mRNA_E-fasciculatus_F_contig1002.36.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1002.36.1 vs. uniprot
Match: D7G1E7_ECTSI (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E7_ECTSI) HSP 1 Score: 441 bits (1133), Expect = 2.250e-152 Identity = 230/285 (80.70%), Postives = 238/285 (83.51%), Query Frame = 1 Query: 316 MFRRRQFHTKPTASDSL-GGAKALRDTKEEGNEEKDGRDRAVGFQFKEVGTLANRAKNPVVFLDVSIGGIPARLTFELRKDIVPRTAENFRSICAGDRADTEDGTRLSYQGCVFHRIIKDFAVIGGDIAVTTADTQKYFALPVPRN-----RPGSHIEHDGTGRASIYGGPFADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALDKLEACGVEGGRPSLYIQASRVMMSRLVPMIWPFCCRRHDLSKLLTAHPSRNSRT 1152
MFRRRQFHTKPTASDSL GGAK LRDTKEE NEEK+GRDRAVGFQFKEVGTLANRAKNPVVFLDVSIGG+PARLTFELRKDIVPRTAENFRSICAGDRADT+DGTRLSYQGCVFHR+IKDFAVIGGDIA T D QK FAL P R S HDGTGRASIYGG FADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDAL+KLEACGVEGGRPS+YIQAS + + H LLT HPS RT
Sbjct: 1 MFRRRQFHTKPTASDSLVGGAKTLRDTKEEENEEKEGRDRAVGFQFKEVGTLANRAKNPVVFLDVSIGGVPARLTFELRKDIVPRTAENFRSICAGDRADTQDGTRLSYQGCVFHRVIKDFAVIGGDIASDTTDKQKTFALSKPTKESTAERWRSSKRHDGTGRASIYGGHFADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALEKLEACGVEGGRPSVYIQASYTKLPAVGADDLALLPCYHHACHLLTVHPSGILRT 285
BLAST of mRNA_E-fasciculatus_F_contig1002.36.1 vs. uniprot
Match: A0A6H5JFC7_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC7_9PHAE) HSP 1 Score: 325 bits (832), Expect = 1.100e-100 Identity = 177/268 (66.04%), Postives = 186/268 (69.40%), Query Frame = 1 Query: 397 EEGNEEKDGRDRAVGFQFKEVGTLANRAKNPV-----------------------------------------------VFLDVSIGGIPARLTFELRKDIVPRTAENFRSICAGDRADTEDGTRLSYQGCVFHRIIKDFAVIGGDIAVTTADTQKYFALPVPRNRPGSHIEHDGTGRASIYGGPFADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALDKLEACGVEGGRPSLYIQASRVMM 1059
+E NEEK+GR RAVGFQFKEVGTLANRAKNPV +FLDVSIGG+PARLTFELRKDIVPRTAENFRSICAGDR +DGTRLSYQGCVFHR+IKDFAVIGGDIA HDGTG ASIYGG FADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDAL+KLEA G EGGRPS+YIQAS M+
Sbjct: 21 QEENEEKEGRGRAVGFQFKEVGTLANRAKNPVGERYRDVGTYADVVGVPARHVNPGHTPVHSLRARPPGNWGSKTNARHLFLDVSIGGVPARLTFELRKDIVPRTAENFRSICAGDR---QDGTRLSYQGCVFHRVIKDFAVIGGDIA-----------------------RHDGTGIASIYGGHFADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALEKLEASGAEGGRPSVYIQASNAML 262
BLAST of mRNA_E-fasciculatus_F_contig1002.36.1 vs. uniprot
Match: A0A7S3Y1Y7_HETAK (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1Y7_HETAK) HSP 1 Score: 194 bits (492), Expect = 5.400e-57 Identity = 96/193 (49.74%), Postives = 123/193 (63.73%), Query Frame = 1 Query: 475 RAKNPVVFLDVSIGGIPA-RLTFELRKDIVPRTAENFRSICAGDRADTEDGTRLSYQGCVFHRIIKDFAVIGGDIAVTTADTQKYFALPVPRNRPGSHIEHDGTGRASIYGGPFADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALDKLEACGVEGGRPSLYIQASR 1050
R N +++ D++I G A RLTFELR DI P+T ENF+++ G+R TEDG +LSY+G VFHRI+KD+ + GGDI + DGTGR S +G PF DENF+LRHTGPGVL+ CN+GPD+N S F IT VE PWL+GR V FGCL + S D L K+E G + GRPS + +R
Sbjct: 20 RHLNNIMYFDMTIDGEDAGRLTFELRADIAPKTCENFKALITGERGITEDGVKLSYEGSVFHRIVKDYLIQGGDI-----------------------VNQDGTGRLSSFGEPFEDENFILRHTGPGVLSMCNSGPDSNGSQFFITLVETPWLDGRHVVFGCLVDQPSLDTLAKIEQVGHDCGRPSRTVVVAR 189
BLAST of mRNA_E-fasciculatus_F_contig1002.36.1 vs. uniprot
Match: A0A7S2GBA6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GBA6_9STRA) HSP 1 Score: 165 bits (417), Expect = 2.120e-45 Identity = 85/200 (42.50%), Postives = 118/200 (59.00%), Query Frame = 1 Query: 442 FQFKEVGTLANRAKNPVVFLDVSIGGIPA-RLTFELRKDIVPRTAENFRSICAGDRADTEDGTRLSYQGCVFHRIIKDFAVIGGDIAVTTADTQKYFALPVPRNRPGSHIEHDGTGRASIYGGP----FADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALDKLEACGVEGGRP 1026
+Q +E +R+ NP+V+LD+SIG P+ RL ELR D+VPR AENFRS+C G+ +DGT + ++G +FHRI+KD GGD++ + DGT AS++ FADENF+LRHTGPGVL+ N+GPDTN S F ++ VE W++ V FGC+ N +S L +E G + GRP
Sbjct: 37 YQHQEGAQKGDRSLNPIVYLDISIGNEPSGRLMIELRADLVPRAAENFRSLCTGEHPKHKDGTAMHFKGTMFHRIVKDSLCQGGDLS-----------------------QGDGTWSASVFRDNADCLFADENFILRHTGPGVLSMANSGPDTNGSQFYLSFVETAWMDEHHVVFGCVCNQDSLTVLYDIERQGSQSGRP 213
BLAST of mRNA_E-fasciculatus_F_contig1002.36.1 vs. uniprot
Match: A0A7S2VS52_9DINO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VS52_9DINO) HSP 1 Score: 162 bits (411), Expect = 9.640e-45 Identity = 86/201 (42.79%), Postives = 114/201 (56.72%), Query Frame = 1 Query: 433 AVGFQFKEVGTLANRA-KNPVVFLDVSIGGIPA-RLTFELRKDIVPRTAENFRSICAGDRADTEDGTRLSYQGCVFHRIIKDFAVIGGDIAVTTADTQKYFALPVPRNRPGSHIEHDGTGRASIYGGPFADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALDKLEACGVEGGRPS 1029
AV + G RA NP VF+D++IGG A R+ ELR+D+ PRTAENFR +C G+R G +LS +G FHR+++DF GGD DGTG S+YGG FADENF L+H GPGVL+ N GP+TNSS F ITT + PWL+G+ V FG + + D + K++ C G+P+
Sbjct: 20 AVARWWVAAGAEGRRAMSNPQVFMDITIGGESAGRIVLELRRDVAPRTAENFRCLCTGERGVGVSGKKLSLKGSRFHRVLEDFVCQGGDFT-----------------------REDGTGGESVYGGRFADENFELKHGGPGVLSMANGGPNTNSSQFFITTRKTPWLDGKHVVFGSVV--QGMDVVAKIQGCATLSGKPT 195
BLAST of mRNA_E-fasciculatus_F_contig1002.36.1 vs. uniprot
Match: C3YR41_BRAFL (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YR41_BRAFL) HSP 1 Score: 160 bits (405), Expect = 2.150e-44 Identity = 82/177 (46.33%), Postives = 107/177 (60.45%), Query Frame = 1 Query: 493 VFLDVSIGGIPA-RLTFELRKDIVPRTAENFRSICAGDRADTEDGTRLSYQGCVFHRIIKDFAVIGGDIAVTTADTQKYFALPVPRNRPGSHIEHDGTGRASIYGGPFADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALDKLEACGVEGG 1020
VF D++IGG PA R+ FELR D+VP+TAENFR++C G++ G L Y+G +FHR I F V GGDI ++G+G SIYGG F DENF L HTGPG+L+ NAGPDTN S F IT V+ PWL+G+ V FG + + +D ++K+EA G G
Sbjct: 2 VFFDITIGGTPAGRIVFELRADVVPKTAENFRALCTGEKGRGTWGEPLHYKGVIFHRCIPGFMVQGGDIQF-----------------------NNGSGGESIYGGDFPDENFKLNHTGPGILSMANAGPDTNGSQFFITVVQTPWLDGKHVVFGKVI--QGYDVVEKIEAAGSPSG 153
BLAST of mRNA_E-fasciculatus_F_contig1002.36.1 vs. uniprot
Match: A0A812VDW2_9DINO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812VDW2_9DINO) HSP 1 Score: 162 bits (409), Expect = 3.330e-44 Identity = 84/191 (43.98%), Postives = 112/191 (58.64%), Query Frame = 1 Query: 460 GTLANRAKNPVVFLDVSIGGIPA-RLTFELRKDIVPRTAENFRSICAGDRADTEDGTRLSYQGCVFHRIIKDFAVIGGDIAVTTADTQKYFALPVPRNRPGSHIEHDGTGRASIYGGPFADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALDKLEACGVEGGRPS 1029
GT+A PVVF D+SIGG PA R+T ELR D+ P+TAENFR++C G++ + G L ++G FHR+I DF GGD +GTG SIYG FADENF L+HTGPG+L+ NAGP+TN S F + TV+ WL+G+ V FG + + D + K+EA G + G+ S
Sbjct: 53 GTIA--MAKPVVFFDMSIGGTPAGRITMELRADVAPKTAENFRALCTGEKGTGKSGKPLHFKGSAFHRVIPDFMCQGGDFTAG-----------------------NGTGGESIYGSKFADENFTLKHTGPGILSMANAGPNTNGSQFFLCTVKTQWLDGKHVVFGSVT--DGMDVVKKIEAVGSQSGKTS 216
BLAST of mRNA_E-fasciculatus_F_contig1002.36.1 vs. uniprot
Match: A0A8B7BTP3_PHODC (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7BTP3_PHODC) HSP 1 Score: 160 bits (404), Expect = 3.530e-44 Identity = 82/185 (44.32%), Postives = 108/185 (58.38%), Query Frame = 1 Query: 478 AKNPVVFLDVSIGGIPA-RLTFELRKDIVPRTAENFRSICAGDRADTEDGTRLSYQGCVFHRIIKDFAVIGGDIAVTTADTQKYFALPVPRNRPGSHIEHDGTGRASIYGGPFADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALDKLEACGVEGGRPS 1029
A NP+V+LDV+I G+PA R+ EL D+ P+TAENFR++C G++ G L Y+GC FHR+I F GGD +GTG SIYGG FADENFV +HTGPGV++ N+GP+TN S F I T + PWL+GR V FG + + D + +E G +GGR S
Sbjct: 2 ASNPMVYLDVTINGVPAGRIVIELFADVTPKTAENFRALCTGEKGLGRSGKPLHYKGCPFHRVIPGFVSQGGDFTAG-----------------------NGTGGXSIYGGKFADENFVKKHTGPGVVSMANSGPNTNGSQFFICTTKTPWLDGRHVVFGHVV--DGMDVVRAMEEVGSQGGRTS 161
BLAST of mRNA_E-fasciculatus_F_contig1002.36.1 vs. uniprot
Match: A0A196SPU3_BLAHN (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SPU3_BLAHN) HSP 1 Score: 160 bits (406), Expect = 4.050e-44 Identity = 84/188 (44.68%), Postives = 105/188 (55.85%), Query Frame = 1 Query: 466 LANRAKNPVVFLDVSIGGIP-ARLTFELRKDIVPRTAENFRSICAGDRADTEDGTRLSYQGCVFHRIIKDFAVIGGDIAVTTADTQKYFALPVPRNRPGSHIEHDGTGRASIYGGPFADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALDKLEACGVEGGRP 1026
A+RA NP+VF+D S GG R+ FELR D+VP+TAENFR +C G++ + G +L Y+GC HR+I F GGD +GTG SIYG F DENF L+HTGPG+L+ N GP+TN S F ITTV PWLNG V FG + + + L LE G E G P
Sbjct: 22 FASRADNPLVFMDFSAGGKDMGRIVFELRADVVPKTAENFRCLCTGEKGVGKSGKKLHYKGCTLHRVIPQFMCQGGDFT-----------------------NGNGTGGESIYGERFPDENFTLKHTGPGLLSMANCGPNTNGSQFFITTVPCPWLNGHHVVFGEVK--KGMNVLKSLEMLGTESGSP 184
BLAST of mRNA_E-fasciculatus_F_contig1002.36.1 vs. uniprot
Match: A0A835YME2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YME2_9STRA) HSP 1 Score: 160 bits (406), Expect = 5.300e-44 Identity = 90/191 (47.12%), Postives = 110/191 (57.59%), Query Frame = 1 Query: 469 ANRAKNPVVFLDVSIGGIPA-RLTFELRKDIVPRTAENFRSICAGDRA-DTEDGTRLSYQGCVFHRIIKDFAVIGGDIAVTTADTQKYFALPVPRNRPGSHIEHDGTGRASIYGGP--FADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALDKLEACGV-EGGRP 1026
A RA NP+VF+D++I G PA R ELR DI P AENFR + G+R + L Y+G +FHRI D A+ GGD+ + DGTGR S F DENF LRHTGPGVL+CCN+GPDTN S FM+T V+ PWL+G+ V FG L ES+ ALD + G EGGRP
Sbjct: 7 APRAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVE-----------------------KGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLIGEESYKALDAVRRSGGDEGGRP 174 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1002.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1002.36.1 >prot_E-fasciculatus_F_contig1002.36.1 ID=prot_E-fasciculatus_F_contig1002.36.1|Name=mRNA_E-fasciculatus_F_contig1002.36.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=280bp MFRRRQFHTKPTASDSLGGAKALRDTKEEGNEEKDGRDRAVGFQFKEVGTback to top mRNA from alignment at E-fasciculatus_F_contig1002:89..4716+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1002.36.1 ID=mRNA_E-fasciculatus_F_contig1002.36.1|Name=mRNA_E-fasciculatus_F_contig1002.36.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4628bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1002:89..4716+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1002:89..4716+ >mRNA_E-fasciculatus_F_contig1002.36.1 ID=mRNA_E-fasciculatus_F_contig1002.36.1|Name=mRNA_E-fasciculatus_F_contig1002.36.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1680bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1002:89..4716+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |