mRNA_E-fasciculatus_F_contig1009.94.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1009.94.1 vs. uniprot
Match: D7G732_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G732_ECTSI) HSP 1 Score: 2548 bits (6605), Expect = 0.000e+0 Identity = 1452/1692 (85.82%), Postives = 1496/1692 (88.42%), Query Frame = 1 Query: 1 MVVYTIVVAALWVLALLEPQVGIDAAVCNGEIVTDPVSLRDPTGWDSQDSIGGAGQRRQGHVSAEVTAWGQKHAVVFGGTSVRTDDVNDVVGREAGVFVMDITNPANWTELEMVAYDGAPHAVFRPASFVWDNSLFVVCGHTEEPFTVTTEIWRADIQGFDEAPEGLWRFVNASKTDALGGQVSDVPRYGHTATVLNTGDPNPTEAWAIVIGGMTGSQNSVDTNLILHLSESSDEFVCNEDALVNITSSYTCDQRTPTRPTETEGEWLYLDSRLSNDSKPATRSYHAVASLASNGLGGSACLYMYGGRNYEMSILYSDLWSLCPASNYLGNSEDTTFTWTELSPAGTLPLGRYGAVFVAGIKDAPYRILLYGGTGRYPNSYMADEFTKEYDTYLNAWADSTLEDGSSTYPVGRRDHTLEGVGDFLVLIAGITNDEEALQDMWNVNFSSDCPAGTSTTNYVGTASVDGCLSCEAGT--------------------------------------------------------------------------FSLTGALECSPXXXXXXXXXXXXXXXXXXXXXXRHENSTLGYCSDCAAGTYAPFEQTTACXXXXXXXXXXXXXXXXXXXXXAGTAGASVASGPLADXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTDGASSDSVCQTCLSGTFAGVGSSXXXXXXXXXXSTLDGAETCDLCPVGTYVDVTGSTSIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLEGGGXXXXXXXXXXXXYEAAQEMNCTQCVGGFFADTIGSDVCTECPEEQLSYGAHEMCLACITNTSCPIGPNGETCSGVGDCYLGVCDCSTGFDSVDCSSGTCNGCGGVFGFDYDSAVVGTAESGGTVSLTLVRLVGTDGEITVDLDITAGNATEVSDFGGTWPTQVVFSDGQTESVVSLPIVHDNDPDEGCEGVTIGVTAVSGTGSAVVHGGIHDVSAEAVVTIEEDDFTSAVRTTALPVGLGVGGGGLSPATAEVVIADATATWSSDVTLSVVGVTPTNRSAALPLDVLFLAESHSTVTTDLERLVELLPGLVAEMQSSYSSVMIGLAAFTTTASSYDFQVLAQMMLNLYPVVGALDTLATSSLSASESAPGAQVVGLYEAADDATNDVGWRGDEDGDSFRVAAVVTGSHFAEEAGFDSSDTGTWTIPNGVTVSELQLRLSSAGVHPIFLLTDSSLEDEYTALVEEIGFGAVVAVDETAAAANNYNEDYLPRALSDGLEALFSQAALLIQSDDGGFVASTTPEPDAFRSVAAGTEVAFAVDMSATVASDTGSGEVTLSFQGHKTVITVLREYSSCAAISRSRVTGAAAAAADDARAGWLQRFHTDETSKWTFDSGFSLGNETLGPFGVTADVLAVSCPGGCSDQEAYQDIAMTVDSELPMVVKAYFYLSALSTATVASVSLDVTYTSGGQSVETEGFGLVDFVASSATSGTWTQGIEAVYPTKVITNARVKISFSGTGEAVFTGVALFAHPDVACRCEAGYYLDVNSAPARACTPKPECTYFQGWCTYCPAGYKCPQGGVLTACLDGEYSMGGYIECLPCPVGWLCSQGLGVPCGYGTVQASITTNAQEEEGSTSSVAGTYGGSCISCPAGMECPGGGVFQEXXXXXXXXXXXXSNMCLPCFPGSFANDTAAAECDDCPA 4854
MVV TI VAALWVLALLEPQVGIDAAVC+GE VTDPVSLRDPTGWDSQDSIGGAGQRRQGHVSAEVTAW QKHAVVFGGTSVRTDDVNDVVGREAGVFV+DITNPANWTELEMVAYDGAPHAVFRPASFVWDNSLFVVCGHTEEPFTVTTEIWRADIQGF+EAPEGLWR +NASKTDALGGQV D+PRYGHTATVLNTG+ NPTEAWAIVIGGMTGSQNSVDTNLILHLSESSDEFVC+EDALVNITSSYTC QRTPTRPTETEGEWLYLDSRLSNDSKPA+RSYHAVASLASNGLGGSACLYMYGGRNYEMSILYSDLWSLCP SNYLGNSEDTTFTWTELSPAGTLPLGRYGAVFVAGIKDAP+RILLYGGTGRYPNSYMADEFTKEYDTY+NAW DS+LEDGSSTYPVGRRDHTLEGVGDFLVLIAGI NDEEALQDMWNVNFSS + + + + S C C GT FSLTGALEC XXXXXXXXXXXXXXXXXXXXXXR E+STLGYCSDCAAGTYAPFEQTTAC XXXXXXXXXXXXXXXXXXXXAGTAGASVASGPLADXXXXXXXXXXXXXXXXXXXXXXXXXXX DGASSD CQTCLSGTFAGVGSS XXXX STLDG+ETCDLCPVGTYVDVTGS SIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +EGGG YEAAQEMNCT+CVGGFFADTIGSD+CTECPEEQLSY AHE CLACITNTSCPIGPNGETCSGVGDCYLGVCDCSTGFDSVDCSSGTC+GCGGVFGFDYDSAVVGTAESGGTVSLTLVRLVGTDGE+TVDLD+T GNATEVSDFGGTWP QVVF DGQTES VSLP+VHDNDPDEGCEGVTIGVTAVSGTGSAVV+GGIHDVSAEAVVTIEEDDFTSAVR+T LP GLGVGGG LSPATAEVVIADATATWSSDVTLSVVGVTPTNRS ALPLDVLFLAESHSTV TDLERLVELLPGLVAEMQSSYSSVM+GLAAFTTTASSYDFQVLAQMMLNLYPVV ALDTLATSSL+ASESAPGAQVVGLYEAADDATNDVGWRGDEDGDSFR+AAVVTGSHFAEEAGFD+SDTGTWT+PNGVTVSELQ RLSSAGVHPIFLLTDSSLED YTALV+EIGFGAVVAVDET A ANNYNEDYLPRAL+ GLEALFSQAALL+QSDDGGFVASTTPEPDAFRSVAAGTEV FAVDMSATVASDTGSGEV LSFQGHKTVITVLREYSSCAA SRSRVTGAAAA AD+ARAGWLQRFHTDE SKWTFDSGFSLGNETLGPFGV+ADVLAVSCPGGCSDQEAYQDI + VDSELPMVVKAYFYLSALSTATVASVSLDVTY+SGGQSVE E FG +DFVASSATSGTWTQ IEAVYPTKVIT+ARVKISFSGTGEA FTGVALFAHPDVACRCEAGYYLDV SAP GGVLTACLDGEYSMGGYIECLPCPVGWLCSQGLGVPCGYGT + S+TTNAQEEEGSTSSVAGTYGGSCISCPAGMECPGGGVFQEXXXXXXXXXXXX MC+PCFPGSF NDTAAAEC+DCPA
Sbjct: 1 MVVCTIFVAALWVLALLEPQVGIDAAVCDGETVTDPVSLRDPTGWDSQDSIGGAGQRRQGHVSAEVTAWDQKHAVVFGGTSVRTDDVNDVVGREAGVFVVDITNPANWTELEMVAYDGAPHAVFRPASFVWDNSLFVVCGHTEEPFTVTTEIWRADIQGFEEAPEGLWRPINASKTDALGGQVYDIPRYGHTATVLNTGEANPTEAWAIVIGGMTGSQNSVDTNLILHLSESSDEFVCDEDALVNITSSYTCGQRTPTRPTETEGEWLYLDSRLSNDSKPASRSYHAVASLASNGLGGSACLYMYGGRNYEMSILYSDLWSLCPVSNYLGNSEDTTFTWTELSPAGTLPLGRYGAVFVAGIKDAPHRILLYGGTGRYPNSYMADEFTKEYDTYMNAWVDSSLEDGSSTYPVGRRDHTLEGVGDFLVLIAGINNDEEALQDMWNVNFSSPMCSSGNYMFFCESTSSPVCGVCPDGTATDRASYXXXXXXXXXXXXXXXXXXXXXXXXKYGNGDGGVVEATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSLTGALECXXXXXXXXXXXXXXXXXXXXXXXXRQEDSTLGYCSDCAAGTYAPFEQTTACLXXXXXXXXXXXXXXXXXXXXAGTAGASVASGPLADXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADGASSDGACQTCLSGTFAGVGSSSXXXXVAGQYSTLDGSETCDLCPVGTYVDVTGSMSIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGGGCQDCPRGEYTSTYEAAQEMNCTKCVGGFFADTIGSDLCTECPEEQLSYSAHETCLACITNTSCPIGPNGETCSGVGDCYLGVCDCSTGFDSVDCSSGTCDGCGGVFGFDYDSAVVGTAESGGTVSLTLVRLVGTDGEVTVDLDVTGGNATEVSDFGGTWPIQVVFDDGQTESAVSLPVVHDNDPDEGCEGVTIGVTAVSGTGSAVVNGGIHDVSAEAVVTIEEDDFTSAVRSTTLPTGLGVGGGELSPATAEVVIADATATWSSDVTLSVVGVTPTNRSTALPLDVLFLAESHSTVATDLERLVELLPGLVAEMQSSYSSVMLGLAAFTTTASSYDFQVLAQMMLNLYPVVVALDTLATSSLAASESAPGAQVVGLYEAADDATNDVGWRGDEDGDSFRIAAVVTGSHFAEEAGFDTSDTGTWTVPNGVTVSELQSRLSSAGVHPIFLLTDSSLEDAYTALVDEIGFGAVVAVDETDAVANNYNEDYLPRALAGGLEALFSQAALLVQSDDGGFVASTTPEPDAFRSVAAGTEVTFAVDMSATVASDTGSGEVILSFQGHKTVITVLREYSSCAATSRSRVTGAAAATADNARAGWLQRFHTDEPSKWTFDSGFSLGNETLGPFGVSADVLAVSCPGGCSDQEAYQDITVAVDSELPMVVKAYFYLSALSTATVASVSLDVTYSSGGQSVEVESFGFLDFVASSATSGTWTQDIEAVYPTKVITSARVKISFSGTGEAAFTGVALFAHPDVACRCEAGYYLDVASAP----------------------------GGVLTACLDGEYSMGGYIECLPCPVGWLCSQGLGVPCGYGTTRTSLTTNAQEEEGSTSSVAGTYGGSCISCPAGMECPGGGVFQEXXXXXXXXXXXXXXMCMPCFPGSFTNDTAAAECEDCPA 1664
BLAST of mRNA_E-fasciculatus_F_contig1009.94.1 vs. uniprot
Match: A0A8B7Z1I5_ACAPL (uncharacterized protein LOC110984001 isoform X1 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z1I5_ACAPL) HSP 1 Score: 64.7 bits (156), Expect = 2.110e-6 Identity = 37/114 (32.46%), Postives = 46/114 (40.35%), Query Frame = 1 Query: 4516 EYSMGGYIECLPCPVGWLCSQGLGVPCGYGTVQASITTNAQEEEGSTSSVAGTYGGSCISCPAGMECPGGGVFQEXXXXXXXXXXXXSNMCLPCFPGSFANDTAAAECDDCPAG 4857
E+S G +EC+PCP+GWLC G PC T+ E +C C G C G Q S C PC PG+F N T + C+ CPAG
Sbjct: 1858 EHSFGHALECVPCPIGWLCKDGYATPCPKYHHGRCNETHCPE--------------ACALCDPGTACFRG--IQSICPQGYFSQGFDSEFCQPCQPGTFNNLTGQSICEKCPAG 1955 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1009.94.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1009.94.1 >prot_E-fasciculatus_F_contig1009.94.1 ID=prot_E-fasciculatus_F_contig1009.94.1|Name=mRNA_E-fasciculatus_F_contig1009.94.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1626bp MVVYTIVVAALWVLALLEPQVGIDAAVCNGEIVTDPVSLRDPTGWDSQDSback to top mRNA from alignment at E-fasciculatus_F_contig1009:180..16512- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1009.94.1 ID=mRNA_E-fasciculatus_F_contig1009.94.1|Name=mRNA_E-fasciculatus_F_contig1009.94.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=16333bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1009:180..16512- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1009:180..16512- >mRNA_E-fasciculatus_F_contig1009.94.1 ID=mRNA_E-fasciculatus_F_contig1009.94.1|Name=mRNA_E-fasciculatus_F_contig1009.94.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=9756bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1009:180..16512- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |