mRNA_E-fasciculatus_F_contig10063.74.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10063.74.1 vs. uniprot
Match: D7G2A4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A4_ECTSI) HSP 1 Score: 410 bits (1053), Expect = 1.120e-143 Identity = 215/225 (95.56%), Postives = 218/225 (96.89%), Query Frame = 1 Query: 82 MCTGIILLNRRKLDKYEGEPRVTQHIVEMDSNIATAAVPLLRDAEVAACFVTMGVGKPSK-----ATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRLTGTSAGGGLYLGVKGKVENNFEAVGLESAAFFRPSTLIGNANTPSAAASIHKMVSWALPLKFKEIHIEDVGKAMVRAAVDSLENKGPAVARYEGASLFGLLEDKPAAAAPGSS 741 MCTGI+LLNRRKLDKYEGEPRVTQHIVEMDSNIATAAVPLLRDA VAACFVTMGVGKPSK ATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSR+TGT+AGGGLYLGVKGKVENNFEAVGLESAAFFRP TLIGNANTPSAAASIHKMVSWALPLKFKEIHIEDVGKAMVRAAVDSLENKGPAVARYEGASLFGLLEDKPAAAAPGSS Sbjct: 1 MCTGIVLLNRRKLDKYEGEPRVTQHIVEMDSNIATAAVPLLRDAGVAACFVTMGVGKPSKVKSEQATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRITGTAAGGGLYLGVKGKVENNFEAVGLESAAFFRPCTLIGNANTPSAAASIHKMVSWALPLKFKEIHIEDVGKAMVRAAVDSLENKGPAVARYEGASLFGLLEDKPAAAAPGSS 225
BLAST of mRNA_E-fasciculatus_F_contig10063.74.1 vs. uniprot
Match: A0A6H5K5V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5V5_9PHAE) HSP 1 Score: 316 bits (809), Expect = 2.200e-107 Identity = 164/168 (97.62%), Postives = 166/168 (98.81%), Query Frame = 1 Query: 238 MGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRLTGTSAGGGLYLGVKGKVENNFEAVGLESAAFFRPSTLIGNANTPSAAASIHKMVSWALPLKFKEIHIEDVGKAMVRAAVDSLENKGPAVARYEGASLFGLLEDKPAAAAPGSS 741 MGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSR+TGT+AGGGLYLGVKGKVENNFEAVGLESAAFFRP TLIGNANTPSAAASIHKMVSWALPLKFKEIHIEDVGKAMVRAAVDSLENKGPAVARYEGASLFGLLEDKPAAA PGSS Sbjct: 1 MGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRITGTAAGGGLYLGVKGKVENNFEAVGLESAAFFRPCTLIGNANTPSAAASIHKMVSWALPLKFKEIHIEDVGKAMVRAAVDSLENKGPAVARYEGASLFGLLEDKPAAAVPGSS 168
BLAST of mRNA_E-fasciculatus_F_contig10063.74.1 vs. uniprot
Match: A0A7S0EJ53_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EJ53_9EUKA) HSP 1 Score: 167 bits (422), Expect = 1.850e-47 Identity = 108/238 (45.38%), Postives = 149/238 (62.61%), Query Frame = 1 Query: 16 AAVLGASGQVGGCVVASLL--AEPMCTGIILLNRRKLDKYEGEPRVTQHIVEMDSNIATAA---VPLLRDAEVAACFVTMGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRLTG---TSAGGGLYLGVKGKVENNFEAVGLESAAFFRPSTLIGNANTPSAAASIHKMVSWALPLKFKEIHIEDVGKAMVRAAVDSLE----NKGPAVARYEGASL 693 A VLG SG VG VVA+L A P + + + RR++ +++ P+VTQH+VEMD A +A L + +A F MGVG PSK+T EE ++D +P AFA A+K+AG VRH+S+L +VGAD AKP G TSAGGGLY +KGK+E+ E++G ESA+ FRP+TLIG NTP++ A + + LP K+K+ +I +G AMV+ A +L G V YEGA+L Sbjct: 13 AVVLGGSGAVGKEVVAALCKNATPWVS-VHVFGRRRIPEFDAFPKVTQHLVEMDDAAAASAGFATGLKEAGDASAAFNLMGVGTPSKSTEEELTRIDFAVPAAFASAAKAAG-VRHLSVLSAVGADKEAKPGGFLGFGKTSAGGGLYNMLKGKIEDKVESLGFESASTFRPATLIGTPNTPASIAWLSPKIDGLLPPKYKQTYINVLGAAMVQQAEHALAAPPAESGLRV--YEGAAL 246
BLAST of mRNA_E-fasciculatus_F_contig10063.74.1 vs. uniprot
Match: UPI000371E55D (NAD(P)H-binding protein n=1 Tax=Longispora albida TaxID=203523 RepID=UPI000371E55D) HSP 1 Score: 120 bits (302), Expect = 5.670e-30 Identity = 84/217 (38.71%), Postives = 118/217 (54.38%), Query Frame = 1 Query: 1 MGRFAAAVLGASGQVGGCVVASLLAEPMCTGIILLNRRKLDKYEGEPRVTQHIVEM-DSNIATAAVPLLRDAEVAACFVTMGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRLTGTSAGGGLYLGVKGKVENNFEAVGLESAAFFRPSTLIGNANTPSAA--------ASIHKMVSWALPLKFKEIHIEDVGKAM 624 MG + A V+G +G VG +V+ LLA P CT ++ L RR + EG +TQH+V++ D ATA A F T+G+G+PSK +R +F +VD+E P AFA+ +K+AG HISLL SVGA +++ YL VKG E A G + FRPS L TP + ++ VSWALP ++ EI + D+G+AM Sbjct: 1 MGTYRAVVVGGTGAVGSSLVSELLASPACTEVVSLGRRAGPEREG---LTQHVVDLRDLESATAEA----GAGCTVAFCTLGMGQPSKESRADFLRVDVEYPAAFARGAKAAGA-GHISLLSSVGASESSRA-----------FYLRVKGMAEAAMSAPGFGRVSLFRPSLL----TTPQSRYGWRDTVYQAVIPKVSWALPSQYHEISVADLGRAM 194
BLAST of mRNA_E-fasciculatus_F_contig10063.74.1 vs. uniprot
Match: A0A3D4X2D6_9ACTN (NAD(P)-bd_dom domain-containing protein n=2 Tax=Micromonosporaceae bacterium TaxID=1873464 RepID=A0A3D4X2D6_9ACTN) HSP 1 Score: 105 bits (263), Expect = 3.530e-24 Identity = 74/222 (33.33%), Postives = 112/222 (50.45%), Query Frame = 1 Query: 10 FAAAVLGASGQVGGCVVASLLAEPMCTGIILLNRRKLDKYEGEPRVTQHIVEMDSNIATAAVPLLRDAEVAACFVTMGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRLTGTSAGGGLYLGVKGKVENNFEAVGLESAAFFRPSTLIGNANTPSAAASIHKMV----SWALPLKFKEIHIEDVGKAM---VRAAVDSLEN 654 + A V+G++G VG ++ LLA P C ++ L RR + P++ QH+++M A A L F T+G G+PSK ++E+F ++D+E AFA K+ G V HISLL SVGAD ++ YL VKG E G + FRPS L+ +++ V SWALP ++ EI ++D+G+ M AA +E+ Sbjct: 8 YRAVVVGSTGAVGSELLRELLAAPRCESVVALVRRPIADA-ASPKLVQHVIDMADLEAETAKHALG---CTVAFSTLGAGQPSKLSKEDFWRIDVEYAKAFALGCKAVG-VEHISLLSSVGADLRSRTH-----------YLRVKGAAEQTLIDQGFRRTSLFRPSLLVTEQTRYGWTGKVYQTVIPKLSWALPKRWHEITVKDLGRTMRLNAEAAASGVEH 213
BLAST of mRNA_E-fasciculatus_F_contig10063.74.1 vs. uniprot
Match: A0A848VQ17_9BACT (NAD(P)H-binding protein n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A848VQ17_9BACT) HSP 1 Score: 92.8 bits (229), Expect = 3.130e-19 Identity = 71/212 (33.49%), Postives = 115/212 (54.25%), Query Frame = 1 Query: 25 LGASGQVGGCVVASLLAEPMCTGIILLNRRKLDKYEGEPRVTQHIVEMDSNIATAAVPLLRDAEVAACFVTMGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRLTGTSAGGGLYLGVKGKVENNFEAVGLESAAFFRPSTLIGNANTPSAAASIHKMVSWAL------PL-KFKEIHIEDVGKAMVRAAV 639 +GA+G VGG ASL P + L+ RR+ E +V QH+ ++ T+ +L+ + A C T+G+G+PSK +REEFE+VD + FA+A K+AG VRH +LL SVGADA G+S YL KG++E A+ + + FRPS ++ N + ++ ++ L PL KF+ + ++ +G+A+ + + Sbjct: 10 IGATGAVGGHASASLSTHPDVAKLTLIGRREATHLSSE-KVAQHVADLSD--PTSYREVLQGHDTAVC--TLGIGQPSKVSREEFERVDHDYVLDFAKACKAAG-VRHFALLSSVGADA--------GSS---NYYLRTKGRLEEELAALEFDRLSVFRPSMILTPTNRYGFSQAVALRLTPLLKPLLMGPLRKFRGVPVDLLGRAIAASVL 204
BLAST of mRNA_E-fasciculatus_F_contig10063.74.1 vs. uniprot
Match: UPI000367E4FA (NAD(P)H-binding protein n=1 Tax=Lewinella persica TaxID=70998 RepID=UPI000367E4FA) HSP 1 Score: 91.7 bits (226), Expect = 8.010e-19 Identity = 72/211 (34.12%), Postives = 109/211 (51.66%), Query Frame = 1 Query: 22 VLGASGQVGGCVVASLLAEPMCTGIILLNRRKLDKYEGEPRVTQHIVEMDSNIATAAVPLLRDAEVAACFVTMGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRLTGTSAGGGLYLGVKGKVENNFEAVGLESAAFFRPSTLIGNANTPSAAASIHKMVSWAL--------PLKFKEIHIEDVGKAMVR 630 +LGASG VGG + +LL +P I LL RR + + RVTQH V++ + + A L+ +VA C T+GVG+PSK ++EEFEK+D FA+A K AG V+H LL SVG D T+ YL +KG++ + + + + F+PS ++ N + + W + K+K + +ED+G AM R Sbjct: 8 MLGASGAVGGEALKTLLKDPRAEKITLLGRRGIPDMPAD-RVTQHKVDIFAPESYA--DLVTGHQVAIC--TLGVGEPSKISKEEFEKIDKLAVIDFAKACKVAG-VQHFELLSSVGIDPTSS-----------NYYLRMKGELVEALKELDFDRLSIFKPSMILTPTNRYGFVQGV-ALAIWPVLDKLFFGGARKYKGVKVEDLGSAMAR 200
BLAST of mRNA_E-fasciculatus_F_contig10063.74.1 vs. uniprot
Match: UPI000F8ECE50 (NAD(P)H-binding protein n=1 Tax=Pararhodobacter zhoushanensis TaxID=2479545 RepID=UPI000F8ECE50) HSP 1 Score: 85.5 bits (210), Expect = 5.210e-17 Identity = 64/177 (36.16%), Postives = 95/177 (53.67%), Query Frame = 1 Query: 22 VLGASGQVGGCVVASLLAEPMCTGIILLNRRKLDKYEGEPRVTQHIVEMDSNIATAAVPLLRDAEVAACFVTMGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRLTGTSAGGGLYLGVKGKVENNFEAVGLESAAFFRPSTLIGNANTPSAAASI 552 +LGASG VG + +L A P + LL+RR G +V + +V++ + AA L E A C T+GVG+PSKA+REEF +VD +IP AF QA + AG V H LL +VG+D+ SR+ Y KG++E+ +G + F PS ++ N A+ ++ Sbjct: 6 MLGASGAVGAAALRTLKAMPQVARVTLLSRRATGLAGG--KVAEQVVDVADPASYAAH--LVGHEAALC--TLGVGEPSKASREEFTRVDHDIPLAFGQACRDAG-VAHFGLLAAVGSDSG---SRI--------FYARTKGQLEDGLRGMGFARLSLFHPSMILTPQNRYGASQAL 164
BLAST of mRNA_E-fasciculatus_F_contig10063.74.1 vs. uniprot
Match: A0A356TQG7_9DELT (NAD(P)-bd_dom domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A356TQG7_9DELT) HSP 1 Score: 85.5 bits (210), Expect = 1.390e-16 Identity = 68/214 (31.78%), Postives = 105/214 (49.07%), Query Frame = 1 Query: 22 VLGASGQVGGCVVASLLAEPMCTGIILLNRRKLDKYEGEPRVTQHIVEMDSNIATAAVPLLRDAEVAACFVTMGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRLTGTSAGGGLYLGVKGKVENNFEAVGLESAAFFRPSTLIGNANTPSAAASIHKMVSWAL--PL------KFKEIHIEDVGKAMVRAAV 639 ++GA+G VGG LL P + LL RR + EG ++ QH+V++ + A L A C T+GVG+PSK TRE F +D AFA A + +G V H LL SVG +S YL KG++E+ EA+G + + F PS ++ N A+ ++ + W L P+ +F+ + +E +G+A+ V Sbjct: 1 MMGATGAVGGHAARRLLEMPGVERLTLLGRRPAEGLEGA-KLAQHVVDVSDPESYRAH--LAGHTTAVC--TLGVGEPSKVTREHFVAIDKTAVLAFASACRESG-VEHFELLSSVGV-----------SSGSRSFYLRTKGELEDGLEALGFDRLSLFHPSMILTPTNRYGASQAV-ALAIWPLLRPVLLGGLRRFRGVPVETLGRAIAENVV 196
BLAST of mRNA_E-fasciculatus_F_contig10063.74.1 vs. uniprot
Match: A0A4P7RGB3_9BURK (NAD(P)-bd_dom domain-containing protein n=2 Tax=Hydrogenophaga sp. PAMC20947 TaxID=2565558 RepID=A0A4P7RGB3_9BURK) HSP 1 Score: 84.7 bits (208), Expect = 2.910e-16 Identity = 62/177 (35.03%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 22 VLGASGQVGGCVVASLLAEPMCTGIILLNRRKLDKYEGEPRVTQHIVEMDSNIATAAVPLLRDAEVAACFVTMGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRLTGTSAGGGLYLGVKGKVENNFEAVGLESAAFFRPSTLIGNANTPSAAASI 552 +LGA+G VGG +++LLA + L R L + R++QH+V++ A A LL + A C T+GVG+PSK +RE F ++D + AFA A K AG VRH LLGS+G+D ++ +L KG+++ A+G E + F+PS ++ +N A +I Sbjct: 1 MLGATGAVGGAALSALLASTERVRVTTLGRG-LVSQPADSRLSQHVVDVADPSAYAT--LLAGHDSAIC--TLGVGQPSKISREAFVRIDKDAVLAFATACKQAG-VRHFELLGSLGSDPASRS-----------FFLRTKGELQAALVALGFERLSLFQPSMILTPSNRYGLAQAI 160 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10063.74.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10063.74.1 >prot_E-fasciculatus_F_contig10063.74.1 ID=prot_E-fasciculatus_F_contig10063.74.1|Name=mRNA_E-fasciculatus_F_contig10063.74.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=248bp MGRFAAAVLGASGQVGGCVVASLLAEPMCTGIILLNRRKLDKYEGEPRVTback to top mRNA from alignment at E-fasciculatus_F_contig10063:26..3666- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10063.74.1 ID=mRNA_E-fasciculatus_F_contig10063.74.1|Name=mRNA_E-fasciculatus_F_contig10063.74.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3641bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10063:26..3666- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10063:26..3666- >mRNA_E-fasciculatus_F_contig10063.74.1 ID=mRNA_E-fasciculatus_F_contig10063.74.1|Name=mRNA_E-fasciculatus_F_contig10063.74.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1488bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10063:26..3666- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |