mRNA_E-fasciculatus_F_contig10091.97.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: D7FUE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE6_ECTSI) HSP 1 Score: 397 bits (1019), Expect = 2.140e-130 Identity = 209/253 (82.61%), Postives = 222/253 (87.75%), Query Frame = 1 Query: 1 SVIEVTVSDGERTILIDGESYAND-GGDFPATMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETIDTGSASVTEGYNYCTSNWQAEVSLLSSPS---GRRLQTSTDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGDVCEENTFSSDGLPPCTNCPEGETSGRGAIVCEELSTPSPTVVQAPTPHPTPS 747 SVIEVTVSDGERTILIDGE+YA D G D PATMTGV LTVTDQNVDMLFPSGLQVNARRWFTD YIGGVYVYAPL M TVGVLGTNNGN ADDWTDS+GETID GSASV EGYNYCTSNW+AE SLL++ S RRLQTS +Y APVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEA +EFE EV AAGGDVCEEN FSSDGL PCT+CP+GETSGRGA+VCE +STPSPTVV+ P PTP+ Sbjct: 268 SVIEVTVSDGERTILIDGEAYAYDEGDDLPATMTGVALTVTDQNVDMLFPSGLQVNARRWFTDPNYIGGVYVYAPLDMPTVGVLGTNNGNRADDWTDSSGETIDAGSASVAEGYNYCTSNWEAEESLLTTSSRLRSRRLQTS--DYVAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEAGEEFETEVQAAGGDVCEENAFSSDGLSPCTDCPDGETSGRGAVVCEAVSTPSPTVVEEP---PTPN 515
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: D7FTD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD8_ECTSI) HSP 1 Score: 372 bits (954), Expect = 5.780e-125 Identity = 192/234 (82.05%), Postives = 204/234 (87.18%), Query Frame = 1 Query: 1 SVIEVTVSDGERTILIDGESYA-NDGGDFPATMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETIDTGSASVTEGYNYCTSNWQAEVSLLSSPS----GRRLQTSTDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGDVCEENTFSSDGLPPCTNCPEGETSGRGAIVCE 687 SVIEVTVS GERTILIDGE+YA +G D PATMTGV LTVTDQNVDM FPSGLQVNARRWFTD YIGGVYVYAPL MSTVGVLGTNNGN DDWTDSTGETI+ GSAS+ EGYNYCTSNW+AE SLL++PS R LQTS +YTA VIPD IPTDVEELCGDNTECIFDAIV GLDVGAATLEA++EF EV AAGGDVCEENTFSSDGL PCT+CPEGETSGRGA+VCE Sbjct: 66 SVIEVTVSGGERTILIDGEAYAYGEGDDLPATMTGVALTVTDQNVDMWFPSGLQVNARRWFTDPNYIGGVYVYAPLDMSTVGVLGTNNGNRVDDWTDSTGETIEQGSASIAEGYNYCTSNWEAEESLLTTPSRRLRSRHLQTS--DYTALVIPDAIPTDVEELCGDNTECIFDAIVAGLDVGAATLEAAEEFHTEVQAAGGDVCEENTFSSDGLSPCTDCPEGETSGRGAVVCE 297
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI) HSP 1 Score: 346 bits (887), Expect = 1.070e-109 Identity = 189/245 (77.14%), Postives = 194/245 (79.18%), Query Frame = 1 Query: 1 SVIEVTVSDGERTILIDGESYANDGGDFPATMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETIDTGSASVTEGYNYCTSNWQAEVSLLSSPSGR--RLQTSTDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGDVCEENTFSSDGLPPCTNCPEGETSGRGAIVCEELSTPSPTVVQAPT 729 SVIEVTV+DGERTILIDGE YA +GGDFP TMTGVTLTVTDQNVDMLFPSGLQVNARRWFTD YIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETI TG+AS+ EGYNYCTSNWQ EVSLLSSPS R RLQTS D+YTAPVIPDVIPTDVEELC DNTECIFDAIVVGLDVGAATLEA DEFE EV AAGG EL TPSPTVVQ PT Sbjct: 262 SVIEVTVNDGERTILIDGEPYAYEGGDFPETMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDPNYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETIGTGAASIAEGYNYCTSNWQPEVSLLSSPSRRLRRLQTSVDDYTAPVIPDVIPTDVEELCRDNTECIFDAIVVGLDVGAATLEAGDEFETEVEAAGG---------------------------------ELPTPSPTVVQDPT 473
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: A0A6H5JLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE) HSP 1 Score: 172 bits (435), Expect = 3.370e-45 Identity = 106/244 (43.44%), Postives = 141/244 (57.79%), Query Frame = 1 Query: 1 SVIEVT-VSDGERTILIDGESYANDGGDFPATMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETIDTGSA--SVTEGYNYCTSNW--QAEVSLLSSPSGRRLQT---STDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAG-GDVCEENTFSSDGLPPCTNCPEGETSGRGAIVCEELSTPS 705 SVI+ T + G + +DGE Y G T+TGV L + + V+M+FPSG++V ++ I Y PL ++T G+LG NNGN+ DDW + E ++ S +V EG NYCT+NW + S+ + G T Y APV+PDVIP V ELCGDNT C+FDA++ G +VG ATL+ +E A V G G +C NTFSS G PPCT+CP GE SGRGA VC P+ Sbjct: 563 SVIQATSTASGGLEVWVDGELYDEAAG---TTLTGVALELLEARVEMIFPSGMEVIVLSRTGGILRIDA---YVPLDLATTGLLGNNNGNIGDDWRTADNEIVEFASEHPTVAEGTNYCTTNWCTTEDSSIFTYAEGEDHGTYDLCDVVYVAPVLPDVIPAAVTELCGDNTNCVFDALLAGEEVGEATLK--EEEAARVYQEGLGGLCTTNTFSSTGTPPCTDCPAGEVSGRGAKVCVPQGVPA 798
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: D8LQX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX7_ECTSI) HSP 1 Score: 166 bits (421), Expect = 1.390e-43 Identity = 103/237 (43.46%), Postives = 135/237 (56.96%), Query Frame = 1 Query: 1 SVIEVTVS-DGERTILIDGESYANDGGDFPAT-MTGVTLTVTDQNVDMLFPSGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETID--TGSASVTEGYNYCTSNW--QAEVSLLSSPSGRRLQT---STDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGDVCEENTFSSDGLPPCTNCPEGETSGRGAIVC 684 S+I+VT + G +L+DGE Y D AT + GV L VT V++ F SGL V ++ + YAP++++T G+LG NNG + DD+T GET+ T S +V EG NYCT+NW A+ SL + G T Y APV+PD IP + ELCGDN +CI DA++ G +VG ATLE E A G +C N+FSS G PPCT CP+GE SG GA C Sbjct: 424 SLIQVTTAASGGVEVLVDGELY-----DASATSVIGVALEVTSSRVEISFESGLDVFVSTSINGMLRVNA---YAPVSLATTGLLGNNNGELGDDFTTVDGETVGFATASPTVEEGTNYCTTNWCTTADASLFTYAEGEDHGTFDLCDAVYAAPVLPDAIPASITELCGDNADCIIDALLAGEEVGQATLEGQAEDRAYQEEVAG-LCASNSFSSTGAPPCTTCPDGEVSGTGATAC 651
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: D7G3X5_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X5_ECTSI) HSP 1 Score: 157 bits (397), Expect = 5.350e-41 Identity = 99/240 (41.25%), Postives = 134/240 (55.83%), Query Frame = 1 Query: 1 SVIEVTVS-DGERTILIDGESYANDGGDFPATMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETID--TGSASVTEGYNYCTSNW--QAEVSLLSSPSGRRLQT---STDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDE---FEAEVGAAGGDVCEENT-FSSDGLPPCTNCPEGETSGRGAIVC 684 S+I+VT + G +L+DGE Y +++ G+ L VT V++ F SGL V ++ + YAP++++T G+LG NNG + DD+T GET+ T S +V EG NYCT+NW A+ SL + G T Y APV+PD IP + ELCGDN +CI DA++ G +VG ATLE E ++ EV VC FSS G PPCT CP+GE SG GA C Sbjct: 69 SLIQVTTAASGGVEVLVDGELYDASA----SSVIGIALEVTSSRVEISFESGLDVFVSTSINGMLRVNA---YAPVSLATTGLLGNNNGELGDDFTTVDGETVGFATASPTVEEGTNYCTTNWCTTADASLFTYAEGEDHGTFDLCDAVYAAPVLPDTIPASITELCGDNADCIIDALLAGEEVGQATLEGQAEDRAYQEEV------VCARAILFSSTGAPPCTTCPDGEVSGTGATAC 295
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: D7G5D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D6_ECTSI) HSP 1 Score: 143 bits (361), Expect = 1.310e-36 Identity = 80/167 (47.90%), Postives = 101/167 (60.48%), Query Frame = 1 Query: 205 VYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETID--TGSASVTEGYNYCTSNW--QAEVSLLSSPSGRRLQT---STDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGDVCEENTFSSDGLPPCTNCPEGETSGRGAIVC 684 V YAP++++T G+LG NNG + DD+T GET+ T S +V EG NYCT+NW A+ SL + G T Y APV+PD IP + ELCGDN +CI DA++ G +VG ATLE E A G +C N+FSS G PPCT CP+GE SG GA C Sbjct: 4 VNAYAPVSLATTGLLGNNNGELGDDFTTVDGETVGFATASPTVEEGTNYCTTNWCTTADASLFTYAEGEDHGTFDLCDAVYAAPVLPDTIPASITELCGDNADCIIDALLAGEEVGQATLEGQAEDRAYQEEVAG-LCASNSFSSTGAPPCTTCPDGEVSGTGATAC 169
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: A0A1Z5KFB0_FISSO (VWFD domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFB0_FISSO) HSP 1 Score: 60.1 bits (144), Expect = 1.010e-6 Identity = 61/206 (29.61%), Postives = 94/206 (45.63%), Query Frame = 1 Query: 46 IDG-ESYANDGGDFPATMTGVTLTVTDQNVDMLFP-SGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETI---DTGSASVTE-GYNYCTSNW---QAEVSLL---------------SSPSGRRLQTSTDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGD 591 +DG + N G PA V +T N+++L+ S ++V + + YI V Y P + VG+LG+ +GN A+DWT TG + D+ A + + GY+YCT NW E SL + P G ++ ++ A ++ E CG N +CI DA + GL+ ATL + A AGG+ Sbjct: 235 VDGVQRDLNAGSGNPA----VQVTYKGPNIEVLYTKSKMKVTVNIGWAEGCYIN-VCAYVPNTDTMVGLLGSADGNNANDWTTPTGTILPIPDSLQARMGKAGYDYCTKNWCIRNEEDSLFVHAENGVEFSDLMKCNLPFGDTMEEYLEKVDASIL---------EFCGRNLQCITDAQLSGLESAKATLTSQAALAATCNTAGGE 426 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 8 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10091.97.1 >prot_E-fasciculatus_F_contig10091.97.1 ID=prot_E-fasciculatus_F_contig10091.97.1|Name=mRNA_E-fasciculatus_F_contig10091.97.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=252bp SVIEVTVSDGERTILIDGESYANDGGDFPATMTGVTLTVTDQNVDMLFPSback to top mRNA from alignment at E-fasciculatus_F_contig10091:2439..5038+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10091.97.1 ID=mRNA_E-fasciculatus_F_contig10091.97.1|Name=mRNA_E-fasciculatus_F_contig10091.97.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2600bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10091:2439..5038+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10091:2439..5038+ >mRNA_E-fasciculatus_F_contig10091.97.1 ID=mRNA_E-fasciculatus_F_contig10091.97.1|Name=mRNA_E-fasciculatus_F_contig10091.97.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1512bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10091:2439..5038+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |