mRNA_E-fasciculatus_F_contig10051.64.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10051.64.1 vs. uniprot
Match: A0A6H5K768_9PHAE (FPL domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K768_9PHAE) HSP 1 Score: 584 bits (1506), Expect = 2.970e-191 Identity = 511/563 (90.76%), Postives = 514/563 (91.30%), Query Frame = 1 Query: 7 ASKRREAGKGGGREERSSAEVQVQVIQTISILVMNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQQFFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------GSSFPLYTRALEYICHGDFHVRIAALTVVLNIYNQRDPLVRAYLNSPAARSASLPDRLVGALRSQCLVLADSAMAAGVGXXXXXXXXXXXXXXXXXXXXXXXXX--AVDPTICRDSIAGLQDQVFYLEDVFASGQRELNAELCESLLGRLVRPMLLGDWLSGRSGAMFPQVALCALAQLFIVVTHPPLVRLLVLETLGSETAQGVGPGGXXXXXXXXXXXXXXXX--TAEVDKNGAAAGDKERAGPGAGRSPPLLALLQGDREELCLGALVVLQALAQNQVVRTDLGLTQDAADEPAQDHEGQSDAAAAAGTGAADGQPNGGCAEEG-QQTAAGEXXXXXXXXXXXXXXXXXADPSARP 1650
ASK REA KGGG E RSSAEVQVQVIQTISILVMNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQ TVQ FFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GSSFPLYTRALEYICHGDFHVRIAALTVVLNIYNQRDPLVRAYLNSPAARSASLPDRLVGALRSQCLVLADSAMAAGVGXXXXXXXXXXXXXXXXXXXXXXXXX AVDPTICRDSIAGLQDQVFYLEDVFASGQRELNAELCESLLGRLVRPMLLGDWLSGRSGAMFPQVALCALAQLFIVVTHPPLVRLLVLETLGSE Q + P G XXXXXXXXXXXXX TAEVD GAAAG +ERAG G GR+PPLLALLQGDREELCLGALVVLQALAQNQVVRTDLGLTQD A AQ HEG DAAA GTGAADGQPNGG AEEG QQTAA XXXXXXXXXXXXXXX AD SARP
Sbjct: 334 ASKGREARKGGGGEGRSSAEVQVQVIQTISILVMNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQHTVQ-FFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFPLYTRALEYICHGDFHVRIAALTVVLNIYNQRDPLVRAYLNSPAARSASLPDRLVGALRSQCLVLADSAMAAGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDPTICRDSIAGLQDQVFYLEDVFASGQRELNAELCESLLGRLVRPMLLGDWLSGRSGAMFPQVALCALAQLFIVVTHPPLVRLLVLETLGSEATQELRPVGAVAXXXXXXXXXXXXXXXTAEVDNIGAAAGGEERAGSGVGRAPPLLALLQGDREELCLGALVVLQALAQNQVVRTDLGLTQDTAYNSAQYHEGLPDAAAG-GTGAADGQPNGGYAEEGGQQTAAPXXXXXXXXXXXXXXXXAAADLSARP 894
BLAST of mRNA_E-fasciculatus_F_contig10051.64.1 vs. uniprot
Match: D7FXA7_ECTSI (FPL domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA7_ECTSI) HSP 1 Score: 459 bits (1182), Expect = 7.910e-148 Identity = 394/527 (74.76%), Postives = 397/527 (75.33%), Query Frame = 1 Query: 106 MNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQQFFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------GSSFPLYTRALEYICHGDFHVRIAALTVVLNIYNQRDPLVRAYLNSPAARSASLPDRLVGALRSQCLVLADSAMAAGVGXXXXXXXXXXXXXXXXXXXXXXXXXAVDPTICRDSIAGLQDQVFYLEDVFASGQRELNAELCESLLGRLVRPMLLGDWLSGRSGAMFPQVALCALAQLFIVVTHPPLVRLLVLETLGSETAQGVGPGGXXXXXXXXXXXXXXXXTAEVDKNGAAAGDKERAGPGAGRSPPLLALLQGDREELCLGALVVLQALAQNQVVRTDLGLTQDAADEPAQDHEGQSDAAAAAGTGAADGQPNGGCAEEG-QQTAAGEXXXXXXXXXXXXXXXXXA-DPSARP 1650
MNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQ FFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX XXXXXXX XXXXXXXXXXXXXXXXX GSSFPLYTRALEYICHGDFH+RIAALTVVLNIYNQRDPLVRAYLNSPAARSASLPDRLVGALRSQCLVLADSAMAAGVG XXXXXXXXXXX AVDPTICRDSIAGLQDQVFYLEDVFASGQRELNAELCESLLGRLVRPMLLGDWLSGRSGAMFPQVALCALAQLFIVVTHPPLVRLLVLETLGSE ALAQNQVVRTDLGLTQDAA++ AQDHEG AAAAGTGAADGQPNGGCAEE QQTAAGE XXXXXXXXXXXXX A DPSARP
Sbjct: 1 MNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQ-FFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRDLENGAFSGXXXARDGAPQKXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFPLYTRALEYICHGDFHIRIAALTVVLNIYNQRDPLVRAYLNSPAARSASLPDRLVGALRSQCLVLADSAMAAGVGGGXXXXXXXXXXXEGAPAAAAA---AVDPTICRDSIAGLQDQVFYLEDVFASGQRELNAELCESLLGRLVRPMLLGDWLSGRSGAMFPQVALCALAQLFIVVTHPPLVRLLVLETLGSE------------------------------------------------------------------------ALAQNQVVRTDLGLTQDAAEDSAQDHEGLP-GAAAAGTGAADGQPNGGCAEEEKQQTAAGEGXXXXXXXXXXXXXPAPAVDPSARP 450
BLAST of mRNA_E-fasciculatus_F_contig10051.64.1 vs. uniprot
Match: A0A7S0SME9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SME9_9CHLO) HSP 1 Score: 87.4 bits (215), Expect = 1.780e-16 Identity = 41/81 (50.62%), Postives = 60/81 (74.07%), Query Frame = 1 Query: 43 REERSSAEVQVQVIQTISILVMNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQQFFLRG 285
R A + +Q++QT+SI++ N + TSLFYL SNNH+N++I DF +DEEV++++ SFLKT+SL+LNQ T+Q FF G
Sbjct: 84 RWSHRGAGLTLQLLQTLSIMIQNTREVTSLFYLFSNNHINELIEADFDFDDEEVMAYYISFLKTISLKLNQKTIQFFFFDG 164
BLAST of mRNA_E-fasciculatus_F_contig10051.64.1 vs. uniprot
Match: A0A0P4W6A7_SCYOL (Uncharacterized protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4W6A7_SCYOL) HSP 1 Score: 90.1 bits (222), Expect = 4.620e-16 Identity = 91/375 (24.27%), Postives = 143/375 (38.13%), Query Frame = 1 Query: 46 EERSSAEVQVQVIQTISILVMNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQQFFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFPLYTRALEYICHGDFHVRIAALTVVLNIYNQRDPLVRAYLNSPAARSASLPDRLVGALRSQCLVLADSAMAAGVGXXXXXXXXXXXXXXXXXXXXXXXXXAVDPTICRDSIAGLQDQVFYLEDVFASGQRELNAELCESLLGRLVRPMLLGDWLSGRSGAMFPQ----VALCALAQLFIVVTHPPLVRLL 1158
+++ + V VQ++QT++IL N++++TSL+YLLSNNHVN +I+ F DEEV++++ SFLKTLSL+LN T+ F+ + FPLYT A+++ H + VRIA T+ LN+Y D + ++ A A LV + + L L ++ + + V D +A D + Y+ D+ LNA L + LL RL+ P+L+ + P+ VAL LAQ+F++V+H PLVR L
Sbjct: 10 KQKCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFY-----------------------------------------------------------------------------------------------------NEHTNDFPLYTEAIKFFNHPESMVRIAVRTLTLNVYRVNDQSMLQFIRDRTA--APYFSNLVWFIGNHILEL-ENCVRSDVDHNSRGRL-------------------------EDLVAEHLDHLHYINDILKLNIATLNAVLADHLLNRLLVPLLVYSLNPRQEKDDRPRISSVVALFLLAQVFLIVSHAPLVRAL 255
BLAST of mRNA_E-fasciculatus_F_contig10051.64.1 vs. uniprot
Match: A0A7S4NSB6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NSB6_9EUKA) HSP 1 Score: 84.7 bits (208), Expect = 9.860e-16 Identity = 38/80 (47.50%), Postives = 63/80 (78.75%), Query Frame = 1 Query: 43 REERSSAEVQVQVIQTISILVMNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQQFFLR 282
R R+ ++++Q++QT+SI++ N S TS++Y+LSNN++NDMI F+F DEE+L+++ S LK+L+LRL+ +T+Q FF R
Sbjct: 26 RSPRNDRDIKIQIMQTLSIMLENFTSQTSIYYMLSNNYMNDMIQFNFDFSDEEILAYYISLLKSLALRLDTNTLQFFFNR 105
BLAST of mRNA_E-fasciculatus_F_contig10051.64.1 vs. uniprot
Match: C1E2B3_MICCC (FPL domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E2B3_MICCC) HSP 1 Score: 85.5 bits (210), Expect = 1.120e-15 Identity = 40/78 (51.28%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 43 REERSSAEVQVQVIQTISILVMNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQQFF 276
++ R + + +Q++QT+SI+V N++ +TSLFYL SNNHVN++I DF +DEEV++++ S LKT+SL+LN TVQ FF
Sbjct: 49 QQARHRSHLTLQLLQTLSIMVQNIQLETSLFYLFSNNHVNELIECDFDFDDEEVMAYYISLLKTISLKLNPATVQFFF 126
BLAST of mRNA_E-fasciculatus_F_contig10051.64.1 vs. uniprot
Match: A0A7R9AV84_TIMSH (Hypothetical protein n=1 Tax=Timema shepardi TaxID=629360 RepID=A0A7R9AV84_TIMSH) HSP 1 Score: 90.5 bits (223), Expect = 2.930e-15 Identity = 90/379 (23.75%), Postives = 143/379 (37.73%), Query Frame = 1 Query: 46 EERSSAEVQVQVIQTISILVMNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQQFFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFPLYTRALEYICHGDFHVRIAALTVVLNIYNQRDPLVRAYLNSPAARSASLPDRLVGALRSQCLVLADSAMAAGVGXXXXXXXXXXXXXXXXXXXXXXXXXAVDPTICRDSIAGLQDQVFYLEDVFASGQRELNAELCESLLGRLVRPMLLGDWLSGRSGAMFPQ--------VALCALAQLFIVVTHPPLVRLL 1158
+++ + V VQ++QT++IL N++++TSL+YLLSNNHVN +I+ F DEEV++++ SFLKTLSL+LN T+ F+ R S + + FPLYT A+++ H + VRIA T+ LN+Y D + ++ A A LV + + L L DS + D +A D + YL D+ +LN L + LL +L+ P+ + R + V+L L+Q+F+++TH PLVR+L
Sbjct: 84 KQKCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFYNEVGNRSSSRE----------------------------------------------------GCGGTRLGTWDTGSRSNQNTYPCVSHRCSGLSVMPLLCWQHTNDFPLYTEAIQFFNHPESMVRIAVRTLTLNVYRVEDRSMLQFIRDKTA--APYFSNLVWFIGNHVLEL-DSCVRNDADHQSQNRLS-------------------------DLVAEHLDHLHYLNDILCLDISDLNQVLTDHLLNKLLIPLYVYSLTKRRRDSQLEDAKPHVSSVVSLFLLSQVFLIITHEPLVRVL 382
BLAST of mRNA_E-fasciculatus_F_contig10051.64.1 vs. uniprot
Match: A0A7R8WFI1_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WFI1_9CRUS) HSP 1 Score: 89.4 bits (220), Expect = 4.260e-15 Identity = 96/389 (24.68%), Postives = 146/389 (37.53%), Query Frame = 1 Query: 49 ERSSAEVQVQVIQTISILVMNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQQFFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFPLYTRALEYICHGDFHVRIAALTVVLNIYNQRD-PLVRAYLNSPAARSASLPDRLVGALRSQCLVLADSAMAAGVGXXXXXXXXXXXXXXXXXXXXXXXXXAVDPTICRDSIAGLQDQVFYLEDVFASGQRELNAELCESLLGRLVRPMLLGDWLSGRSGAMFPQ--------VALCALAQLFIVVTHPPLVR---LLVLETLGS 1179
+R + V VQ++QT++IL N++++TS++YLLSNNHVN +I+ F DEEV++++ SFLKTLSL+LN+ T+ FF + FPLYT +++ H + VRIA T+ LN+Y D P++R N AA S LV + + L L DS + D +A D + YL D+ +LN L + LL RL P+ + L R + VAL L+Q+F++++H PLVR L+L+ G+
Sbjct: 89 QRCGSFVCVQLLQTLNILFENIRNETSIYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNKHTIHFFFNEAT-----------------------------------------------------------------------------------------------------NDFPLYTEGIKFFNHSESMVRIAVRTLTLNVYKVGDKPMLRFIRNKTAAPYFS---NLVWFIGNHILEL-DSCVRNDTDHRSRDRLS-------------------------DLVAEHLDHLHYLNDILELKIAQLNEVLVDHLLNRLFLPLYVYSLLKRRRCSRMEDSRPHVSSVVALFLLSQVFLIISHRPLVRSLATLILQVQGN 347
BLAST of mRNA_E-fasciculatus_F_contig10051.64.1 vs. uniprot
Match: A0A0S7KLB6_9TELE (CL16A n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7KLB6_9TELE) HSP 1 Score: 81.3 bits (199), Expect = 4.980e-15 Identity = 39/76 (51.32%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 49 ERSSAEVQVQVIQTISILVMNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQQFF 276
++S V VQ++QT++IL N+ +TSL+YLLSNNHVN +I+ F DEE+++++ SFLKTLSL+LN TV F+
Sbjct: 11 QKSGRYVCVQLLQTLNILFENISHETSLYYLLSNNHVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFY 86
BLAST of mRNA_E-fasciculatus_F_contig10051.64.1 vs. uniprot
Match: UPI001E1CFCCB (protein CLEC16A homolog isoform X1 n=2 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CFCCB) HSP 1 Score: 89.7 bits (221), Expect = 5.500e-15 Identity = 91/375 (24.27%), Postives = 142/375 (37.87%), Query Frame = 1 Query: 46 EERSSAEVQVQVIQTISILVMNVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQQFFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFPLYTRALEYICHGDFHVRIAALTVVLNIYNQRDPLVRAYLNSPAARSASLPDRLVGALRSQCLVLADSAMAAGVGXXXXXXXXXXXXXXXXXXXXXXXXXAVDPTICRDSIAGLQDQVFYLEDVFASGQRELNAELCESLLGRLVRPMLLGDWLSGRSGAMFPQ----VALCALAQLFIVVTHPPLVRLL 1158
+++ + V VQ++QT++IL N++++TSL+YLLSNNHVN +I+ F DEEV++++ SFLKTLSL+LN T+ F+ + FPLYT A+++ H + VRIA T+ LN+Y D + ++ A A LV + + L L ++ + V D +A D + Y+ D+ LNA L + LL RL+ P+L+ + P+ VAL LAQ+F++V+H PLVR L
Sbjct: 84 KQKCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFY-----------------------------------------------------------------------------------------------------NEHTNDFPLYTEAIKFFNHPESMVRIAVRTLTLNVYRVNDQSMLQFIRDRTA--APYFSNLVWFIGNHILEL-ENCVRGDVDHNSRGRL-------------------------EDLVAEHLDHLHYINDILKLNISTLNAVLADHLLNRLLVPLLVYSLNPRQEKDDRPRISSVVALFLLAQVFLIVSHAPLVRAL 329 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10051.64.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10051.64.1 >prot_E-fasciculatus_F_contig10051.64.1 ID=prot_E-fasciculatus_F_contig10051.64.1|Name=mRNA_E-fasciculatus_F_contig10051.64.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=550bp PAASKRREAGKGGGREERSSAEVQVQVIQTISILVMNVKSDTSLFYLLSNback to top mRNA from alignment at E-fasciculatus_F_contig10051:1072..5054+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10051.64.1 ID=mRNA_E-fasciculatus_F_contig10051.64.1|Name=mRNA_E-fasciculatus_F_contig10051.64.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3983bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10051:1072..5054+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10051:1072..5054+ >mRNA_E-fasciculatus_F_contig10051.64.1 ID=mRNA_E-fasciculatus_F_contig10051.64.1|Name=mRNA_E-fasciculatus_F_contig10051.64.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3300bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10051:1072..5054+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |