mRNA_E-fasciculatus_F_contig10085.91.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10085.91.1 vs. uniprot
Match: D7FTB4_ECTSI (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB4_ECTSI) HSP 1 Score: 204 bits (518), Expect = 5.800e-59 Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 1 Query: 1 TQYFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPGVECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKKGVFVYRTIDDLE 291
T+YFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPGVECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKKGVFVYRTIDDLE
Sbjct: 54 TEYFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPGVECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKKGVFVYRTIDDLE 150
BLAST of mRNA_E-fasciculatus_F_contig10085.91.1 vs. uniprot
Match: A0A6H5L7C3_9PHAE (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7C3_9PHAE) HSP 1 Score: 201 bits (510), Expect = 4.480e-58 Identity = 94/97 (96.91%), Postives = 97/97 (100.00%), Query Frame = 1 Query: 1 TQYFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPGVECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKKGVFVYRTIDDLE 291
T+YFTNKDPDNLSMSGNYNDNGDGLT+WYQSTPGVECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKKGVFVYRTI+DLE
Sbjct: 38 TEYFTNKDPDNLSMSGNYNDNGDGLTQWYQSTPGVECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKKGVFVYRTINDLE 134
BLAST of mRNA_E-fasciculatus_F_contig10085.91.1 vs. uniprot
Match: A0A7R9W2K1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2K1_9STRA) HSP 1 Score: 123 bits (309), Expect = 2.260e-32 Identity = 61/97 (62.89%), Postives = 72/97 (74.23%), Query Frame = 1 Query: 1 TQYFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPGVECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKKGVFVYRTIDDLE 291
T YF + DP LSM+ ++D DG T WY+ GVE YVGDKA+ ID E+KTV+ ESGR I YD AVLATGS+PFVPP PG + GVFVYRTI+DLE
Sbjct: 115 TSYFESLDPSKLSMTSEFDD--DGRTSWYEEN-GVELYVGDKAVSIDTESKTVVGESGRTIPYDVAVLATGSFPFVPPIPGRHRPGVFVYRTIEDLE 208
BLAST of mRNA_E-fasciculatus_F_contig10085.91.1 vs. uniprot
Match: A0A835YW55_9STRA (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW55_9STRA) HSP 1 Score: 127 bits (318), Expect = 7.040e-32 Identity = 59/97 (60.82%), Postives = 75/97 (77.32%), Query Frame = 1 Query: 1 TQYFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPGVECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKKGVFVYRTIDDLE 291
T++F +D D+LSM+G Y G T+WY +T +E VGDKA ID+E KTV+S SG+ I YD AV+ATGS+PFVPPTPG++KKGVFVYRTI+DLE
Sbjct: 54 TEFFAKRDLDDLSMAGPYT--AAGTTDWYDTTDNIEVLVGDKATAIDKETKTVMSSSGKAIPYDVAVIATGSFPFVPPTPGINKKGVFVYRTIEDLE 148
BLAST of mRNA_E-fasciculatus_F_contig10085.91.1 vs. uniprot
Match: A0A7S2F8L4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8L4_9STRA) HSP 1 Score: 121 bits (304), Expect = 9.350e-31 Identity = 64/101 (63.37%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 1 TQYFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPG---VECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKK-GVFVYRTIDDLE 291
T+YF +++P ++SMSG Y DNG LT WY+ V +VGDKA KID E K VISE GRE++YD AVLATGSYPFVPP G DK GVFVYRTIDDLE
Sbjct: 113 TEYFKDRNPSSISMSGEYLDNG--LTAWYEDAIAAGKVAIHVGDKATKIDTEKKVVISEEGREVEYDVAVLATGSYPFVPPIKGSDKTPGVFVYRTIDDLE 211
BLAST of mRNA_E-fasciculatus_F_contig10085.91.1 vs. uniprot
Match: A0A7S2AW52_9STRA (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AW52_9STRA) HSP 1 Score: 121 bits (304), Expect = 5.480e-30 Identity = 64/101 (63.37%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 1 TQYFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPG---VECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKK-GVFVYRTIDDLE 291
T+YF +++P ++SMSG Y DNG LT WY+ V +VGDKA KID E K VISE GRE++YD AVLATGSYPFVPP G DK GVFVYRTIDDLE
Sbjct: 113 TEYFKDRNPSSISMSGEYLDNG--LTAWYEDAIAAGKVAIHVGDKATKIDTEKKVVISEEGREVEYDVAVLATGSYPFVPPIKGSDKTPGVFVYRTIDDLE 211
BLAST of mRNA_E-fasciculatus_F_contig10085.91.1 vs. uniprot
Match: A0A7S0Y7S5_9STRA (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y7S5_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.280e-28 Identity = 56/97 (57.73%), Postives = 69/97 (71.13%), Query Frame = 1 Query: 1 TQYFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPGVECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKKGVFVYRTIDDLE 291
T YF +DP LSM+ + D DG T WY+ VE Y+GDKA+ ID +AKTV +SG+ I+YD VLATGS+PFVPP PG + GVFVYRTI+DLE
Sbjct: 40 TSYFETRDPSELSMTSEFED--DGTTSWYKEN-NVELYIGDKAVAIDVDAKTVTGQSGKTIEYDACVLATGSFPFVPPIPGKQRPGVFVYRTIEDLE 133
BLAST of mRNA_E-fasciculatus_F_contig10085.91.1 vs. uniprot
Match: A0A6N9CBF1_9BACT (Nitrite reductase small subunit NirD n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A6N9CBF1_9BACT) HSP 1 Score: 115 bits (288), Expect = 7.880e-28 Identity = 54/97 (55.67%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 1 TQYFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPGVECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKKGVFVYRTIDDLE 291
TQ+FTN+DP+ L ++ T+WY+ G+ ++GDKA IDR+ + V SE+G+EI YD VLATGSYPFVPP PGVDK GVFVYRTI+DL+
Sbjct: 60 TQFFTNRDPEQLMLTN---------TQWYEEQ-GISLHIGDKATAIDRDLRVVRSENGKEIPYDTVVLATGSYPFVPPIPGVDKDGVFVYRTIEDLQ 146
BLAST of mRNA_E-fasciculatus_F_contig10085.91.1 vs. uniprot
Match: A0A448YYW5_9STRA (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYW5_9STRA) HSP 1 Score: 115 bits (288), Expect = 7.900e-28 Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 1 TQYFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPGVECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKKGVFVYRTIDDLE 291
T YF +DP LSM+ ++++NG T WY+ VE Y+GDKA+ ID +AKTV +SG+ I+YD VLATGS+PFVPP PG + GVFVYRTI+DLE
Sbjct: 91 TSYFETRDPSALSMTSDFDENG--ATSWYEEND-VELYIGDKAVAIDVDAKTVTGQSGKTIEYDACVLATGSFPFVPPIPGKQRPGVFVYRTIEDLE 184
BLAST of mRNA_E-fasciculatus_F_contig10085.91.1 vs. uniprot
Match: A0A1E7EL49_9STRA (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EL49_9STRA) HSP 1 Score: 112 bits (280), Expect = 9.480e-27 Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 1 TQYFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPGVECYVGDKALKIDREAKTVISESGREIKYDKAVLATGSYPFVPPTPGVDKKGVFVYRTIDDLE 291
T YF +DP L+M+ ++ + DG T WYQ VE ++GDKA++ID + K + ESG++I+YD VLATGS+PFVPP PG + GVFVYRTI+DLE
Sbjct: 38 TSYFETRDPSALTMTSDFEN--DGTTSWYQEN-NVELFIGDKAIEIDTQNKIITGESGKKIEYDACVLATGSFPFVPPIPGKQRPGVFVYRTIEDLE 131 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10085.91.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10085.91.1 >prot_E-fasciculatus_F_contig10085.91.1 ID=prot_E-fasciculatus_F_contig10085.91.1|Name=mRNA_E-fasciculatus_F_contig10085.91.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=100bp TQYFTNKDPDNLSMSGNYNDNGDGLTEWYQSTPGVECYVGDKALKIDREAback to top mRNA from alignment at E-fasciculatus_F_contig10085:248..1018- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10085.91.1 ID=mRNA_E-fasciculatus_F_contig10085.91.1|Name=mRNA_E-fasciculatus_F_contig10085.91.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=771bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10085:248..1018- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10085:248..1018- >mRNA_E-fasciculatus_F_contig10085.91.1 ID=mRNA_E-fasciculatus_F_contig10085.91.1|Name=mRNA_E-fasciculatus_F_contig10085.91.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=600bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10085:248..1018- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |