mRNA_E-fasciculatus_F_contig101.114.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig101.114.1 vs. uniprot
Match: D8LF22_ECTSI (Amine oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF22_ECTSI) HSP 1 Score: 145 bits (366), Expect = 4.210e-40 Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 1 Query: 1 YVEGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTNTPTGTTVHAAIDSGDR 201 YV GLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTNTPTGTTVHAAIDSGDR Sbjct: 371 YVGGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTNTPTGTTVHAAIDSGDR 437
BLAST of mRNA_E-fasciculatus_F_contig101.114.1 vs. uniprot
Match: A0A6H5JVR3_9PHAE (PAO protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVR3_9PHAE) HSP 1 Score: 142 bits (359), Expect = 1.180e-38 Identity = 64/67 (95.52%), Postives = 65/67 (97.01%), Query Frame = 1 Query: 1 YVEGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTNTPTGTTVHAAIDSGDR 201 YV GLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAAS+NGTLFFAGEHTNTPTG TVHAAIDSGDR Sbjct: 472 YVGGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASINGTLFFAGEHTNTPTGMTVHAAIDSGDR 538
BLAST of mRNA_E-fasciculatus_F_contig101.114.1 vs. uniprot
Match: A0A484DUS0_BRELC (Amino_oxidase domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DUS0_BRELC) HSP 1 Score: 71.2 bits (173), Expect = 7.350e-13 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 1 YVEGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTN-TPTGTTVHAAIDSGDR 201 +V+G DW DEP++RGGY YPR+G +T LAA VN LFFAGE T G +VHAA+D+G R Sbjct: 406 FVKGTYKDW-GDEPWIRGGYAYPRVGQSDTASKDLAAPVNNRLFFAGEATAYEQPGMSVHAAVDTGTR 472
BLAST of mRNA_E-fasciculatus_F_contig101.114.1 vs. uniprot
Match: W2NUE5_PHYPR (Amino_oxidase domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2NUE5_PHYPR) HSP 1 Score: 69.3 bits (168), Expect = 3.500e-12 Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 1 Query: 1 YVEGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTN-TPTGTTVHAAIDSGDR 201 +V+G DW DEP++RGGY YPR+G +T LAA V+G +FFAGE T G +VH+A+D+G R Sbjct: 402 FVKGTYKDW-GDEPWIRGGYAYPRVGQSDTASYDLAAPVDGRIFFAGEATAFEQPGMSVHSAVDTGTR 468
BLAST of mRNA_E-fasciculatus_F_contig101.114.1 vs. uniprot
Match: D0MQX8_PHYIT (Amino_oxidase domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MQX8_PHYIT) HSP 1 Score: 68.9 bits (167), Expect = 4.130e-12 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 1 YVEGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTN-TPTGTTVHAAIDSGDR 201 YV+G DW DEP++RGGY +PR+G +T LAA V G +FFAGE T G +VHAA+D+G R Sbjct: 281 YVKGTYKDW-GDEPWIRGGYAFPRVGQSDTASYDLAAPVAGRIFFAGEATAFEQPGMSVHAAVDTGAR 347
BLAST of mRNA_E-fasciculatus_F_contig101.114.1 vs. uniprot
Match: A0A0P1AT21_PLAHL (Amine oxidase-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AT21_PLAHL) HSP 1 Score: 67.0 bits (162), Expect = 2.230e-11 Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 1 Query: 1 YVEGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTN-TPTGTTVHAAIDSGDR 201 +V+G+ DW DEP++ GGY YPR+G ++ + LAA V+ LFFAGE T G +VHAA+D+G R Sbjct: 340 FVKGIYKDW-GDEPWICGGYAYPRVGQSDSASSELAAPVDNRLFFAGEATAFEQPGMSVHAAVDTGTR 406
BLAST of mRNA_E-fasciculatus_F_contig101.114.1 vs. uniprot
Match: G4ZPG5_PHYSP (Amino_oxidase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZPG5_PHYSP) HSP 1 Score: 65.9 bits (159), Expect = 5.320e-11 Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 1 YVEGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTN-TPTGTTVHAAIDSGDR 201 +V G+ DW DEP++ GGY +PR+G +T LAA V+ +FFAGE T G +VHAAID+G R Sbjct: 286 FVRGMYKDW-GDEPWIGGGYAFPRVGQSDTASQDLAAPVDNRIFFAGEATAFEQPGMSVHAAIDTGSR 352
BLAST of mRNA_E-fasciculatus_F_contig101.114.1 vs. uniprot
Match: A0A6A3LZZ9_9STRA (Amino_oxidase domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LZZ9_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 7.980e-11 Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 1 YVEGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTN-TPTGTTVHAAIDSGDR 201 +V G+ DW DEP++ GGY +PR+G +T LAA V+ +FFAGE T G +VHAAID+G R Sbjct: 404 FVRGMYKDW-GDEPWIGGGYAFPRVGQSDTASQDLAAPVDNRIFFAGEATAFEQPGMSVHAAIDTGTR 470
BLAST of mRNA_E-fasciculatus_F_contig101.114.1 vs. uniprot
Match: A0A3M6VMM2_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VMM2_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.190e-8 Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 1 YVEGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTN-TPTGTTVHAAIDSGDR 201 +V+G D+ DEP++ GGY +PR+G ++ LAA+V+ +FFAGE T G +VHAA+D+G R Sbjct: 402 FVKGTYKDF-GDEPWIGGGYAFPRVGQSDSASEDLAAAVDNRVFFAGEATAFEQPGMSVHAAVDTGTR 468
BLAST of mRNA_E-fasciculatus_F_contig101.114.1 vs. uniprot
Match: M4B442_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B442_HYAAE) HSP 1 Score: 58.2 bits (139), Expect = 3.020e-8 Identity = 29/68 (42.65%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 1 YVEGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTN-TPTGTTVHAAIDSGDR 201 +V+G+ D+ +EP++ GGY +PR+G ++ LAA V+ +FFAGE T G +VHAA+D+G R Sbjct: 377 FVKGMYKDF-GNEPWIGGGYAFPRVGQSDSASQDLAAPVDNRIFFAGEATAYEQPGMSVHAAVDTGTR 443 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig101.114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 24 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig101.114.1 >prot_E-fasciculatus_F_contig101.114.1 ID=prot_E-fasciculatus_F_contig101.114.1|Name=mRNA_E-fasciculatus_F_contig101.114.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=68bp YVEGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTback to top mRNA from alignment at E-fasciculatus_F_contig101:40170..40373- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig101.114.1 ID=mRNA_E-fasciculatus_F_contig101.114.1|Name=mRNA_E-fasciculatus_F_contig101.114.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=204bp|location=Sequence derived from alignment at E-fasciculatus_F_contig101:40170..40373- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig101:40170..40373- >mRNA_E-fasciculatus_F_contig101.114.1 ID=mRNA_E-fasciculatus_F_contig101.114.1|Name=mRNA_E-fasciculatus_F_contig101.114.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=408bp|location=Sequence derived from alignment at E-fasciculatus_F_contig101:40170..40373- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |