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Homology
BLAST of mRNA_E-fasciculatus_F_contig10146.150.1 vs. uniprot
Match: D7FIZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIZ8_ECTSI) HSP 1 Score: 606 bits (1563), Expect = 4.870e-199 Identity = 323/350 (92.29%), Postives = 333/350 (95.14%), Query Frame = 1
Query: 1 GREKRVDVDDALWLFMRHWLVVRQHRRSLVDRALGQVAPAPSSAASTAAGQDAAQAVIPSPLVSVDSFRAVTTRLENLSRSAPPRGVADLVYVDAYMVASSLSRRPENKAMSHRESTKTALLSSPVLLWDVSGARREQQMPPTFSNRAMRSWLLSSWARYSDPIKAEVPVMLEELQHVSDTTPADDTTREPTGVESAAADLPAGGAPAHTPSGAPGSGGSATKPANVEAAKLVRALEKIRSEVSRLDGYMKDLETFHKEDSMAQSTPVIVPKEASAEQQEQQEQTLSPEIVKKLSRPGEVERASKEMRSVMTILAAVYRRMRPNDPRDFVQDSWASGRRTSLRRTSFNSY 1050
GREKRVDVDDALWLFMRHWLVVRQHR SLVDRALGQVAPAPSSAAS AAG DAAQA PSPLVSVD FR VTTRLEN+SRSAPPRGVADLVYVDA+MVASSLSRRPENKAMSHRESTKTALLSSPVLLWD SGARREQQMPP FSNRAMRSWLLSSWARYSDPIKAEV VMLEELQHVSDTTPA+ T+EPTGVESAAADLPAG APAHTP+GA GSGGSA +PANVEAAKLVRALEKIRSEV+RLDGYMKDL+TFHKEDSMAQST V++PKEASAEQQEQQEQTLSPEIVKKLSRPGEVERASKEMRSVM ILAAVYRRMRPNDPRDFVQDSWASGRRTSLRRTSFNSY
Sbjct: 1432 GREKRVDVDDALWLFMRHWLVVRQHRISLVDRALGQVAPAPSSAASAAAGNDAAQAASPSPLVSVDGFRVVTTRLENMSRSAPPRGVADLVYVDAFMVASSLSRRPENKAMSHRESTKTALLSSPVLLWDASGARREQQMPPLFSNRAMRSWLLSSWARYSDPIKAEVLVMLEELQHVSDTTPANGITQEPTGVESAAADLPAGEAPAHTPTGARGSGGSAARPANVEAAKLVRALEKIRSEVNRLDGYMKDLDTFHKEDSMAQSTAVVIPKEASAEQQEQQEQTLSPEIVKKLSRPGEVERASKEMRSVMMILAAVYRRMRPNDPRDFVQDSWASGRRTSLRRTSFNSY 1781
BLAST of mRNA_E-fasciculatus_F_contig10146.150.1 vs. uniprot
Match: A0A6H5LD55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD55_9PHAE) HSP 1 Score: 498 bits (1281), Expect = 1.870e-172 Identity = 271/308 (87.99%), Postives = 281/308 (91.23%), Query Frame = 1
Query: 1 GREKRVDVDDALWLFMRHWLVVRQHRRSLVDRALGQVAPAPSSAASTAAGQDAAQAVIPSPLVSVDSFRAVTTRLENLSRSAPPRGVADLVYVDAYMVASSLSRRPENKAMSHRESTKTALLSSPVLLWDVSGARREQQMPPTFSNRAMRSWLLSSWARYSDPIKAEVPVMLEELQHVSDTTPADDTTREPTGVESAAADLPAGGAPAHTPSGAPGSGGSATKPANVEAAKLVRALEKIRSEVSRLDGYMKDLETFHKEDSMAQSTPVIVPKEASAEQQEQQEQTLSPEIVKKLSRPGEVERASKEMR 924
GREKRVDVDDALWLFMRHW VVRQHR SLVDRALGQVAPAPSSAAS AAG DAAQAV PSPLVSVD FR VTTRLEN+SRSAPPRGVADLVYVDA+MVASSLSRRPENKAMSHRESTKTALLSSPVLLWD SGARREQQMPPTFSNRAMRSWLLSSWARYSDPIKAEV VMLEELQ+VSDTTPAD T+EP GVE+AAADLPAGGAPAHTP+GA GSGGSA +PANVEAAKLVRALEKIRSE DL+TFHKE SMAQST ++PKEASAEQQEQQEQTLSPEIVKKLSRPGEVER SKEMR
Sbjct: 122 GREKRVDVDDALWLFMRHWSVVRQHRISLVDRALGQVAPAPSSAASAAAGNDAAQAVSPSPLVSVDGFRVVTTRLENMSRSAPPRGVADLVYVDAFMVASSLSRRPENKAMSHRESTKTALLSSPVLLWDASGARREQQMPPTFSNRAMRSWLLSSWARYSDPIKAEVLVMLEELQYVSDTTPADGITQEPAGVENAAADLPAGGAPAHTPTGARGSGGSAARPANVEAAKLVRALEKIRSE---------DLDTFHKEGSMAQSTAAVIPKEASAEQQEQQEQTLSPEIVKKLSRPGEVERVSKEMR 420
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 581.3 |
| Seed ortholog evalue | 3e-163 |
| Seed eggNOG ortholog | 2880.D7FIZ8 |
| EggNOG OGs | 2CMZH@1,2QSXT@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | mitochondrion |
| Exons | 6 |
| Model size | 1261 |
| Cds size | 1008 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10146.150.1 >prot_E-fasciculatus_F_contig10146.150.1 ID=prot_E-fasciculatus_F_contig10146.150.1|Name=mRNA_E-fasciculatus_F_contig10146.150.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=336bp
MRHWLVVRQHRRSLVDRALGQVAPAPSSAASTAAGQDAAQAVIPSPLVSV DSFRAVTTRLENLSRSAPPRGVADLVYVDAYMVASSLSRRPENKAMSHRE STKTALLSSPVLLWDVSGARREQQMPPTFSNRAMRSWLLSSWARYSDPIK AEVPVMLEELQHVSDTTPADDTTREPTGVESAAADLPAGGAPAHTPSGAP GSGGSATKPANVEAAKLVRALEKIRSEVSRLDGYMKDLETFHKEDSMAQS TPVIVPKEASAEQQEQQEQTLSPEIVKKLSRPGEVERASKEMRSVMTILA AVYRRMRPNDPRDFVQDSWASGRRTSLRRTSFNSY* back to topmRNA from alignment at E-fasciculatus_F_contig10146:742..3846- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig10146.150.1 ID=mRNA_E-fasciculatus_F_contig10146.150.1|Name=mRNA_E-fasciculatus_F_contig10146.150.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3105bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10146:742..3846- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) GGGCGAGAAAAGAGGGTGGATGTGGACGACGCTCTGTGGCTCTTCATGCG
GCACTGGTTGGTGGGTGGCAACCAGAGTTGGCTGCACGATGCGATAGACA
ATAAGCTGCAATTCGTTCGAGTGCACATGCAGGACTACTGTAGTGCGAAA
AGCGACTGCCTCACCGTTGCTTCCCTTCGCCCGCCCTGGACGTTGACCTC
TTTCACTCCCAAACTTTGGTCATGTCGCAGGTTGTACGGCAACACCGAAG
AAGCCTGGTTGACCGCGCCCTCGGTCAAGTCGCCCCTGCCCCTTCCTCTG
CCGCCTCGACAGCAGCTGGACAAGACGCCGCTCAAGCCGTCATTCCTTCT
CCCTTGGTGTCAGTGGACAGTTTCCGCGCAGTGACGACGCGGTTAGAGAA
TCTCAGCAGATCGGCCCCTCCGAGGGGTGTAGCGGACCTGGTTTACGTTG
ACGCCTACATGGTGGCCTCAAGTTTGTCTCGTCGGCCTGAGGTACGTTCT
GTTTTTTGACGGATGAATTTCTTTCCTTTCAAGTCAAGAGGGCTTAGAGG
TGGGTGCGGCTGCTCTCTCCGGATGAGAGCAGAAGGTAGGAACGTGCCTT
TATTCGGAGAGGTTTTGAGCCCGATAGTCTAAATGGGTCCTTTCCGGAAT
GGACGAGGTTTGCACTAAACAGACACGACTCTTCCAATAAAAGGGTTGTC
GCATCTGGGAGAGGTATATTGTCACAAGTAAGGTACCCGGTGAAGCAGGT
TTTGCTACGACATCAATGAGGCGTTCTGGCTGATCCGCCCGGTGTTGGAT
CGTACCCATGATGCAGAACAGAGTCATGGGTCGGAGGCATGTGAAGACGC
AATAAGCAGACCATCGCTTCGCAATAAGGCTTGCGATCGCAAGACGCTTC
GGCATCGTGCGTACAGCGTCTCGGACGAGGAGCCTTCGTGCCCTTGTCGT
AGGAGACACACCCATCTTGCTTGCTCTTTCGCGAAGTCGAGATTCCCCGA
AGAGATAACAGCGTCGTCCGATTCCCTCTGTTCGTGGTTGGAGTGAGCTC
GTCCCTACATGACTGTTGCCTTTCAGGCCACCCACAACGACACCCGGCTC
TCTCTCTCCCCAGGGCATGCGCCTTCTCACTTGATGCAGCTCGACTCACT
AGATCCTTCACATGGTGTACAATGTATCTAAGAAATCGTCCTTCTTCCCT
CGCTCCATTCCCTTGCTTCTTTTTCTGTGACCGCCGTCCTACAGAACAAG
GCCATGTCTCACCGTGAGTCCACAAAGACTGCCCTGCTGTCAAGCCCTGT
ATTGCTTTGGGACGTCAGTGGGGCAAGGCGGGAGCAGCAGATGCCTCCGA
CATTCAGCAACCGCGCCATGAGAAGCTGGCTCTTGTCGTCATGGGCTCGA
TATTCCGACCCCATCAAGGCCGAGGTCCCAGTCATGTTGGAAGAGCTGCA
ACATGTCTCGGACACAACACCAGCCGATGACACCACCCGAGAGCCAACCG
GCGTTGAGAGCGCTGCAGCCGACCTGCCGGCCGGTGGGGCGCCAGCGCAC
ACGCCGTCCGGGGCACCAGGGTCTGGAGGTGACAAGAAACATTGGATGGA
GCTCTTTGCACGTTTGGGGCAAGACTGTGCGTAACCGATCATATCTTGCC
GTACATGATGCCGTGGGAGCTGTGAAACTTCAGACCACCAGCCAGTGCCA
ACATCCCATGAGATGTCTGGCTAGATCACAAATGCCCAAGAAGATCACGC
CCGTCCCTCCCTCCATATATAACTGGCAATACACCAAGCAGGAAGCGCTA
CGAAACCTGCAAACGTCGAGGCGGCGAAGCTCGTCAGAGCGCTGGAGAAG
ATTCGGAGCGAGGTCAGCCGCTTAGATGGCTACATGAAGGCGAGCAACAT
GTCCTGGGACGTGTGGACCAGCGATCTTGTCATGTTTCTCGAAAATCCAC
GCGCATCCCTCCAAAATGTTGGCGGAAATCTACTCGATTGTATGGACACT
CAGTTGCTCTCGCTTGGCCGCTTTCCAAGCCTTTATTGACACTCTTCGGC
CCGAAGTTAGCGAGCGTATCAATTATCACGTGTGCCAGGCGTAAGGACGT
GCGCTTCCTCTCTCGTGGATGGGTATGAAATATCCGACTGTAAAAACAGC
GTTCTAAAAATAGGGGGCGGGGGGCCTACCTTTGAGATCCAATCTAAGCC
CCCCCTCACCCGCCGCACGATTATCGTGGAAACAACAAATAAACAATACT
TAGGACCTGGAAACGTTCCACAAGGAGGACAGTATGGCGCAGTCCACCCC
TGTCATCGTCCCGAAGGAAGCATCCGCTGAGCAACAGGAGCAGCAAGAGC
AAACTCTCTCTCCGGAGATAGTAAAAAAGCTGTCTAGACCCGGAGAGGTG
GAGCGGGCCTCCAAAGAGATGAGGTGAGGTCGGCAAATCTGTTGTCAATC
CAACCGTCTGTGATGTCCAACCTCACATGGAGGAGGTGTTTCGGAGGGGT
ATCCCATCCGATATACTATACACCAAATATGCTGGAGTGCGCACTGCGCA
CTATTTATGTAATTTCGATACGAGCACGATCCCGATTAGGAGCACGCCGG
GCTGTAGCCTGACCAGGTTTTCCTCTGGGAAGGGACGAGAGGGGAGGAGG
GGTCTACACCACTCAAGCTATCGGAAACGCGCAGCTGACGTCTGTTTATT
CAACCGCCCCTTTGTCCCTTTGTTTGTGTCATTCATCCGCCCCTTGCTTG
GAACAACCTATCCACAGATCTGTCATGACGATTCTGGCCGCGGTCTACCG
GCGCATGAGGCCAAACGATCCCCGAGACTTCGTGCAAGACTCTTGGGCCT
CGGGGAGACGCACCTCCCTTCGACGTACCAGCTTCAACTCGTACTAAGTT
CGAAGACGGTCTCTCAAAGATGGACCCGACCACCAGTGCATTGATCAACC
GGACATTCATTCACGCTTTGTTTGGTGTTCTTACTGATTTCATATTGAGG
AGAGTATCACCAATCTACGAAGGACCACCCTTCCTTTCAGACAAACCCAG
GAGGTGTGCTGATATCAAGTATTTTCCGTGGAAGGTCACTGACGCTAGCC
AAAAA back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig10146:742..3846- >mRNA_E-fasciculatus_F_contig10146.150.1 ID=mRNA_E-fasciculatus_F_contig10146.150.1|Name=mRNA_E-fasciculatus_F_contig10146.150.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2016bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10146:742..3846- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) ATGCGGCACTGGTTGATGCGGCACTGGTTGGTTGTACGGCAACACCGAAG AAGCCTGGTTGACCGCGCCCTCGGTCAAGTCGCCCCTGCCCCTTCCTCTG CCGCCTCGACAGCAGCTGGACAAGACGCCGCTCAAGCCGTCATTCCTTCT CCCTTGGTGTCAGTGGACAGTTTCCGCGCAGTGACGACGCGGTTAGAGAA TCTCAGCAGATCGGCCCCTCCGAGGGGTGTAGCGGACCTGGTTTACGTTG ACGCCTACATGGTGGCCTCAAGTTTGTCTCGTCGGCCTGAGGTTGTACGG CAACACCGAAGAAGCCTGGTTGACCGCGCCCTCGGTCAAGTCGCCCCTGC CCCTTCCTCTGCCGCCTCGACAGCAGCTGGACAAGACGCCGCTCAAGCCG TCATTCCTTCTCCCTTGGTGTCAGTGGACAGTTTCCGCGCAGTGACGACG CGGTTAGAGAATCTCAGCAGATCGGCCCCTCCGAGGGGTGTAGCGGACCT GGTTTACGTTGACGCCTACATGGTGGCCTCAAGTTTGTCTCGTCGGCCTG AGAACAAGGCCATGTCTCACCGTGAGTCCACAAAGACTGCCCTGCTGTCA AGCCCTGTATTGCTTTGGGACGTCAGTGGGGCAAGGCGGGAGCAGCAGAT GCCTCCGACATTCAGCAACCGCGCCATGAGAAGCTGGCTCTTGTCGTCAT GGGCTCGATATTCCGACCCCATCAAGGCCGAGGTCCCAGTCATGTTGGAA GAGCTGCAACATGTCTCGGACACAACACCAGCCGATGACACCACCCGAGA GCCAACCGGCGTTGAGAGCGCTGCAGCCGACCTGCCGGCCGGTGGGGCGC CAGCGCACACGCCGTCCGGGGCACCAGGGTCTGGAGAACAAGGCCATGTC TCACCGTGAGTCCACAAAGACTGCCCTGCTGTCAAGCCCTGTATTGCTTT GGGACGTCAGTGGGGCAAGGCGGGAGCAGCAGATGCCTCCGACATTCAGC AACCGCGCCATGAGAAGCTGGCTCTTGTCGTCATGGGCTCGATATTCCGA CCCCATCAAGGCCGAGGTCCCAGTCATGTTGGAAGAGCTGCAACATGTCT CGGACACAACACCAGCCGATGACACCACCCGAGAGCCAACCGGCGTTGAG AGCGCTGCAGCCGACCTGCCGGCCGGTGGGGCGCCAGCGCACACGCCGTC CGGGGCACCAGGGTCTGGAGGAAGCGCTACGAAACCTGCAAACGTCGAGG CGGCGAAGCTCGTCAGAGCGCTGGAGAAGATTCGGAGCGAGGTCAGCCGC TTAGATGGCTACATGAAGGAAGCGCTACGAAACCTGCAAACGTCGAGGCG GCGAAGCTCGTCAGAGCGCTGGAGAAGATTCGGAGCGAGGTCAGCCGCTT AGATGGCTACATGAAGGACCTGGAAACGTTCCACAAGGAGGACAGTATGG CGCAGTCCACCCCTGTCATCGTCCCGAAGGAAGCATCCGCTGAGCAACAG GAGCAGCAAGAGCAAACTCTCTCTCCGGAGATAGTAAAAAAGCTGTCTAG ACCCGGAGAGGTGGAGCGGGCCTCCAAAGAGATGAGGACCTGGAAACGTT CCACAAGGAGGACAGTATGGCGCAGTCCACCCCTGTCATCGTCCCGAAGG AAGCATCCGCTGAGCAACAGGAGCAGCAAGAGCAAACTCTCTCTCCGGAG ATAGTAAAAAAGCTGTCTAGACCCGGAGAGGTGGAGCGGGCCTCCAAAGA GATGAGATCTGTCATGACGATTCTGGCCGCGGTCTACCGGCGCATGAGGC CAAACGATCCCCGAGACTTCGTGCAAGACTCTTGGGCCTCGGGGAGACGC ACCTCCCTTCGACGTACCAGCTTCAACTCGTACTAAATCTGTCATGACGA TTCTGGCCGCGGTCTACCGGCGCATGAGGCCAAACGATCCCCGAGACTTC GTGCAAGACTCTTGGGCCTCGGGGAGACGCACCTCCCTTCGACGTACCAG CTTCAACTCGTACTAA back to top
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