VNL K L LPG G++ DT V +EDFSQD + + H+ D+ E+ E F + GD Sbjct: 313 GKVWSDRDVWSV----------AECVT-RFVSCIARVLAS--EQTRAHLGSYEFDKDDATAMEFVTAAANLRASVFSIPMESLYSCKGIAGNIIPAIATTNAIVAGFQVLEAFRILQAAKPVGEACKYTYCNRSWNARGVLLDPSALSKPNPQCYVCSKHIVELAVDTNRMLLRELVELVLKKKLGVNEPTISLGANTIYEEGEDAEPSLAVNLGKRLAALPGKGVQHDTMVSIEDFSQDFRCSIRVLHRDEDQFGEDATELFALGGD 567
BLAST of mRNA_E-fasciculatus_F_contig102.191.1 vs. uniprot
Match: A0A3R7JAH1_9STRA (SUMO-activating enzyme subunit n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JAH1_9STRA) HSP 1 Score: 230 bits (586), Expect = 3.000e-61 Identity = 125/263 (47.53%), Postives = 171/263 (65.02%), Query Frame = 3 Query: 669 RDVWPRIVPGLQHLCRVECLCCRFCRCFSRVR-EKVVAAAKGEGDGLQFDKDDQIAMNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEALKILKGGIPIGKACRYTYCLREPTRKGLYLLPTPLEKPANSCFVCNTSSLDLYLDTETLTLADLVDRVLKQRLGVNEPTVGLGATTLYEEGDGADDRLVVNLTKLLKDLPGGGIKDDTSVEVEDFSQDLTVKLNIFHKTFDE--EEVPEGFTISGD 1448 RDVW EC+ RF C R+ + + A G +FDKDD AM FV AA+NLR+ VF I ++S Y KG+AGNIIPAIATTNAI+AG QV+EA +IL+ P+ +AC+YTYC R +G+ L P+ L KP C+VC+ +++L +DT+ + L DLV++VLK++LGVNEPT+ LGA T+YEEG+ A+ L VNL K L +LPG GI+ +T+V VEDFSQD + + H+ +E E+ E F + GD Sbjct: 306 RDVWSV----------AECVA-RFVSCIVRILGSEQLRAHLGS---YEFDKDDATAMEFVTAAANLRASVFSITMESLYSCKGIAGNIIPAIATTNAIVAGFQVLEAFRILQAAKPVSEACKYTYCNRSWNARGVLLDPSALSKPNPQCYVCSKHTVELAVDTKRMLLRDLVEQVLKKKLGVNEPTISLGANTIYEEGEDAETSLTVNLEKKLTELPGKGIQHETTVSVEDFSQDFRCNVRVLHRDEEEFGEDATELFALGGD 554 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig102.191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig102.191.1 >prot_E-fasciculatus_F_contig102.191.1 ID=prot_E-fasciculatus_F_contig102.191.1|Name=mRNA_E-fasciculatus_F_contig102.191.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=344bp MNFVAAASNLRSRVFQIPVQSSYEAKGVAGNIIPAIATTNAIIAGLQVMEback to top mRNA from alignment at E-fasciculatus_F_contig102:27232..36292- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig102.191.1 ID=mRNA_E-fasciculatus_F_contig102.191.1|Name=mRNA_E-fasciculatus_F_contig102.191.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9061bp|location=Sequence derived from alignment at E-fasciculatus_F_contig102:27232..36292- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig102:27232..36292- >mRNA_E-fasciculatus_F_contig102.191.1 ID=mRNA_E-fasciculatus_F_contig102.191.1|Name=mRNA_E-fasciculatus_F_contig102.191.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2064bp|location=Sequence derived from alignment at E-fasciculatus_F_contig102:27232..36292- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |