mRNA_E-fasciculatus_F_contig10078.85.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10078.85.1 vs. uniprot
Match: A0A6H5KVK9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVK9_9PHAE) HSP 1 Score: 400 bits (1028), Expect = 3.190e-134 Identity = 233/293 (79.52%), Postives = 239/293 (81.57%), Query Frame = 1 Query: 1 RLLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEIPNDSNFNYIRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWLVLAIMQQVEILLWIKFFPQPLMNASSPPEVKLPWLATLSLFSLWVLLFVAVREDPADATAAAASKGGGTGAL-------------AGGVTSASGSMSSMGSLLDGGNNGXGSVGDAAGGDGQGEKAGGVSGSGKPNSCGEGGGG-DDAGVDTKPRR----RGSRTKRKTAMLVAKWGAVDAVFILSFIPLLYLVKQWSY 825
RLLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEIPN+SNFNYIRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWL+LAIMQ VEILLWIKFFPQPLMNASSPPEVKLPWLATLSLFSLWVLLFVAVREDPADA AGGVTSAS SMSSMGSLLDGG++ X GQG K GGVS SGKP+ CGEG DDAGVDTKPRR SRTKRKTAMLVAKWGAVDAVFILSFIPLL+LVKQWSY
Sbjct: 291 RLLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEIPNNSNFNYIRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWLILAIMQ-VEILLWIKFFPQPLMNASSPPEVKLPWLATLSLFSLWVLLFVAVREDPADAAXXXXXXXXXXPXXXXXXXXXXXXXXPAGGVTSASESMSSMGSLLDGGSSXXXXXXXXX--XGQGYKTGGVSSSGKPDGCGEGXXXXDDAGVDTKPRRLNSLSASRTKRKTAMLVAKWGAVDAVFILSFIPLLFLVKQWSY 580
BLAST of mRNA_E-fasciculatus_F_contig10078.85.1 vs. uniprot
Match: A0A836CG66_9STRA (Phosphatidylserine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG66_9STRA) HSP 1 Score: 164 bits (414), Expect = 4.650e-43 Identity = 76/141 (53.90%), Postives = 100/141 (70.92%), Query Frame = 1 Query: 1 RLLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEIPNDSNFNYIRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWLVLAIMQQVEILLWIKFFPQPLMNASSPPEVKLPWLATLSLFSLWVLL 423
R + +FSP W KW W F++FKR Q+ +V T+ ELNAF+++NAL++P S +N +R+ +IFLV L A SEYYEY +N C+RLGQNAWL+LAI Q VE L WIKF PQ L++A PPEV+LP AT + +LW LL
Sbjct: 317 RAVLQFSPFSWRKWEWGTFTTFKRFCQILGIVIVTLATELNAFMMLNALDVPKTSMYNVVRLAIIFLVGLPAVSEYYEYITNARCSRLGQNAWLMLAIFQ-VETLTWIKFMPQSLLDAEYPPEVRLPHAATACMLALWALL 456
BLAST of mRNA_E-fasciculatus_F_contig10078.85.1 vs. uniprot
Match: W7T078_9STRA (Phosphatidylserine synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T078_9STRA) HSP 1 Score: 147 bits (370), Expect = 2.660e-38 Identity = 65/148 (43.92%), Postives = 108/148 (72.97%), Query Frame = 1 Query: 1 RLLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEIPNDSNFNYIRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWLVLAIMQQVEILLWIKFFPQPLMNASSPPEVKLPWLATLSLFSLWVLLFVAVRED 444
RL+ + SP ++++RW FSSFKR QV ++ T+L+ELNAF++++ L+IP +S FN IR++++ L+A A +EYY++ +NP +RLG NAW ++A+MQ +E+++W+KF+P + + PPE+ PWLATL L LW+LL + + ++
Sbjct: 110 RLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQ-LEVVVWLKFWPSTFLIRTPPPEIGYPWLATLLLLGLWMLLSLTLVKE 256
BLAST of mRNA_E-fasciculatus_F_contig10078.85.1 vs. uniprot
Match: I2CSE4_NANGC (Phosphatidylserine synthase 2 (Fragment) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=I2CSE4_NANGC) HSP 1 Score: 146 bits (369), Expect = 4.180e-37 Identity = 65/148 (43.92%), Postives = 107/148 (72.30%), Query Frame = 1 Query: 1 RLLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEIPNDSNFNYIRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWLVLAIMQQVEILLWIKFFPQPLMNASSPPEVKLPWLATLSLFSLWVLLFVAVRED 444
RL+ + SP ++++RW FSSFKR QV ++ T+L+ELNAF++++ L+IP +S FN IR++++ L+A A +EYY++ SNP +RLG N W ++A+MQ +E+++W+KF+P + + PPE+ PWLATL L LW+LL + + ++
Sbjct: 303 RLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFISNPYQSRLGPNVWCMMAVMQ-LEVVVWLKFWPSTFLIRTPPPEIGYPWLATLLLLGLWMLLSLTLVKE 449
BLAST of mRNA_E-fasciculatus_F_contig10078.85.1 vs. uniprot
Match: K3W6F1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6F1_GLOUD) HSP 1 Score: 140 bits (354), Expect = 3.430e-35 Identity = 63/142 (44.37%), Postives = 101/142 (71.13%), Query Frame = 1 Query: 4 LLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEIPNDSNFNYIRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWLVLAIMQQVEILLWIKFFPQPLMNASSPPEVKL-PWLATLSLFSLWVLLF 426
+L++F+P+ WS++ W+ FSSFKR AQ+ + +L+ELNAF ++N L IP +SNFN R++++FL+ + +EYYE+ SNP C RLGQNAW++L+I E+L+W+KF ++ +PP + L P LA ++FS+W++ F
Sbjct: 265 VLSQFTPISWSQYHWEVFSSFKRFAQIMFALFVCLLVELNAFFLLNTLSIPKESNFNAYRLSLVFLIGIPGAAEYYEFLSNPECQRLGQNAWMILSIAV-FEVLVWVKFSANGVLFNDAPPALVLYPILAFAAMFSIWMVCF 405
BLAST of mRNA_E-fasciculatus_F_contig10078.85.1 vs. uniprot
Match: A0A067CA10_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CA10_SAPPC) HSP 1 Score: 140 bits (353), Expect = 4.770e-35 Identity = 70/153 (45.75%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 1 RLLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEIPNDSNFNYIRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWLVLAIMQQVEILLWIKFFPQPLMNASSPPEVKLPWLATLSLFSLWVLLFVAVREDPADAT 459
R L++F+P WS++ W+ FSSFKR A V V +L+ELNAF +++ L IP +S+ N R+ +IF++ L A SEY+E+ +NPAC RLGQNAW++ +I E+L+W+KF ++ PP+V LP LA +LFSLW+LLF + R+ +T
Sbjct: 278 RALSQFTPFSWSRYDWEVFSSFKRFALVAVAVFVCLLVELNAFFLLSTLNIPKESHINKYRLGLIFMLGLPAASEYFEFVTNPACWRLGQNAWMMCSI-GVFEVLVWVKFADGLAGTSTPPPDVYLPLLAFSALFSLWMLLFFSQRKTDKPST 429
BLAST of mRNA_E-fasciculatus_F_contig10078.85.1 vs. uniprot
Match: A0A5D6XXF1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXF1_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.470e-34 Identity = 65/142 (45.77%), Postives = 99/142 (69.72%), Query Frame = 1 Query: 4 LLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEIPNDSNFNYIRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWLVLAIMQQVEILLWIKFFPQPLMNASSPPE-VKLPWLATLSLFSLWVLLF 426
+L++F+P+ WS++ W+ FSSFKR AQV + +L+ELNAF ++N L IP +SNFN R+ ++FL+ + +EYYE+ SNP RLGQNAW++L++ E+L+W+KF ++ A +PP V LP LA + +FS+WV F
Sbjct: 301 VLSQFTPISWSQYHWEVFSSFKRFAQVMFALFVCLLVELNAFFLLNTLSIPKESNFNAYRLALMFLIGIPGAAEYYEFLSNPEALRLGQNAWMILSVAS-FEVLVWVKFSANGVLFADAPPALVALPILAFVCMFSVWVACF 441
BLAST of mRNA_E-fasciculatus_F_contig10078.85.1 vs. uniprot
Match: A0A2D4BLI8_PYTIN (Phosphatidylserine synthase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLI8_PYTIN) HSP 1 Score: 140 bits (354), Expect = 1.480e-34 Identity = 68/144 (47.22%), Postives = 97/144 (67.36%), Query Frame = 1 Query: 1 RLLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEIPNDSNFNYIRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWLVLAIMQQVEILLWIKFFPQPLMNASSPPEVKLPWLATLSLFSLWVLLFVA 432
R L +F+PL W ++ W+ FSSF R AQV + +++ELNAF ++N L IP +SNFN R+T++FL+ + +EYYE+ SNP C RLGQNAW++L+I E+L+W KF L P EV +P LA L +F++W+LLF A
Sbjct: 356 RALNQFTPLSWMQYHWEVFSSFSRFAQVMFCLVVCLVVELNAFFLLNTLSIPKESNFNAYRLTLMFLIGIPGAAEYYEFLSNPDCWRLGQNAWMILSIAV-FEVLVWFKFSGGILFTELPPLEVAVPILAFLVMFAVWMLLFFA 498
BLAST of mRNA_E-fasciculatus_F_contig10078.85.1 vs. uniprot
Match: A0A7S3UV09_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV09_HETAK) HSP 1 Score: 133 bits (334), Expect = 2.270e-33 Identity = 64/154 (41.56%), Postives = 95/154 (61.69%), Query Frame = 1 Query: 1 RLLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEIPNDSNFNYIRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWLVLAIMQQVEILLWIKFFPQPLMNASSPPEVKLP--WLATLSLFSLWVLLFVAV-REDPAD 453
R L +F PL WS+W W+A SFKR QV +V T+ ELNAF+ +NA+++P +S N R+ ++ V + A EYYEY +NP RLGQN W+ ++Q +E ++W KF Q M+ P V + W+ +L LF+ W LLF ++ + DPA+
Sbjct: 104 RALGRFYPLSWSRWEWEALGSFKRFTQVLVLVLLTLAAELNAFMFLNAMDVPKESRLNAARLLLVAAVGVPAAHEYYEYVTNPVSGRLGQNMWVFFGMIQ-LEWMMWAKFANQSFMDHMEAPPVDITCIWVLSLGLFATWALLFFSLSKPDPAE 256
BLAST of mRNA_E-fasciculatus_F_contig10078.85.1 vs. uniprot
Match: A0A1V9Z169_9STRA (Phosphatidylserine synthase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z169_9STRA) HSP 1 Score: 134 bits (338), Expect = 6.590e-33 Identity = 70/145 (48.28%), Postives = 101/145 (69.66%), Query Frame = 1 Query: 1 RLLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEIPNDSNFNYIRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWLVLAIMQQVEILLWIKFFPQPLMNASSPP-EVKLPWLATLSLFSLWVLLFVA 432
R L++F+P WS++ W+ FSSFKR A V V +L+ELNAF +++ L IP +S+ N R+ ++F++ L A SEYYE+ +NPAC RLGQNAW++ +I E+L+W+KF L+ AS+PP +V LP LA LF LW++LF A
Sbjct: 278 RALSQFTPFSWSRYDWEVFSSFKRFALVAGAVFVCLLVELNAFFLLSTLNIPKESHINKYRLCLLFMLGLPAASEYYEFITNPACWRLGQNAWMMCSI-GVFEVLVWVKF-ADGLVGASTPPADVYLPLLAFGFLFLLWMVLFFA 420 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10078.85.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10078.85.1 >prot_E-fasciculatus_F_contig10078.85.1 ID=prot_E-fasciculatus_F_contig10078.85.1|Name=mRNA_E-fasciculatus_F_contig10078.85.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=276bp RLLAKFSPLGWSKWRWQAFSSFKRTAQVFSMVAATMLLELNAFLVMNALEback to top mRNA from alignment at E-fasciculatus_F_contig10078:171..2739+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10078.85.1 ID=mRNA_E-fasciculatus_F_contig10078.85.1|Name=mRNA_E-fasciculatus_F_contig10078.85.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2569bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10078:171..2739+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10078:171..2739+ >mRNA_E-fasciculatus_F_contig10078.85.1 ID=mRNA_E-fasciculatus_F_contig10078.85.1|Name=mRNA_E-fasciculatus_F_contig10078.85.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1656bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10078:171..2739+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |