mRNA_E-fasciculatus_F_contig1015.155.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1015.155.1 vs. uniprot
Match: D8LKL2_ECTSI (Tubulin-specific chaperone A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL2_ECTSI) HSP 1 Score: 201 bits (512), Expect = 2.340e-65 Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 1 Query: 1 MADTARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAGTEGLPTDQLEEAKGLLVEAGIPA 327
MADTARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAG EGLPTDQLEEAKGLLVEAGI A
Sbjct: 1 MADTARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAGAEGLPTDQLEEAKGLLVEAGITA 109
BLAST of mRNA_E-fasciculatus_F_contig1015.155.1 vs. uniprot
Match: A0A7S2W3S2_9STRA (Tubulin-specific chaperone A n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3S2_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.590e-28 Identity = 62/105 (59.05%), Postives = 78/105 (74.29%), Query Frame = 1 Query: 7 DTARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAGTEGLP-TDQLEEAKGLLVEAG 318
D A+QL+IK V RM KEVA Y EA+ENEA+VQK +D GKD +D++K EEVL+ESYMMIPDSK+RL KA+ED+ F+ EH EG+ T+QLE A +L E G
Sbjct: 11 DPAKQLRIKCNVVTRMAKEVAFYHREAEENEARVQKFKDAGKDIHDVKKAEEVLEESYMMIPDSKNRLQKAVEDLLVFVEEHRKEEGVAGTEQLEAALQVLTEHG 115
BLAST of mRNA_E-fasciculatus_F_contig1015.155.1 vs. uniprot
Match: A0A835YMR5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR5_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.010e-27 Identity = 63/104 (60.58%), Postives = 78/104 (75.00%), Query Frame = 1 Query: 13 ARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAGTEGLP-TDQLEEAKGLLVEAGI 321
ARQLKIKLGVCKR+ KEVASYE EA NEAKV+ M+D+G+DA+D+RK EE+L ES MMIPDSKSRL A+E++ G L G EG+ TD +AK L+ G+
Sbjct: 3 ARQLKIKLGVCKRLAKEVASYEKEASTNEAKVRAMKDEGRDAHDVRKAEEILAESCMMIPDSKSRLQVAVEELAGMLAASEGEEGVKDTDDYADAKALVEAHGL 106
BLAST of mRNA_E-fasciculatus_F_contig1015.155.1 vs. uniprot
Match: A0A6U3QVJ1_9STRA (Tubulin-specific chaperone A n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QVJ1_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.670e-25 Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 1 Query: 7 DTARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAGTEGLPTDQLEEAKGLL 306
D +QLKIK CKR+ KE YE E KENE K+ KM+ DG+D YDI+K EEVL ESYMM+PDSK+RL KALED+ FL ++ ++ + EAK ++
Sbjct: 10 DPEKQLKIKASACKRLAKEAGYYEKEVKENEGKLAKMKADGRDPYDIKKFEEVLGESYMMVPDSKARLKKALEDLSLFLKNNSNVLDPESESMSEAKSIV 109
BLAST of mRNA_E-fasciculatus_F_contig1015.155.1 vs. uniprot
Match: K8Z7U7_NANGC (Tubulin-specific chaperone A n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7U7_NANGC) HSP 1 Score: 95.5 bits (236), Expect = 3.790e-23 Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 7 DTARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFL 243
+ RQLKIK+GV +R++KE ASYE EA E K+ MR +G+D YDI+KQEEVLQESYMMIPDSKSRL ALE + FL
Sbjct: 14 ELLRQLKIKVGVARRLIKEAASYEKEAAAQEQKIAGMRTEGRDTYDIKKQEEVLQESYMMIPDSKSRLQAALEHLAAFL 92
BLAST of mRNA_E-fasciculatus_F_contig1015.155.1 vs. uniprot
Match: G7K4H6_MEDTR (Tubulin-specific chaperone A n=4 Tax=Trifolieae TaxID=163742 RepID=G7K4H6_MEDTR) HSP 1 Score: 90.9 bits (224), Expect = 1.890e-21 Identity = 50/103 (48.54%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 7 DTARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAG-TEGLPTDQLEEAKGLLVE 312
DT R LKIK CKR+VKE+ SYE E + AK M++ G D YD+++QE VL ES MMIPD + RL ALED++G LGE T+ + +++EA+ ++VE
Sbjct: 2 DTVRSLKIKTSTCKRLVKELHSYEKEVEREAAKTADMKNKGADPYDLKQQENVLGESRMMIPDCRKRLEAALEDLKGILGELLNETDKKESPEIDEARNIIVE 104
BLAST of mRNA_E-fasciculatus_F_contig1015.155.1 vs. uniprot
Match: A0A7S4I4N1_9STRA (Tubulin-specific chaperone A n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I4N1_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.170e-20 Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 4 ADTARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAGTEGLPTDQ--LEEAKGLLVEAGI 321
AD RQL IK C+R++KE A YE E KENE K+Q M+++ +D YDI+K EEV+ ES MM+PDS++R+ +ALED+E +L EG+ + A+ LL E G
Sbjct: 8 ADPERQLMIKTKACQRLIKESAYYEEEVKENETKLQVMKEENRDPYDIKKFEEVVDESRMMVPDSRARMRRALEDLEQYLQSDEVKEGVNEEGGWCNAARTLLKEQGF 115
BLAST of mRNA_E-fasciculatus_F_contig1015.155.1 vs. uniprot
Match: A0A0K8TUG7_TABBR (Tubulin-specific chaperone A n=1 Tax=Tabanus bromius TaxID=304241 RepID=A0A0K8TUG7_TABBR) HSP 1 Score: 88.6 bits (218), Expect = 1.340e-20 Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 1 Query: 1 MADTA-RQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAGTEGLPTDQLEEAKGLLVE 312
MAD RQLKIK GV KR+ KE + YE EA+ +++V+K + DGKD +DIRKQEEVL+ES MM+PD + RLAKA+E++ FL E T + EA LL E
Sbjct: 1 MADPRLRQLKIKTGVVKRLAKEKSVYEKEAETQKSRVEKYKSDGKDVHDIRKQEEVLKESLMMVPDCQRRLAKAVEELNEFLKSEE--ELKETKEYAEATALLEE 103
BLAST of mRNA_E-fasciculatus_F_contig1015.155.1 vs. uniprot
Match: C6T107_SOYBN (Tubulin-specific chaperone A n=1 Tax=Glycine max TaxID=3847 RepID=C6T107_SOYBN) HSP 1 Score: 88.6 bits (218), Expect = 1.530e-20 Identity = 48/104 (46.15%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 1 MADTARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAGTEGLPTDQLEEAKGLLVE 312
MA T R LKIK CKR+VKE+ SYE E + AK M++ G D YD+++QE VL ES MMIPD + RL AL D++G L E ++ + +++EA+ +VE
Sbjct: 1 MATTVRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCRKRLEAALADLKGLLAELEESDEKASPEIDEARNTIVE 104
BLAST of mRNA_E-fasciculatus_F_contig1015.155.1 vs. uniprot
Match: A0A7S2HK18_9STRA (Tubulin-specific chaperone A n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HK18_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 5.600e-20 Identity = 53/102 (51.96%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 7 DTARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGK-DAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAGTEGLP-TDQLEEAKGLL 306
D ++LKIK VC R+ KE++ Y+ EAK NE +VQ M+DD K D YD+RK EEVL ESYMMIP+SK+R K+L+D+ FL EH TD+L A +L
Sbjct: 17 DPLKKLKIKCNVCCRIEKEISFYQDEAKMNEDRVQGMKDDDKFDEYDVRKAEEVLGESYMMIPESKNRFQKSLDDLSVFLEEHIKEPAFKDTDELTRALKIL 118 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1015.155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1015.155.1 >prot_E-fasciculatus_F_contig1015.155.1 ID=prot_E-fasciculatus_F_contig1015.155.1|Name=mRNA_E-fasciculatus_F_contig1015.155.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=110bp MADTARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRback to top mRNA from alignment at E-fasciculatus_F_contig1015:12835..18249- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1015.155.1 ID=mRNA_E-fasciculatus_F_contig1015.155.1|Name=mRNA_E-fasciculatus_F_contig1015.155.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5415bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1015:12835..18249- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1015:12835..18249- >mRNA_E-fasciculatus_F_contig1015.155.1 ID=mRNA_E-fasciculatus_F_contig1015.155.1|Name=mRNA_E-fasciculatus_F_contig1015.155.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=660bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1015:12835..18249- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |