mRNA_E-fasciculatus_F_contig1002.37.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1002.37.1 vs. uniprot
Match: A0A6H5JFC7_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC7_9PHAE) HSP 1 Score: 765 bits (1976), Expect = 3.690e-260 Identity = 435/595 (73.11%), Postives = 466/595 (78.32%), Query Frame = 1 Query: 4 LTRTHAHNRARPSSSSL---PTRTSFTTVQQRSQPLRNMFSSSYKARFAAGLLLVATVASRLSVGLAKTVSVKPGGLQSALDKAKPGDTLRLAPGEYWETVVTKTAGREDAYITIEGETYGAIIKGDQDIDNDGYIMKIEHSYYRLDRFTIDGKHSKNNYADKCLYVQQNRDNDDKAKTIKFNDHKFRSSINGMVLSNMDINNCGGECVRMRYFITYAQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSNEPDESSYNHFFKNHFDTQGNEGIDIKEGSRFNIVEDNYCTGQKDPNSACLDARGDSNIFRYNTCENNLGAGIRIGGHKIDGHQYGQKNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDIRGSSFAEKLSPEDSCDSLSGDLEADESSXXXXXXXXXXXXXXXXALRDAKKKCRQNKEERAAHGMLEQDSKNKDSDXXXXXXXXXXSSDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSEEGARVTGRIIEETKKSERAQHPTVEYPHYTDFVPPTI 1779
L +H+H R++PS S + P R TVQQRSQ RNM SSSYK RFAAGLLLVAT AS LSVGLA T+SVKPGGLQSALDKAKPGDTLRLAPGEYWET VTKTAGREDAYITIEGETYGAI+KGDQ IDNDGY +KIEHSYYRLDRFTIDGKHSKNNY DKCLYVQQNRDNDDKAK I FN HKFRSSING+VLSNMDINNCGGECVRMRYF+TY+QVYNNRITNCGTHD+VM+G SKNGEGIYLGTSSNQWDDGKNPS+EPDESSYNHFFKNHFDTQGNEGIDIKEG+R+NIVEDNYCTGQKDPNSACLDARGDSNIFR+NTCE+NLGAGIRIGGHKIDGHQYGQ NEVYENLLENN YAGIKITMSPQGAVCSNDILGSKYD RGSS+AEKL PEDSC+ LSGD+ D+ S LR+AK++CR+NK ERA +LE D KN +D XXXXXXXXXXXXXXXXXXXXXXXXXX +SD +GA VTGRIIEETKKSERAQHPTVEYP YT+FVPPTI
Sbjct: 267 LNASHSHTRSQPSPSLIDIPPYRRPSRTVQQRSQTPRNMSSSSYKTRFAAGLLLVATAASHLSVGLAATISVKPGGLQSALDKAKPGDTLRLAPGEYWETAVTKTAGREDAYITIEGETYGAIVKGDQGIDNDGYALKIEHSYYRLDRFTIDGKHSKNNYIDKCLYVQQNRDNDDKAKKINFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDYVMNGSSKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGARYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNGYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLKPEDSCEKLSGDISVDDCSDCQDVERLEKE------LREAKRECRKNKGERAVLDLLENDGKN---------------NDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKQESDG----------------------------------------------KGAHVTGRIIEETKKSERAQHPTVEYPKYTEFVPPTI 794
BLAST of mRNA_E-fasciculatus_F_contig1002.37.1 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI) HSP 1 Score: 710 bits (1833), Expect = 3.470e-245 Identity = 346/373 (92.76%), Postives = 358/373 (95.98%), Query Frame = 1 Query: 109 MFSSSYKARFAAGLLLVATVASRLSVGLAKTVSVKPGGLQSALDKAKPGDTLRLAPGEYWETVVTKTAGREDAYITIEGETYGAIIKGDQDIDNDGYIMKIEHSYYRLDRFTIDGKHSKNNYADKCLYVQQNRDNDDKAKTIKFNDHKFRSSINGMVLSNMDINNCGGECVRMRYFITYAQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSNEPDESSYNHFFKNHFDTQGNEGIDIKEGSRFNIVEDNYCTGQKDPNSACLDARGDSNIFRYNTCENNLGAGIRIGGHKIDGHQYGQKNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDIRGSSFAEKLSPEDSCDSLSGDLEA 1227
M SSSYK RFAAGLLLVAT AS LSVGLA T+SVKPGGLQSALDKAKPGDTLRLAPGEYWET VTKTAGREDAYITIEGETYGAI+KGDQDIDNDGY +KIEHSYYRLDRFTIDGKHSKNNY DKCLYVQQNRDNDDKAK IKFN HKFRSSING+VLSNMDINNCGGECVRMRYF+TY+QVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPS+EPDESSYNHFFKNHFDTQGNEGIDIKEGSR+NIVEDNYCTGQKDPNSACLDARGDSNIFR+NTCE+NLGAGIRIGGHKIDGHQYGQ NEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYD RGSS+AEKLSPE SC+ LSGDL A
Sbjct: 1 MSSSSYKTRFAAGLLLVATAASHLSVGLAATISVKPGGLQSALDKAKPGDTLRLAPGEYWETAVTKTAGREDAYITIEGETYGAIVKGDQDIDNDGYALKIEHSYYRLDRFTIDGKHSKNNYIDKCLYVQQNRDNDDKAKKIKFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEGSCEKLSGDLSA 373
BLAST of mRNA_E-fasciculatus_F_contig1002.37.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55) HSP 1 Score: 270 bits (690), Expect = 1.700e-77 Identity = 151/331 (45.62%), Postives = 199/331 (60.12%), Query Frame = 1 Query: 223 LQSALDKAKPGDTLRLAPGEYWETVVTKTAGREDAYITIEGETYGAIIKGDQDIDNDGYIMKIEHSYYRLDRFTIDGKHSKNN----YADKCLYVQQNRDNDDKAKTIKFNDHKFRSSINGMVLSNMDINNCGGECVRMRYFITYAQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSNEPDESSYNHFFKNHFDTQGNEGIDIKEGSRFNIVEDNYCTGQKDPNSACLDARGDSNIFRYNTCENNLGAGIRIGGHKIDGHQYGQKNEVYENLLENNDYAGIKITMSPQGAVCSNDIL-GSKYDIRGSSFAEKLSPEDSC 1200
+ AL A+ GD + L PG Y+E V + G+ D I I G A++ G Q G I++I HSY L FTIDG+ N + D +YV+ N + G V+ M + N GGECVR+RY++T A++++N NCG +DF + G KNGE IY+GTSSNQWDDGKNP+ PD S++N N F T GNE +DIKEG+ +N+VE N C+GQ+DPNSA D+RGD NIFRYN +N GAG+R+GG+ +DG QYG N+VY NLL NN AG+K+ +PQ VC N ++ DI GSS A PE SC
Sbjct: 59 INMALSLAQAGDRVYLQPGHYYENVRSVRHGQADMPIIIHGSK-SAVLHGAQ-----GRILEINHSYIHLRNFTIDGQVGSGNTMEDFRDILVYVKGNEP---------------QQGPTGFVMRAMSLKNAGGECVRLRYYVTEAEIFDNTFYNCGVYDFKFNNGGKNGEAIYVGTSSNQWDDGKNPTGGPDPSNHNWIHHNKFLTNGNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGNPTSDNTEGDIMGSS-AMSYDPELSC 367
BLAST of mRNA_E-fasciculatus_F_contig1002.37.1 vs. uniprot
Match: A0A261GHV7_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GHV7_9GAMM) HSP 1 Score: 264 bits (675), Expect = 2.690e-75 Identity = 148/320 (46.25%), Postives = 195/320 (60.94%), Query Frame = 1 Query: 223 LQSALDKAKPGDTLRLAPGEYWETVVTKTAGREDAYITIEGETYGAIIKGDQDIDNDGYIMKIEHSYYRLDRFTIDGKHSKNN----YADKCLYVQQNRDNDDKAKTIKFNDHKFRSSINGMVLSNMDINNCGGECVRMRYFITYAQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSNEPDESSYNHFFKNHFDTQGNEGIDIKEGSRFNIVEDNYCTGQKDPNSACLDARGDSNIFRYNTCENNLGAGIRIGGHKIDGHQYGQKNEVYENLLENNDYAGIKITMSPQGAVCSNDIL-GSKYDIRGSS 1167
+ +AL+ A+PGD + L G+Y++ V T +G I I+G T A++KG +N G +++I H Y L FTIDG K N Y ++VQ +HK G V+ +M I N GGECVR+RY +T A+++ N NCG +DF DG KNGE IY+GTSS QWDDGKNPS +PD S+YN N+F T+GNE +DIKEG+ N+VE+N C GQ+DP S DARGD NI RYN +N GAGIR+GG+ ++G QYG NEVY N + +ND +GIKI PQ VC N + SK +I G S
Sbjct: 64 INAALEYAQPGDRVYLLEGKYYQDVKTVRSGLRSKPILIQG-TKSAVLKG----ENGGRVLQINHDYIHLRNFTIDGLVGKGNGPEDYRKSLIFVQGT-------------EHK--QGPEGFVMRSMRIRNAGGECVRLRYHVTRAEIFGNTFYNCGAYDFQFDGRGKNGEAIYIGTSSEQWDDGKNPSADPDHSNYNWVHHNYFLTRGNECVDIKEGAAHNLVENNICAGQQDPASGGFDARGDYNIIRYNVSYSNKGAGIRVGGNMVNGRQYGVFNEVYGNKIFDNDNSGIKIMTYPQRYVCGNSMTDNSKGNITGES 363
BLAST of mRNA_E-fasciculatus_F_contig1002.37.1 vs. uniprot
Match: UPI0019FF4931 (DUF1565 domain-containing protein n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019FF4931) HSP 1 Score: 266 bits (681), Expect = 1.260e-74 Identity = 147/337 (43.62%), Postives = 200/337 (59.35%), Query Frame = 1 Query: 223 LQSALDKAKPGDTLRLAPGEYWETVVTKTAGREDAYITIEGETYGAIIKGDQDIDNDGYIMKIEHSYYRLDRFTIDGKHSKNNYADKCLYVQQNRDNDDKAKTIKFNDHKFRSSINGMVLSNMDINNCGGECVRMRYFITYAQVYNNRITNCGTHDFV---MDGGSKNGEGIYLGTSSNQWDDGKNPSNEPDESSYNHFFKNHFDTQGNEGIDIKEGSRFNIVEDNYCTGQKDPNSACLDARGDSNIFRYNTCENNLGAGIRIGGHKIDGHQYGQKNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDIRGSSFAEKLSPEDSCDSLSGDLE 1224
+Q A+D A+PGDT+ LA G Y + + ++ G A IT+ G + AIIKG + I +I H Y LD FTIDG+ S + Y DK L+V + R ++G+ + NM N GGEC+R+RYF ++ + NCG D+ GG KNGE IY+GTS+NQW DGKNP+NEPD+S+ N N +TQGNE +DIKEG+ NIVE N CTGQKD NSA LD+RGD N FRYN N+G G+R+GG +DG QYG+ N VY+N++ +N G+K ++PQG +C N + + FA + P+ SC +G LE
Sbjct: 57 IQKAVDLAQPGDTINLASGTYNQDIRSRRNGTASAPITLIGPS-NAIIKG----GGNSRIFEINHDYLTLDGFTIDGQVSSSLYRDKLLFVIGT---------------EVRDGVSGLRVLNMTFKNAGGECLRLRYFAQNNEIAYSTFLNCGQDDYPGGEWAGGGKNGEAIYIGTSNNQWGDGKNPTNEPDQSNNNWVHNNFMNTQGNECVDIKEGATGNIVEYNECTGQKDENSAGLDSRGDGNTFRYNETYGNVGGGVRLGGALVDGEQYGKNNNVYDNIIYDNIAGGVKFMVTPQGKICGNTMWNNTGGDSFGDFANQFDPKASCSGSAGALE 373
BLAST of mRNA_E-fasciculatus_F_contig1002.37.1 vs. uniprot
Match: Q6XM06_9PHYC (FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM06_9PHYC) HSP 1 Score: 266 bits (679), Expect = 1.350e-72 Identity = 159/382 (41.62%), Postives = 222/382 (58.12%), Query Frame = 1 Query: 79 VQQRSQPLRNMFSSSYKARFAA--GLLLVATVASRLSVGLAKTVSVKPGGLQSALDKAKPGDTLRLAPGEYWETVVTKTAGREDAYITIEGETYGAIIKGDQDIDNDGYIMKIEHSYYRLDRFTIDGKHSKNN----YADKCLYVQQNRDNDDKAKTIKFNDHKFRSSINGMVLSNMDINNCGGECVRMRYFITYAQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSNEPDESSYNHFFKNHFDTQGNEGIDIKEGSRFNIVEDNYCTGQKDPNSACLDARGDSNIFRYNTCENNLGAGIRIGGHKIDGHQYGQKNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDIRGSSFAEKLS--PEDSC 1200
V + +P R++ Y AA G LL A+ A L + S+ Q LDKA+PGDTLRLA G+Y + + T +G ITIEG A++ G ++ I+++ HSY L FT+ GK + N Y DKC++V + + + ++ SSI G+++ +M++ +CGGEC+R+R F+T+A+V NRI CG HD++ DG KNGE IY+GTSSNQW+DGKN + PD++ Y N DTQ NE +D+KEGS +VE N C+ Q D NSA D+R D FRYN N GAGIRIGGHKIDG YG+ NE Y N++ NN Y+ IK+ Q C ND ++G+ AE + P+D+C
Sbjct: 9 VSNKMRPSRDILLMEYPKCAAAVVGALLCASAAVGEIFKLTPSDSI-----QRVLDKARPGDTLRLAEGKYAQDIQTVRSG-----ITIEGSKK-AVVMGS---GHEHRIVEVNHSYTTLRGFTVSGKRNSGNDPSDYVDKCIFVM----GISSPEIERTSGIEYESSITGVIIEDMEVEDCGGECIRLRSFVTHAEVTGNRIERCGRHDYLFDGAGKNGEAIYVGTSSNQWNDGKNSKSGPDKTKYIWIHDNVIDTQANECVDVKEGSTDVLVEYNACSNQLDTNSAGFDSRTDDVTFRYNEVSNCAGAGIRIGGHKIDGKTYGENNEAYGNVMRNNAYSAIKVETGKQHVFCQNDCGKEGCTVKGNR-AESVGGDPDDTC 371
BLAST of mRNA_E-fasciculatus_F_contig1002.37.1 vs. uniprot
Match: A0A1Y0IFB0_9GAMM (Secreted protein n=2 Tax=Oleiphilus messinensis TaxID=141451 RepID=A0A1Y0IFB0_9GAMM) HSP 1 Score: 254 bits (648), Expect = 2.680e-71 Identity = 140/320 (43.75%), Postives = 191/320 (59.69%), Query Frame = 1 Query: 223 LQSALDKAKPGDTLRLAPGEYWETVVTKTAGREDAYITIEGETYGAIIKGDQDIDNDGYIMKIEHSYYRLDRFTIDGKHSKNN----YADKCLYVQQNRDNDDKAKTIKFNDHKFRSSINGMVLSNMDINNCGGECVRMRYFITYAQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSNEPDESSYNHFFKNHFDTQGNEGIDIKEGSRFNIVEDNYCTGQKDPNSACLDARGDSNIFRYNTCENNLGAGIRIGGHKIDGHQYGQKNEVYENLLENNDYAGIKITMSPQGAVCSNDILGS-KYDIRGSS 1167
+ +AL A+PG+ + L PGEY+E + T +G D I I G AI+KG Q I +I HSY L F+IDGK N + D ++VQ + +S G+VL +M + N GGECVR++YF+T A+++ N I NCG +DF G KNGEGIY+GT+ QWD+GKNPS +PD S+ N + N F T GNE +DIKEG+ +N++E N C Q DPNS DARGD+NIFRYN N GAG+R+GG G QYG N+VY N++ N +AG+K+ PQ +CSN + + + D G+S
Sbjct: 80 INTALSYAEPGERVYLMPGEYFEDIKTVRSGTPDQPILIYGSKK-AIVKGAQK----NRIFQIFHSYIHLRNFSIDGKVGAGNAIEDFRDILVWVQG---------------QEIKSGPKGVVLRSMILQNAGGECVRLKYFVTQAEIFGNLIRNCGVYDFQFAAGGKNGEGIYIGTAPEQWDNGKNPSADPDHSNGNWVWGNKFYTYGNECVDIKEGAEYNLIEYNACQNQLDPNSGGFDARGDNNIFRYNIAHTNTGAGVRLGGDLHQGRQYGINNQVYGNIIYGNGHAGVKVMSYPQDQICSNMLFDNGRSDFYGNS 379
BLAST of mRNA_E-fasciculatus_F_contig1002.37.1 vs. uniprot
Match: UPI001998BEE9 (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Roseiflexaceae bacterium TaxID=2762507 RepID=UPI001998BEE9) HSP 1 Score: 251 bits (641), Expect = 8.660e-71 Identity = 143/334 (42.81%), Postives = 197/334 (58.98%), Query Frame = 1 Query: 223 LQSALDKAKPGDTLRLAPGEYWETVVTKTAGREDAYITIEGETYGAIIKGDQDIDNDGYIMKIEHSYYRLDRFTIDGKH----SKNNYADKCLYVQQNRDNDDKAKTIKFNDHKFRSSINGMVLSNMDINNCGGECVRMRYFITYAQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSNEPDESSYNHFFKNHFDTQGNEGIDIKEGSRFNIVEDNYCTGQKDPNSACLDARGDSNIFRYNTCENNLGAGIRIGGHKIDGHQYGQKNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDIRGSSFAEKLSPEDSCDSLS 1212
+Q A+D A+PGD++ LA GEY + VV+K G A ITI G AI+KG +G I+++ H Y D FTIDG + S ++Y DK LYV + D ++G+ + NM N GGEC+R+RYF+ +++ + NCG DF G KNGE IY+GT+ Q DGKNP+ +PD+S+ N N+F+TQGNE +DIKE + NIVE+N CTGQKDPNSA D+RG NIFRYNT N+GAG+R+GG D G N+VY N+L +ND GIK +PQ +C N I ++ S+ ++ +P C + S
Sbjct: 40 VQKAVDLAQPGDSITLASGEYLQDVVSKRNGSPSAPITISGPA-DAIVKG----AGNGRIVEVRHDYLTFDGFTIDGLYGNPNSSDSYRDKLLYVIGDAPLD---------------GVSGLKVLNMTFRNGGGECLRLRYFVQNSEIAQSTFLNCGVRDFRFKAGGKNGEAIYIGTAPEQRGDGKNPTTDPDQSNNNWIHHNNFNTQGNECVDIKEAATNNIVENNTCTGQKDPNSAGFDSRGSGNIFRYNTSYGNVGAGVRLGG---DTATDGIDNQVYANILHHNDAGGIKFQRAPQRTICGNTINDNRGGDATGSYPDRYNPTAPCQNAS 350
BLAST of mRNA_E-fasciculatus_F_contig1002.37.1 vs. uniprot
Match: A0A1F7IHP9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_35_13 TaxID=1802055 RepID=A0A1F7IHP9_9BACT) HSP 1 Score: 249 bits (635), Expect = 1.260e-69 Identity = 145/340 (42.65%), Postives = 194/340 (57.06%), Query Frame = 1 Query: 196 KTVSVKP-GGLQSALDKAKPGDTLRLAPGEYWETVVTKTAGREDAYITIEGETYGAIIKGDQDIDNDGYIMKIEHSYYRLDRFTIDGKHSKNN----YADKCLYVQQNRDNDDKAKTIKFNDHKFRSSINGMVLSNMDINNCGGECVRMRYFITYAQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSNEPDESSYNHFFKNHFDTQGNEGIDIKEGSRFNIVEDNYCTGQKDPNSACLDARGDSNIFRYNTCENNLGAGIRIGGHKIDGHQYGQKNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDIRGSSFAEKLSPEDSC 1200
K + V P +Q A+D A+PG+T++L PG Y + V+K +G + ITI G ++KG +++I H + L +FT+DG H + Y DK +YV R + G+ + +M+I N GGECVR+RYF ++ N I CG DF GG KNGEGIY+GT+ Q DGKNP+++ DES+ N N +TQGNE +DIKEGS NIVE N CTGQKD SA LD+RG NIFRYN NLGAG+R+GG D G N+VYEN ++NN GIK +PQG +C N + G+K S AE+ +P SC
Sbjct: 75 KVIEVSPVESIQKAIDNAQPGETIKLLPGVYNQDFVSKRSGTAEKPITITGSK-DVVVKG----GGKARVIEINHDHIILSKFTVDGLHGDSGRVEGYRDKLIYVLGK---------------SARKGVTGLKILSMNIKNAGGECVRLRYFAQNNEIAYNSINRCGIVDFEFKGGGKNGEGIYIGTAPEQLKDGKNPTSDIDESNNNLIHHNTINTQGNECVDIKEGSSGNIVEYNNCTGQKDKESAGLDSRGSKNIFRYNEVYGNLGAGVRLGG---DEDNDGINNDVYENTIKNNVSGGIKFQRAPQGKICGNKMEGNKGGDSVGSEAEEFNPTKSC 391
BLAST of mRNA_E-fasciculatus_F_contig1002.37.1 vs. uniprot
Match: A0A1F7IR59_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_38_12 TaxID=1802061 RepID=A0A1F7IR59_9BACT) HSP 1 Score: 244 bits (624), Expect = 1.880e-69 Identity = 140/312 (44.87%), Postives = 183/312 (58.65%), Query Frame = 1 Query: 277 GEYWETVVTKTAGREDAYITIEGETYGAIIKGDQDIDNDGYIMKIEHSYYRLDRFTIDGKHSKNN----YADKCLYVQQNRDNDDKAKTIKFNDHKFRSSINGMVLSNMDINNCGGECVRMRYFITYAQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSNEPDESSYNHFFKNHFDTQGNEGIDIKEGSRFNIVEDNYCTGQKDPNSACLDARGDSNIFRYNTCENNLGAGIRIGGHKIDGHQYGQKNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDIRGSSFAEKLSPEDSC 1200
G Y + VTK G + ITI G A++KG +++G +++I H LD FTIDG H +N Y DK +Y Q +D +NG+ + NM I N GGECVR+RY+ ++ N IT+CG HD+ D G KNGEG+Y+GT+ Q DDGKNP+N+ DES+ N N FDTQGNE +DIKE S++NIVE+N CTGQKDP S LD+RG NIFRYN N GAGIR+GG +D + NEVYEN++ NN GIKI +PQG +C N + G+ + E P C
Sbjct: 3 GVYRQDFVTKRDGTLVSPITITGPR-DALVKG----ESNGRVIEINHDNIILDGFTIDGLHGDDNLQDGYRDKLIYAQGKGQHD---------------GVNGLKILNMTIKNAGGECVRLRYYAQNNEIAYNTITSCGRHDYKFDDGGKNGEGVYIGTAPEQRDDGKNPTNDNDESNGNWIHHNFFDTQGNECVDIKENSKYNIVENNECTGQKDPESGGLDSRGGYNIFRYNNIYGNSGAGIRLGGDTVDENIM---NEVYENIIVNNKKGGIKIMTAPQGKMCDNIMSGNDGGNAVGEYGEDYDPTKGC 291 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1002.37.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1002.37.1 >prot_E-fasciculatus_F_contig1002.37.1 ID=prot_E-fasciculatus_F_contig1002.37.1|Name=mRNA_E-fasciculatus_F_contig1002.37.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=558bp MFSSSYKARFAAGLLLVATVASRLSVGLAKTVSVKPGGLQSALDKAKPGDback to top mRNA from alignment at E-fasciculatus_F_contig1002:7238..20189+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1002.37.1 ID=mRNA_E-fasciculatus_F_contig1002.37.1|Name=mRNA_E-fasciculatus_F_contig1002.37.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=12952bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1002:7238..20189+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1002:7238..20189+ >mRNA_E-fasciculatus_F_contig1002.37.1 ID=mRNA_E-fasciculatus_F_contig1002.37.1|Name=mRNA_E-fasciculatus_F_contig1002.37.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3348bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1002:7238..20189+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |