mRNA_E-fasciculatus_F_contig1004.54.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1004.54.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE) HSP 1 Score: 700 bits (1806), Expect = 1.350e-227 Identity = 377/669 (56.35%), Postives = 462/669 (69.06%), Query Frame = 1 Query: 361 MKLGGDCGFLLALAVFPAAQPVFTQPTRGAVPSASRHGLTRFVGEDIIGVGVGGVRKIPGAAQKLGQDLVDVLEFGHQSTVVGDIELGGLLCDSLDDAPGSTLLNFTLSSTKTVIAERTFYSSIDGSVLPDGNTRKTWLGDVVYPEPAADSIPRTVSMTWTNPCDPETFLLKLVSHNSDGSTSVVTSMPCEAGSSDEICMMELEVFFDEESEEEPEVPTGTSTPAIEEGLDDSSNDQESRMLNERRVSNAERRIGSPGAQGIPGRRRVQGTTVIDVMILYTPEAASERGITDTQLLTRIVEGMVTSNQAITNSEIANLEFRLVHADELPYSQMDYD--SDDGISLAPEISVLSSSTDVAALRDQYQADLVQMVGYFPGTCGAGYAFSGRDTSAFSLVDSNCFDSFSHTHELAHNLGCDHDRENADSDTEYSHAWRYCTGTDTYRTIMANTDGGCAG---------VARVNYFSNPDVSLGGKDTGTTEDDNARTIEDNMETVANFRTN-DIVCTEDGETCTLSTDCCTGFCGSAGACXXXXXXXXXGSPLDVGNSVCEPENNNAECEYDGGDCCECDCIGQECLLPYECTTPEWNCIVDVTVTA-GKFSSLGKQ-YCGDVTSDDFSNCDIFGNDGDEEGCSCTCREASTTASGCGSGDFFNCIDPDSEC 2325
MKL G FLLAL VF A F QPT G PSA R+GL RF ED+ GVG + IP ++ + LV+VLE + V+GDIELG LLCDSL+DA S+LL FT+SST+TVIAERT YSSIDG+VLPDGN RKTWLG+VV PEP+ +SIPRTVSMTWT+PCD ETFLLKLVS NSDGSTS+ TS+PC AGSS EICM+EL+ FF +ES+ V T S+ + +S Q SRML ERRVS GS +QGIP R +QGTTVIDV+I Y+PEAAS GI+D QLLTRIVEGMVT NQAITNS IA+LE+RLVH ELPYSQM YD D I L PE+ L++++ V LR++YQ DLVQ+VGYFPGTCG GY F+G FSLV SNCFD+FSHTHE+AHN+GC HDR+N+++ EY H +RYCTG+D YRTIM+ GC G V +VNYFSNP+V+ K TGT DNAR IE++M V+NFR + D +C++DG+ C + DCC GFCGSAG C G + + VC+PENN EC+YDGGDCCECDC Q C C TP W+C+VD T + G ++ G +C D+++DDF NCD + + C CTCRE+ + CGSG F+C+D S+C
Sbjct: 87 MKLAGSYCFLLALCVFLADHLAFAQPTGGRAPSALRYGLARFAEEDVKDTGVGHLHAIPEDEHQVEEGLVEVLETDELTAVMGDIELGDLLCDSLEDATDSSLLRFTISSTETVIAERTSYSSIDGNVLPDGNARKTWLGEVVDPEPSTNSIPRTVSMTWTDPCDIETFLLKLVSRNSDGSTSIATSVPCSAGSSSEICMVELQKFFYDESDA---VDTSQSSSSSS-----TSKYQGSRMLKERRVSTTFMEEGSRWSQGIPSDRSLQGTTVIDVLIFYSPEAASSEGISDAQLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPIDSDDIDLEPELDALAANSAVNDLRNEYQGDLVQLVGYFPGTCGLGYIFNGNAEFGFSLVGSNCFDNFSHTHEIAHNMGCYHDRDNSETQDEYRHGYRYCTGSDPYRTIMSYYQNGCGGDPTPEADPIVPQVNYFSNPEVTYLNKPTGTATADNARCIEESMVAVSNFRADGDFICSDDGDACAVDIDCCVGFCGSAGICATEECAGLGGDTATIEDMVCDPENNVEECQYDGGDCCECDCSNQVCDEDNTCVTPAWDCVVDQTSSPLGIYTGSGASAFCPDLSADDFDNCDY-----NTQRCLCTCRESDPFTALCGSGTGFDCLDSASDC 742
BLAST of mRNA_E-fasciculatus_F_contig1004.54.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE) HSP 1 Score: 587 bits (1514), Expect = 5.240e-187 Identity = 315/571 (55.17%), Postives = 382/571 (66.90%), Query Frame = 1 Query: 688 STKTVIAERTFYSSIDGSVLPDGNTRK-------------TWLGDVVYPEPAADSIPRTVSMTWTNPCDPETFLLKLVSHNSDGSTSVVTSMPCEAGSSDEICMMELEVFFDEESEEEPEVPTGTSTPAIEEGLDDSSNDQESRMLNERRVSNAERRIGSPGAQGIPGRRRVQGTTVIDVMILYTPEAASERGITDTQLLTRIVEGMVTSNQAITNSEIANLEFRLVHADELPYSQMDYDSDDGISLAPEISVLSSSTDVAALRDQYQADLVQMVGYFPGTCGAGYAFSGRDTSAFSLVDSNCFDSFSHTHELAHNLGCDHDRENADSDTEYSHAWRYCTGTDTYRTIMANTDGGCAG---------VARVNYFSNPDVSLGGKDTGTTEDDNARTIEDNMETVANFRTN-DIVCTEDGETCTLSTDCCTGFCGSAGACXXXXXXXXXGSPLDVGNSVCEPENNNAECEYDGGDCCECDCIGQECLLPYECTTPEWNCIVDVTVTAGKFSSLGKQYCGDVTSDDFSNCDIFGNDGDEEGCSCTCREASTTASGCGSGDFFNCIDPDSECGK 2331
+++TVIAERT YSSIDGSVL DG TRK TWLG+VV PEP+A+SIPRTVSMTWT+PCD E+FLLKLVS N+DGSTS+ TS+PC AGSS+EICM+ELE+FF +ESE E + DQ SRML ERRVS GS +QG+ RR+QGTTVIDV+I+Y+PEAA RGI + QLLTRIVEGMVT NQAITNS IA LE+RLV ELPYSQM Y D I L PE+ L+++++V LR+QYQ DLVQ+VGYFPGTCG GY F+G FSLVDSNCFD+FSHTHE+AHN+GC HD+ N+D+ Y H WRYC G D YRTIM+ GC G V RVNYFSNP+V+ K TGT DNAR IED+M V+ FR + D VC++DG+TCT+ +DCC GFCGSAG C G + + VC+PENN EC+YDGGDCCECDC Q C C TP W+C+VD + ++ C ++ DDF NCD + C CTCRE+ + CGSG F+C+DP S+C K
Sbjct: 5 TSQTVIAERTSYSSIDGSVLSDGITRKDELTGDGSHGLFQTWLGEVVDPEPSANSIPRTVSMTWTDPCDTESFLLKLVSRNADGSTSIFTSVPCSAGSSNEICMVELEMFFHDESETEDTXXXXXXXXXXK--------DQGSRMLKERRVSTTYTEEGSLRSQGMSSDRRLQGTTVIDVLIVYSPEAAYARGIAEAQLLTRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYSQMAYIPSDDIDLKPELDALAANSNVTDLRNQYQGDLVQLVGYFPGTCGLGYIFNGDAAFGFSLVDSNCFDNFSHTHEIAHNMGCYHDKNNSDTQHAYRHGWRYCEGADPYRTIMSYYHNGCGGDPTSEDDPIVPRVNYFSNPNVTYLNKSTGTAAADNARCIEDSMVAVSEFRDDGDFVCSDDGDTCTVDSDCCVGFCGSAGICATEQCGGAGGDTATIEDMVCDPENNVDECQYDGGDCCECDCSNQVCDEDNTCVTPAWDCVVDEALPDNGAYTVPSGDCPSLSFDDFDNCDYT-----TQPCLCTCRESDPATALCGSGTGFDCLDPASDCVK 562
BLAST of mRNA_E-fasciculatus_F_contig1004.54.1 vs. uniprot
Match: D8LLU0_ECTSI (PKD domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU0_ECTSI) HSP 1 Score: 316 bits (809), Expect = 6.310e-93 Identity = 191/435 (43.91%), Postives = 242/435 (55.63%), Query Frame = 1 Query: 382 GFLLALAVFPAAQPVFTQPTRGAVPSASRHGLTRFVGEDIIGVGVGGVRKIPGAAQKLGQDLVDVLEFGHQSTVVGDIELGGLLCDSLDDAPGSTLLNFTLSSTKTVIAERTFYSSIDGSVLPDGNTRKTWLGDVVYPEPAADSIPRTVSMTWTNPCDPETFLLKLVSHNSDGSTSVVTSMPCEAGSSDEICMMELEVFFDEESEEEPEVPTGTSTPAIE----EGLDDSSNDQESRMLNERRVSNAERRIGSPGAQGIPGRRRVQGTTVIDVMILYTPEAASERGITDTQLLTRIVEGMVTSNQAITNSEIANLEFRLVHADELPYSQMDYDSDDGISLAPEISVLSSSTDVAALRDQYQADLVQMVGYFPGTCGAGYAFSGRDTSAFSLVDSNCFDSFSHTHELAHNLGCDHDRENADSD-TEYSHAWRYCTG 1671
G L A+ V P Q Q G +PSA+R TRF ED+ VGVG V I +++ Q+LV LE Q+TVV I LG LLCDSL+DA STLL F +SST+TVIAERT YSSIDG++ PDG TRKTW+G+VV PEP A S PRTVSMTWTNPC E+FLL +VSHN+DGSTS+V S+PC AGSS E+CM+EL V F++ + E E +S QE RML R S ++G PG R +Q +LPY QM DD PE+ ++ + VAALRD+++ADLV +VGYFP TCG G+ F+ + FSL+DS CF +++ THE+ HNLGC HDR+N+++ T Y H RYCTG
Sbjct: 6 GLLFAVGVAPLLQLTRAQAPDGGIPSATRSVWTRFAEEDVSDVGVGEVHPIASDEEEIEQELVAALESDPQATVVVHIGLGELLCDSLEDASDSTLLRFNISSTETVIAERTSYSSIDGNIFPDGETRKTWMGEVVDPEPPAGSAPRTVSMTWTNPCGVESFLLTVVSHNNDGSTSIVRSIPCAAGSSSEVCMVELAVVFNDGDSAVDSISADNDDDDFESMTLENPGESVEGQEGRMLKTIRAPTKSVGKESLHSRGSPGSRELQAGNT-----------------------------------------------------QLPYDQM---LDDTTDYGPELDAMTGNAAVAALRDEHEADLVLLVGYFPNTCGRGWIFNFNEALGFSLMDSICFSNWTQTHEIGHNLGCRHDRDNSNTGMTAYGHGLRYCTG 384
BLAST of mRNA_E-fasciculatus_F_contig1004.54.1 vs. uniprot
Match: D7FTV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV1_ECTSI) HSP 1 Score: 285 bits (729), Expect = 1.160e-83 Identity = 173/309 (55.99%), Postives = 203/309 (65.70%), Query Frame = 1 Query: 583 FGHQSTV--VGDIELGGLLCDSLDDAPGSTLLNFTLSSTKTVIAERTFYSSIDGSVLPDGNTRKTWLGDVVYPEPAADSIPRTVSMTWTNPCDPETFLLKLVSHNSDGSTSVVTSMPCEAGSSDEICMMELEVFFDEESEEEPEVPTGTSTPAIEEGLDDSSNDQESRMLNERRVSNAERRIGSPGAQGIPGRRRVQGTTVIDVMILYTPEAASERGITDTQLLTRIVEGMVTSNQAITNSEIANLEFRLVHADELPYSQMDYDSDDGISLAPEISVLSSSTDVAALRDQYQADLVQMVGYFPGTCGAG 1503
H+S + VGDIELG LLCDSL+DA S+LL FT+SST+TVIAERT YSSIDGSVL DG TR + FLLKLVS N+DGSTS+VTS+PC AGSS E+CM+ELE+FF +ESE V T S D Q SRML E+RVS S +QG+P R +Q TTVIDV+I+Y+PEAA RGI + QLLTRIVEGMVT NQAITNS IA LE+RLV ELPYSQM Y D I L PE+ L+++++V LRDQYQ DLVQ+VGYFPGTCG G
Sbjct: 1 MAHRSFLLFVGDIELGELLCDSLEDAADSSLLRFTISSTETVIAERTSYSSIDGSVLSDGITRMS-------------------------------FLLKLVSRNADGSTSIVTSVPCSAGSSSELCMVELEMFFHDESEA---VDTTQSXXXXXXXKD-----QGSRMLKEQRVSMTYTEEESLRSQGLPSDRSLQATTVIDVLIVYSPEAAYARGIAEAQLLTRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYSQMTYVPSDDIDLKPELDALAANSNVTDLRDQYQGDLVQLVGYFPGTCGLG 270
BLAST of mRNA_E-fasciculatus_F_contig1004.54.1 vs. uniprot
Match: D8LMP2_ECTSI (Peptidyl-Asp metallopeptidase. metallo peptidase. MEROPS family M72 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP2_ECTSI) HSP 1 Score: 231 bits (588), Expect = 5.950e-66 Identity = 112/166 (67.47%), Postives = 130/166 (78.31%), Query Frame = 1 Query: 1180 IDVMILYTPEAASERGITDTQLLTRIVEGMVTSNQAITNSEIANLEFRLVHADELPYSQMDYDSDDGISLAPEISVLSSSTDVAALRDQYQADLVQMVGYFPGTCGAGYAFSGRDTSAFSLVDSNCFDSFSHTHELAHNLGCDHDRENADSDTEYSHAWRYCTGTD 1677
IDV+I Y+PEAAS GI+D QLLTRIVEGMVT NQAITNS IA+LE+RLVH ELPYSQM YD +D I L PE+ L++ +DV LRDQYQ DLVQ+VGYFPGTCG GY F+G FSLV SNCFD+FSHTHE+AHN+GC HDR N+ + H +RYCTGTD
Sbjct: 13 IDVLIFYSPEAASSEGISDAQLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPNDDIDLGPELDALAADSDVDDLRDQYQGDLVQLVGYFPGTCGLGYVFNGNAEYGFSLVGSNCFDNFSHTHEIAHNMGCYHDRLNSGPQDAFRHGYRYCTGTD 178
BLAST of mRNA_E-fasciculatus_F_contig1004.54.1 vs. uniprot
Match: D8LMP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP1_ECTSI) HSP 1 Score: 232 bits (592), Expect = 1.790e-65 Identity = 145/274 (52.92%), Postives = 171/274 (62.41%), Query Frame = 1 Query: 361 MKLGGDCGFLLALAVFPAAQPVFTQPTRGAVPSASRHGLTRFVGEDIIGVGVGGVRKIPGAAQKLGQDLVDVLEFGHQSTVVGDIELGGLLCDSLDDAPGSTLLNFTLSSTKTVIAERTFYSSIDGSVLPDGNTRKTWLGDVVYPEPAADSIPRTVSMTWTNPCDPETFLLKLVSHNSDGSTSVVTSMPCEAGSSDEICMMELEVFFDEESEEEPEVPTGTSTPAIEEGLDDSSNDQESRMLNERRVSNAERRIGSPGAQGIPGRRRVQGTTVI 1182
MKL G FLLAL VF A F QPT G VPSA R+GL RF ED+ GVG V IP ++ ++LV+VLE +TVVGDIELG LLCDSL+DA S+LL FT+SST+TVIAERT YSSIDGS+LPDGNTRKT FLLKLVS NSDGSTS+VTS+PC AGSS EICM+ELE FF +ES+ + +S+ +SN Q SRML ERRVS + GS +Q IP R +QGTTV+
Sbjct: 1 MKLAGSYCFLLALCVFLADHFSFAQPTGGRVPSAPRYGLARFAEEDVKDTGVGHVHPIPEDEHQVEEELVEVLETDELTTVVGDIELGDLLCDSLEDASDSSLLRFTISSTETVIAERTSYSSIDGSILPDGNTRKT-------------------------------FLLKLVSRNSDGSTSIVTSVPCSAGSSSEICMVELEKFFYDESDAVDTAQSSSSS--------STSNYQGSRMLKERRVSTTYTKEGSHRSQDIPSDRSLQGTTVV 235
BLAST of mRNA_E-fasciculatus_F_contig1004.54.1 vs. uniprot
Match: D8LC56_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC56_ECTSI) HSP 1 Score: 175 bits (443), Expect = 2.490e-43 Identity = 137/461 (29.72%), Postives = 219/461 (47.51%), Query Frame = 1 Query: 631 LCDSLDDAPGSTLLNFTLSSTKTVIAERTFYSSIDGSVLPDGNTRKTWLGDVVYPEPAADSIPRTVSMTWTNPCDPETFLLKLVSHNSDGSTSVVTSMPCEAGSSDEICMM-------ELEVFFD--------EESEEEPEVPTGTSTPAIEEG----------------------LDD---SSNDQESRMLNERRVSNAE----------RRIGSPGAQGIPGRRRVQGTTVIDVMILYTPEAASERGITD------TQLLTRIVEGMVTSNQAITNSEIANLEFRLVHADELPYSQMDYDSDDGISLAPEISVLSSSTDVAALRDQYQADLVQMVGYFPGTCGAGYAF----SGRDTSAFSLVDSNCFDSFSHTHELAHNLGCDHDRENA---DSDTEYSHAWRYCTGTDTYRTIMANTDGGCAGVARVNYFSNPDVSLGGKDTGTTEDDNARTIEDNM 1824
+CD+L+DA + L F++ + +TVIA+ +++I W G V E D +PR++SMTWT C + F+++++S DG + S+P + + + E++V D + E+ + G A+++G LDD + D + R L E R ++ E RR+ +PG R + TVIDV++LYT +A E D Q+ + I +N A++ S + N R+VH ++ P+ + D S+ ++ + + V LRD+Y ADLVQ++GY+ TCG G+ SG +S+V +NC +FSH HEL HN G +H++ENA D Y++A+R C +RTIMA + G C RVN FSNPD++ + GT DNAR + + M
Sbjct: 1 MCDTLEDAKEAKALEFSIGAGQTVIADLVSFTTI-------------WTGTVKESEDF-DGLPRSISMTWTADCSTQNFVVQMISPAKDGGVDTMVSLPNPSNGENFLLATVHHNSIDEIDVEDDIGRRLQIADSVGEQTNLRQGVQRSALDDGSEILTPRRLLAKEAERGIERARLDDPDIDAKDNDIRQLQEYRSASPEGQEAFHERGLRRLSEDNVV-MPGGRVLSSETVIDVLVLYTEKAMLESDSGDGAGRSIAQMESDIATAYQGANNALSASGV-NFSVRIVHMEQAPFDESD-------SIVDDVRAIQKNEGVHKLRDEYGADLVQLIGYYLNTCGVGFTMGSPSSGFAQYGYSVVHTNCLSNFSHIHELGHNFGANHNKENAGGSDGVDAYNYAYRNCEVGTKFRTIMAYSSG-CPSTPRVNVFSNPDLTYANQRQGTENADNARVLNEAM 437
BLAST of mRNA_E-fasciculatus_F_contig1004.54.1 vs. uniprot
Match: D8LCP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP8_ECTSI) HSP 1 Score: 142 bits (358), Expect = 3.960e-32 Identity = 112/318 (35.22%), Postives = 154/318 (48.43%), Query Frame = 1 Query: 559 QDLVDVLEFGHQSTVVGDIELGGLLCDSLDDAPGSTLLNFTLSSTKTVIAERTFYSSIDGSVLPDGNTRKTWLGDVVYPEP-AADSIPRTVSMTWTNPCDPETFLLKLVSHNSDGSTSVVTSMPCEAGSSDEICMMELEVFFDEESEEEP----EVPTGTSTPAIEEGLDDSSNDQESRMLNERRVSNAERRIGSPGAQGIPGRRRVQGTTVIDVMILYTPEAASERGITDTQLLTRIVEGMVTSNQAITNSEIANLEFRLVHADELPYSQMDYDSDDGISLAPEISVLSSSTDVAALRDQYQADLVQMVGYFPGTCG 1497
++L + LE Q TV+G+++LG LLCDSL A + LL F LS+ +T+IA RT Y+ + G G R+ W G V+ PEP A ++ PR VSMTW CD ETF LK+ H +G+TS V S+PC S E+C+ +EV FD +EP TG ST A+ L D SR + M+LYT + G++D Q+ T + + T N NS I +E V+ LPY Q D + ++S L V ALRD+Y AD+V +V Y CG
Sbjct: 148 KELAETLEVDEQVTVLGEVQLGELLCDSLVQAEDAPLLQFALSANETIIANRTSYTVVSGETFTGGVGRRIWNGVVIDPEPDAGEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSAVKSVPCGL-SGVEVCL--VEVAFDFLPGKEPLRVGVNSTGQST-AVRRRLGDGILGGGSRDRHXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXMVLYTNMSLVLMGVSDVQMETMVSAAISTVNVGFENSNIG-IETTTVYKGRLPYYQ-----DCADDSSTKLSALREDEGVNALRDEYGADIVLLVDYLTDACG 454
BLAST of mRNA_E-fasciculatus_F_contig1004.54.1 vs. uniprot
Match: A0A835YK21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK21_9STRA) HSP 1 Score: 147 bits (370), Expect = 6.330e-32 Identity = 140/447 (31.32%), Postives = 200/447 (44.74%), Query Frame = 1 Query: 604 VGDIELGGLLCDSLDDAPGSTLLNFTLSSTKTVIAERTFYSSIDGSVLPDGNTRKTWLGDVVYPEPAADSIPRTVSMTWTNPCDPETFLLKL-VSHNSDGSTSVVTSMPCE---AGSSDEICMMELEVFFDEESEEEPEVPTGTSTPAIEEGLDDSSNDQESRMLNERRVSNAE----------RRIGSPGAQGIPGRRRVQGTTVIDVMILYTPEAASERGITDTQLLTRIVEGMVTSNQAITNSEIANLEFRLVHADELPYSQMDYD--------SDDGISLAPEISVLSSSTDVAALRDQYQADLVQMVGYFPGTCGAGYAFSGRDTS----AFSLVDSNCFDSFSHTHELAHNLGCDHDRENADSDT--EYSHAWRYC----TGTDTYRTIMANTDGGCAGVARVNYFSNPDVSLGGKDTGTTED-DNARTIEDNMETVANFR 1845
VG ++ G L CDS+ + L F A RT Y + PD R W+G++V V++ W + C P F L + + +D + V+TS+PC A S + +E EE EE A D + D++ +L + ++ RR+ GA +P RR+ +V+ V+ LYT TD + ++IV G+V++NQA+ NS N F+L A + +DYD SD S P V LRD Y+ADLVQM+ P CG G S +S +S+V S+C S+SH HE+ HN+GC H+ EN+ T Y +RYC T +RTIM+ C G RV YFS+P++ G TGT DN R + TVANFR
Sbjct: 132 VGSVQQGELRCDSMGLSASMMSLKFQFKGIL-YYAARTHYQ-----MFPDQGGRHAWMGELVGQV-------GFVNIVWDDACSPSVFQLDVHLEDGADNTRRVITSVPCSPSTATSKQCTWLATVETDLREEYHEEDRRMWEKLAAAEAPNPDRDAFDKDLALLQQMLTGDSAATEVFARSGGRRLHEEGAVLMPSGRRLDDGSVVRVLWLYTNRVRDRW--TDATITSKIVSGVVSANQALINS---NAGFQLEAAAII---NIDYDDVSHVQSLSDLSYSAIPXXXXXXXXXXVTFLRDFYRADLVQMIIEAPEYCGYGNLLSSASSSFASYGYSVVYSDCIASYSHIHEIGHNMGCQHNVENSGQTTVWPYGDGYRYCNDGVTQAPYFRTIMSYA---CTGATRVPYFSSPNIYYQGVATGTAATADNLRVLLQTKYTVANFR 554
BLAST of mRNA_E-fasciculatus_F_contig1004.54.1 vs. uniprot
Match: A0A836CMI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI7_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.960e-31 Identity = 131/436 (30.05%), Postives = 197/436 (45.18%), Query Frame = 1 Query: 604 VGDIELGGLLCDSLDDAPGSTLLNFTLSSTKTVIAERTFYSSIDGSVLPDGNTRKTWLGDVVYPEPAADSIPRTVSMTWTNPCDPETFLLKL-VSHNSDGSTSVVTSMPCEAGSSDEICMM------ELEVFFDEESEEEPEVPTGTSTPAIEEGLDDSSNDQESRM-----LNERRVSNAERRIGSPGAQGIPGRRRVQGTTVIDVMILYTPEAASERGITDTQLLTRIVEGMVTSNQAITNSEIANLEFRLVHADELPYSQMDYDSDDGISLAPEISVLSSSTDVAALRDQYQADLVQMVGYFPGTCGAGYAFSGRDTS----AFSLVDSNCFDSFSHTHELAHNLGCDHDRENADSDTEYSHA--WRYCTG----TDTYRTIMANTDGGCAGVARVNYFSNPDVSLGGKDTGTTEDDNARTIEDNMETVANFR 1845
VG + G L C SL + LNF+ + A +T D R W+G++ VS+ W + CDP F L + ++ ++DG +TS+PC +S C+ E+ FD E + T ++ LDD + M ++ V N RR+ G +P RR+ + + V+ LY+ TD + ++I G+ T+NQA+ NS ++ FR+ A +DYD + ++ S + RD+Y ADLVQMV CG G +S FS+V S+C S+SH HE+ HN+GC H+ EN+ T +S+ +RYC + YR++M+ C G RV YFS+PDV G+ TG DN R +E TVANFR
Sbjct: 55 VGSVHRGELNCASLGLSESMPSLNFSFQGGQ-YFAVKTL-----SDFFGDAGGRHVWVGELTEQV-------GFVSVVWDDACDPRVFQLDVTLASDNDGHRHTITSIPCSEATSVPSCVWMAAVATEMRDEFDVFDRRHLESVMASHTQDHQD-LDDDVELLQQLMDGNGDAHDHFVKNGGRRLEEAGQVVMPSGRRLDDGSTVRVLWLYSNRVRDRW--TDDTITSKIAAGVATANQALANSGVS---FRVKAA---AIMHVDYDDTTHMEALAALNT-GSIAGINTARDKYSADLVQMVIESSEYCGYGNLLYSASSSFAPYGFSVVYSDCIVSYSHIHEIGHNMGCQHNAENSGDATMWSYGVGYRYCNDGVSKSPYYRSVMSYA---CTGATRVPYFSSPDVEYQGRTTGLDTADNVRVLEQTHYTVANFR 464 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1004.54.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1004.54.1 >prot_E-fasciculatus_F_contig1004.54.1 ID=prot_E-fasciculatus_F_contig1004.54.1|Name=mRNA_E-fasciculatus_F_contig1004.54.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=686bp MKLGGDCGFLLALAVFPAAQPVFTQPTRGAVPSASRHGLTRFVGEDIIGVback to top mRNA from alignment at E-fasciculatus_F_contig1004:3346..20276+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1004.54.1 ID=mRNA_E-fasciculatus_F_contig1004.54.1|Name=mRNA_E-fasciculatus_F_contig1004.54.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=16931bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1004:3346..20276+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1004:3346..20276+ >mRNA_E-fasciculatus_F_contig1004.54.1 ID=mRNA_E-fasciculatus_F_contig1004.54.1|Name=mRNA_E-fasciculatus_F_contig1004.54.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4116bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1004:3346..20276+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |