mRNA_E-fasciculatus_F_contig10012.32.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-fasciculatus_F_contig10012.32.1
Unique Name	mRNA_E-fasciculatus_F_contig10012.32.1
Type	mRNA
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)

Homology

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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: D7FUN0_ECTSI (Anamorsin homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN0_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 4.780e-142
Identity = 244/281 (86.83%), Postives = 251/281 (89.32%), Query Frame = 1

Query:  169 MEVEEPPLSLAPAPAGSKALVVCRRGSEEASSAQQWASRSRSDGATVSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQARGVVKLLKAGGKVNVAASSQGGEAAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNG-SXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
            MEV+EPPLS APAPAGSKALVVCRR SEEASSAQQWASRSRSDG +VSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQ   VVKLLKAGG +NVAASSQGGEAAAAALKRALTFAGFL VAANPED  VLSGERAAWETGASAPVRLSFGASKN SRNGTNGNG + XXXXXX +KTWKLA+D       XXXXX LIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEM+GG       AAGPLPVVSVGD VDDALTSACGNCSK
Sbjct:    1 MEVDEPPLSFAPAPAGSKALVVCRRDSEEASSAQQWASRSRSDGTSVSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQ---VVKLLKAGGNINVAASSQGGEAAAAALKRALTFAGFLNVAANPEDPRVLSGERAAWETGASAPVRLSFGASKNDSRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXXLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGD-VDDALTSACGNCSK 277

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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A6H5KDK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK2_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.750e-34
Identity = 101/136 (74.26%), Postives = 102/136 (75.00%), Query Frame = 1

Query:  424 VVKLLKAGGKVNVAASSQGGE-AAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXD-LIDEDALLESSAPVKRASET 825
            VVKLLKAGG VNVAAS +GGE AAAAALKRALTFAGF        D  VLS ERAAWETGASAPVRLSFGASKNGSRNGTNGNG XXXXXXX                 XXXXX  LIDEDALLESSAPVKRASET
Sbjct:    4 VVKLLKAGGNVNVAASPEGGEVAAAAALKRALTFAGFXXXXXXXXDPRVLSAERAAWETGASAPVRLSFGASKNGSRNGTNGNGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIDEDALLESSAPVKRASET 139

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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: W7TKP2_9STRA (Anamorsin homolog n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKP2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.340e-13
Identity = 66/185 (35.68%), Postives = 83/185 (44.86%), Query Frame = 1

Query:  478 GGEAAAAALKRALTFAGFLKVAANP---EDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPV-----KRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
            G E   A +K  L  AGF+ V   P     S  L   +  WE GA+A V L                G         + TW+L   DGE G       +LID D+LLE +  +     KRA    G GC TK+RACK+CSCGRAE E   G           LPV+S  ++  +A  S+CGNC K
Sbjct:   97 GKEETCAGMKMQLLLAGFVDVEVLPASASSSASLIAHKPQWEVGAAASVSLPVSLPXXXXXXXXXXTGQS-------AATWRLTDVDGEGGEEGGAEGELIDPDSLLEDAEVMAGLAAKRAEREQGQGCETKKRACKNCSCGRAEQEEGRGGVA--------LPVMS--EEELEASVSSCGNCYK 264

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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A836CCA2_9STRA (Anamorsin homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCA2_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.060e-13
Identity = 91/281 (32.38%), Postives = 130/281 (46.26%), Query Frame = 1

Query:  196 LAPAPAGSKALVVCRRGSEEASSAQQWASRSRSDGATVSVCPPGHLESHARANAGAYDTIVVEEAG---EGAVLGQARGVVKLLKAGGKVNVAASSQGGEAAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXP----SKTWKLAMDDGEEGAGXXXXXDLIDEDALLE--SSAPVKRASETAGDG-CATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
            LAP  AG KA+VV    S +     +W S + S   +  V P       A A     +++++E+     + A+LG+A G    L +GG++ V  S  G E+    +   L  +GF+     PE    +   + AWE GASA ++    A          GNG+            +  WK+A++D  E         L+DEDALLE     P+KRA+  A  G C+TK+RACK+CSCGRAE+E  G        A  P P        D   +SACGNC +
Sbjct:   11 LAPLTAGHKAIVVSE--SADGGKLSEWCSNNDS---SFVVSP------QAAAGVKNVNSVIIEDPLLLLDDALLGRALGA---LASGGRLLVLGS--GSES----VSSKLVLSGFVDARVTPEG---VEAFKPAWEAGASAQLKFKPKA----------GNGAVSKPQQQQKAAVATAWKVALNDLAEDDFAESDGGLVDEDALLEVAGDVPLKRATPAADAGDCSTKKRACKNCSCGRAELEAAG--------APAPPPE-------DGPGSSACGNCYR 243

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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: DRE2_MONBE (Anamorsin homolog n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=DRE2_MONBE)

HSP 1 Score: 59.3 bits (142), Expect = 2.130e-6
Identity = 53/171 (30.99%), Postives = 75/171 (43.86%), Query Frame = 1

Query:  499 ALKRALTFAGFLKV-AANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXD-LID-EDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNC 1002
            AL+ ALT  GF+ V  +  E +     ++  +E GA+AP++LSF   K                    ++ W +A DD ++        D L+D ED  L ++AP     E    G   KRRACK+C+CGRA+ E             GPLP             S+CGNC
Sbjct:  103 ALRSALTMGGFVNVQVSTSEHALEAHADKPVYEVGAAAPLKLSFAKKKQS---------GAAAPAAQVAEVWTIATDDFDDDDLLENDGDELLDAEDLALATTAPEGDDCEVGAGG---KRRACKNCTCGRADAEAE---QAAKPTLTGPLPA------------SSCGNC 246

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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: L1JNK9_GUITC (Anamorsin homolog n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JNK9_GUITC)

HSP 1 Score: 58.9 bits (141), Expect = 2.430e-6
Identity = 53/167 (31.74%), Postives = 77/167 (46.11%), Query Frame = 1

Query:  514 LTFAGFLKVAANPEDSCVL--SGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASETAGDGCATK--RRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNC 1002
            L FAGF+    N  D  ++  S  +  WE G++ P  LS   SK  ++                 K WK++ D+ +E         ++DED+LL S   +K A + A D C     R+ACK+C+CGRAEME NGG       AA   P  + G+ +     + C  C
Sbjct:   98 LIFAGFVDTTENDGDGVMVETSAIKPPWEVGSAVP--LSIKRSKQEAQE--------------TKKVWKVSADEDDE---------IMDEDSLL-SEKDLKAAPKPASD-CELSGGRKACKNCTCGRAEMEENGGK------AAAAAPTSACGNRLGCDFENCCAQC 231

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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: D8R8D5_SELML (Anamorsin homolog n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R8D5_SELML)

HSP 1 Score: 58.9 bits (141), Expect = 3.030e-6
Identity = 64/213 (30.05%), Postives = 92/213 (43.19%), Query Frame = 1

Query:  424 VVKLLKAGGKVNVAASSQGGEAAAAALKRALTFAGFLKVAA----------------NPEDSCVLSGERAAWETGASAPV-RLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASETAGDGCATK---RRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNC 1002
            V ++LK GG + V  S        AA++R+L  AGF+ +                  +  DS +L  ++ AWE G S P+ R +  A           NGS          +WKL   D +E        DL+DED+LL +   +KR    A D C      R+ACK+C+CGRAE+E  G            LP     D++ +   S CG+C
Sbjct:   75 VSRVLKPGGILVVRTSED-----KAAVQRSLVLAGFVSIETMEPVEGLSLADGLSGISLSDSVLLRAQKPAWEAGVSFPIKRKAVAAQDTAVERAVTSNGSSAIA------SWKLPTVDLDED-----DFDLVDEDSLL-TEEDLKRPELPAADDCEVGNAGRKACKNCTCGRAELEEEG-----------KLP-----DELLNNPISQCGSC 254

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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A836GQ73_9TRYP (CIAPIN1 domain-containing protein n=1 Tax=Leishmania martiniquensis TaxID=1580590 RepID=A0A836GQ73_9TRYP)

HSP 1 Score: 55.8 bits (133), Expect = 3.270e-6
Identity = 37/82 (45.12%), Postives = 44/82 (53.66%), Query Frame = 1

Query:  766 LIDEDALL-ESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
            + DEDALL E    VKRA  T G+ C T+RRACK+C CGRAE+E           A G LP   +     +     CGNCSK
Sbjct:   20 VADEDALLTEEDRVVKRA--TKGEDCTTRRRACKNCVCGRAELERK-------LDAEGKLPPEGI-----EMPPGGCGNCSK 87

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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A024GTM7_9STRA (Anamorsin homolog n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GTM7_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 6.830e-6
Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1

Query:  703 KTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASET-AGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
            K WKL     EEG       + IDED+LL+++  V++A++   G     KRRACK+C+CGRAE E+          A+GP+    V D     + S+CGNC K
Sbjct:  167 KKWKLT----EEG------DEFIDEDSLLDNTEEVRKAAKNDCGVSANGKRRACKNCTCGRAETEI----------ASGPV----VSDQELSQMVSSCGNCFK 245

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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A087SQ00_AUXPR (Anamorsin homolog n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SQ00_AUXPR)

HSP 1 Score: 55.8 bits (133), Expect = 1.210e-5
Identity = 53/173 (30.64%), Postives = 78/173 (45.09%), Query Frame = 1

Query:  487 AAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCS 1005
            A+ A L++ LT AG    +A P DS V S  + AWETGA A + L                          +  WKL++DD ++        D+ID++ LL +   V+ A   AG G A  + ACK+C+CGRAE             A  P+ +      + +  TS CG+C+
Sbjct:   28 ASPAGLQKNLTLAGLGTASAGPLDSVVSS--KPAWETGARAAISL-----------------RKKPAAVQAAPAWKLSVDDEDD--------DIIDDEQLLTAEDLVRPAPAAAGCGPAASK-ACKNCTCGRAE-------------ATEPVKLTKA---MLEKPTSGCGSCA 156

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 16

ZOOM

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POSITION

0


Match Name	E-value	Identity	Description
D7FUN0_ECTSI	4.780e-142	86.83	Anamorsin homolog n=1 Tax=Ectocarpus siliculosus T...	[more]
A0A6H5KDK2_9PHAE	1.750e-34	74.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
W7TKP2_9STRA	1.340e-13	35.68	Anamorsin homolog n=3 Tax=Monodopsidaceae TaxID=42...	[more]
A0A836CCA2_9STRA	2.060e-13	32.38	Anamorsin homolog n=1 Tax=Tribonema minus TaxID=30...	[more]
DRE2_MONBE	2.130e-6	30.99	Anamorsin homolog n=1 Tax=Monosiga brevicollis Tax...	[more]
L1JNK9_GUITC	2.430e-6	31.74	Anamorsin homolog n=1 Tax=Guillardia theta (strain...	[more]
D8R8D5_SELML	3.030e-6	30.05	Anamorsin homolog n=2 Tax=Selaginella moellendorff...	[more]
A0A836GQ73_9TRYP	3.270e-6	45.12	CIAPIN1 domain-containing protein n=1 Tax=Leishman...	[more]
A0A024GTM7_9STRA	6.830e-6	38.83	Anamorsin homolog n=2 Tax=Albugo candida TaxID=653...	[more]
A0A087SQ00_AUXPR	1.210e-5	30.64	Anamorsin homolog n=1 Tax=Auxenochlorella protothe...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	416.0
Seed ortholog evalue	1.7e-113
Seed eggNOG ortholog	2880.D7FUN0
Preferred name	DRE2
GOs	GO:0000003,GO:0001505,GO:0002064,GO:0002065,GO:0002066,GO:0002376,GO:0002520,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005829,GO:0006091,GO:0006790,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0008150,GO:0008152,GO:0009055,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010941,GO:0016043,GO:0016226,GO:0016491,GO:0019222,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022900,GO:0030097,GO:0030154,GO:0030707,GO:0030855,GO:0031163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044572,GO:0044703,GO:0045019,GO:0045428,GO:0048037,GO:0048468,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051704,GO:0055114,GO:0060429,GO:0060548,GO:0065007,GO:0065008,GO:0070013,GO:0071840,GO:0080134,GO:0080135,GO:1900407,GO:1900408,GO:1901031,GO:1901032,GO:1901298,GO:1901299,GO:1902882,GO:1902883,GO:1903201,GO:1903202,GO:1903205,GO:1903206,GO:1903426,GO:1903427,GO:1904406,GO:2000377,GO:2000378,GO:2001023,GO:2001024,GO:2001038,GO:2001039
EggNOG free text desc.	metallo-sulfur cluster assembly
EggNOG OGs	COG5636@1,KOG4020@2759
COG Functional cat.	E
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	Anamorsin
Ec32 ortholog	Ec-26_002090.1
Exons	4
Model size	1008
Cds size	1008
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig10012.32.1	prot_E-fasciculatus_F_contig10012.32.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	polypeptide	E-fasciculatus_F_contig10012 873..4417 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927503.7320933-CDS-E-fasciculatus_F_contig10012:872..1055	1622927503.7320933-CDS-E-fasciculatus_F_contig10012:872..1055	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig10012 873..1055 +
1695995566.6662104-CDS-E-fasciculatus_F_contig10012:872..1055	1695995566.6662104-CDS-E-fasciculatus_F_contig10012:872..1055	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig10012 873..1055 +
1622927503.744471-CDS-E-fasciculatus_F_contig10012:2527..2767	1622927503.744471-CDS-E-fasciculatus_F_contig10012:2527..2767	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig10012 2528..2767 +
1695995566.6784062-CDS-E-fasciculatus_F_contig10012:2527..2767	1695995566.6784062-CDS-E-fasciculatus_F_contig10012:2527..2767	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig10012 2528..2767 +
1622927503.7589889-CDS-E-fasciculatus_F_contig10012:3046..3448	1622927503.7589889-CDS-E-fasciculatus_F_contig10012:3046..3448	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig10012 3047..3448 +
1695995566.6982682-CDS-E-fasciculatus_F_contig10012:3046..3448	1695995566.6982682-CDS-E-fasciculatus_F_contig10012:3046..3448	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig10012 3047..3448 +
1622927503.7738397-CDS-E-fasciculatus_F_contig10012:4234..4417	1622927503.7738397-CDS-E-fasciculatus_F_contig10012:4234..4417	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig10012 4235..4417 +
1695995566.7074575-CDS-E-fasciculatus_F_contig10012:4234..4417	1695995566.7074575-CDS-E-fasciculatus_F_contig10012:4234..4417	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig10012 4235..4417 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-fasciculatus_F_contig10012:873..4417+
coding sequence from alignment at E-fasciculatus_F_contig10012:873..4417+

protein sequence of mRNA_E-fasciculatus_F_contig10012.32.1

>prot_E-fasciculatus_F_contig10012.32.1 ID=prot_E-fasciculatus_F_contig10012.32.1|Name=mRNA_E-fasciculatus_F_contig10012.32.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=336bp
MSSSRKPALLATVVALGLITAAVCYNKQAARRRSSTGDADTAAAAAAAAA
DEQRSVMEVEEPPLSLAPAPAGSKALVVCRRGSEEASSAQQWASRSRSDG
ATVSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQARGVVKLLKAGG
KVNVAASSQGGEAAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETG
ASAPVRLSFGASKNGSRNGTNGNGSAAAAAAAPSKTWKLAMDDGEEGAGG
EEDDDLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMN
GGGSNNNGGAAGPLPVVSVGDDVDDALTSACGNCSK

mRNA from alignment at E-fasciculatus_F_contig10012:873..4417+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-fasciculatus_F_contig10012.32.1 ID=mRNA_E-fasciculatus_F_contig10012.32.1|Name=mRNA_E-fasciculatus_F_contig10012.32.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3545bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10012:873..4417+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCCTCGTCTCGAAAGCCGGCTTTGTTGGCCACCGTGGTTGCCCTGGG
CCTCATCACCGCAGCGGTGTGCTACAACAAACAGGCCGCTCGCCGCCGGA
GCAGCACAGGCGACGCCGATACAGCAGCAGCAGCAGCAGCGGCAGCAGCG
GACGAGCAGAGATCAGTGATGGAGGTAGAGGAGGTGAGAAGAAAGTGCAG
AGTACATGGCAGTGGCGTCGAGTATTACTTCAATTCGAGCAAAATCGAAG
GGGCAACGAGGAGGGCCGGTGGATTGCGTTTGAACGTTTGAACCACAGAG
CCAGAGCCAGGTTTTGTGCGGAGGCTCTGCGGGCCGTTTCGAAAATCGAA
CCTTCCACCTTGCTTGTACGTAGAAATCCTATTGTATCCCACCAAGTGTG
TGGGCTGTGGGTATCGCCGGGTGTGCGTTACACACACAGCGGTGGGGGGG
GACCGAAGGTCTATTAGAGGCGCTCCCATGGGCGAAAGGGATCATACAGC
TCGCACTGGGTTGTATTTTCATGTACATTTGTATTTGAAATATATTACAC
TTAAGTACATCCGGTCCAAGGGTGTGTGTGCTGTCTTACACAACCTCCGG
TATACTACGTGCCCGGTTGGCGGGCACCGAAGTGGCGGCGGCCCCAATGC
TGCTACGGTCATATGCTAGCATGCAAGCAAGATCCTCGCTACCTTTCCCG
GCGCCAGAGCAACAGCATTCGCGTCAGGAAGTAATGGCGGCGGGGGCGGA
AGGGTTGGGAATCGATATGTACTGCTGGCTAGCAGCGGAGGGCCCGTTCG
GCCGGCGCCGCAGGCGCGGATTGCCCGCTGCGGCCGCTGCCCCGCGGGGC
AGCGGCGGGTGGACTTGCCGTGGGATTCGACCACGAGCACGGGCTAGGCA
TGGACGTTCTTTTTCCTGGACTCTGCCTTGTCTTTTGAGAGTTTTTTTGT
TGTTGGAGAAGGGAATATGCCAGAGTTTCAAGTAGCTTGGGGGGGATCTG
CAGCTGGGACTGTAGCGTTCCGTGCTGGAACTCGTTCCCGATGGGATGGG
CTCCCGACCATGCTGCTGGATGTTGCGACTCTCTTGGGTCGTTAAGACGA
TACGCTAAGAGATGAGTGATACCAGCTGACACAAACAGCAGTCTTGCTGA
GCCTGTCGAACAACAGAGGAGACATGGTGTCACTGCGGTGTGGACGTCTC
GCGAGGATCAAACAGAGAGACGCAAGCAGTCGTGCAGATACTACTGCTGT
ACGAATCCAACGCGACCCTATCCTCTGTAGGGTTATGTTTTTCCGGGAAT
ATGTTTGTATCCGTACCCGACGCTTGTGTGAGTGCTGTGACACTTCCGAA
ACCCTACCCGGAGATAATTTCCGAAAGAGAAAAAAAAAACGGGTTGTCAT
TGTTCTTGAGCCAGCGCAGTTGATATTCTTCGGCCATCTTTTTACAGTCT
CTGCAAACATTGTCCACACAAAACACGCACCACGGGAGACCCCACATCTC
CGAACACCGTTACATGCGTTGCCTGCTGTGCCGTCTCTGCTGCTGCGGCG
TTTCTTACCACACTTTACAAATATCATTTTTGTCCGCCATGACGCCCTCT
TCCCTCTGCCGGCGCTAAAACTGCGATACCCCCCCCCCCCCCCTGCCCGC
CGCAGCCGCCGCTGTCCCTCGCGCCGGCCCCGGCGGGCTCCAAGGCCCTC
GTGGTCTGCAGAAGGGGTTCCGAGGAGGCGTCGTCGGCGCAGCAGTGGGC
GTCGCGATCCAGGAGCGATGGCGCGACCGTGAGCGTGTGCCCCCCGGGCC
ACCTGGAGTCGCACGCCCGGGCGAACGCGGGGGCGTACGACACGATCGTG
GTGGAGGAGGCCGGGGAAGGAGCCGTGCTTGGGCAGGCGAGAGGCGTTTT
GGGGGGGGCTGACCCGGGGGGGGCGGCTGTCAAGTGCTCGTTGAGTGGGG
AGGGGGGATGGGGGCAGGCTTATTGGATCTAAGGTGTTGTCGGCACTTCG
TTGTTATCCATGGGAAGTGTTTCGTGATGGAGAACTGCTGTGTTGCGATG
GATAAGAGAGGTATGTGTGTATCCCGCCTCTGCTGCTGCTGGACCACCGC
CCTTCCCGGCGTTGACTCCACAATAAACCCCCCCCCCTCTCCCCCCAATT
CATCAAAATTGACGGTGTTTTCAGGTCGTGAAGCTGCTCAAGGCCGGTGG
TAAGGTCAACGTGGCAGCCTCCTCTCAAGGCGGCGAAGCCGCCGCCGCCG
CCCTCAAACGCGCCCTCACCTTCGCGGGATTCCTTAAAGTCGCTGCCAAC
CCGGAAGACTCCTGTGTCCTTAGTGGGGAGCGGGCGGCGTGGGAGACGGG
AGCATCGGCGCCGGTTCGCCTCTCGTTCGGCGCGTCGAAGAACGGTTCGC
GGAACGGTACCAACGGGAACGGGTCAGCGGCGGCGGCGGCGGCGGCCCCG
AGCAAGACGTGGAAGCTGGCGATGGATGATGGAGAGGAAGGGGCTGGGGG
TGAGGAGGATGACGATCTTATCGACGAGGACGCTCTGCTGGAGAGCTCGG
CCCCCGTCAAGCGGGCGAGCGAAACGGTGAGGATACGGGGGGGGCAAGTA
TTTTTTTATCTACCGTGGCGAACGCGAACGCTCGGCCGTTGTAGATCAAG
TTGGCTGGCTTCTGTTCACCGCTGCGGATGTTGTTTGGTGCTACTTGGTT
GATATCCTGGCGGTCTACCCCACTCAAGAAATCCCCATGTGAAGAGGTTG
CATTCCTTAGGCGAGTTTATCTCACAAGCTTTGGTACAGGTGGCAAGTAA
TGCCTTGCGTCGGTCTCGCGAATACTGATTTCTTGGACCAGGTGAGAGCT
TGCGCCCACACTAAAATTCACCTGCTAGTAGGTTCTAGAGAGGGAGAGGT
TGGGATGTGTTTTCGGTTGGTTGTTTTGAGCTATTCTTGTCTTGCAGCTC
TTTGCTCATAGTGGTTGTCGCCATTTGAACACTTCCTTCCCTGGCCCCTG
AACTCTTATCCGTACATGCTCTATGTGCGTGCCTCTCCCGTATCGGCCGT
TTTGACATATCTTGGGGTTTAGCGTGTGGAATGCTCACGGTAGTCGGGTG
TGTATGCCGGCAGAGGTGTTGGTTGAGTATTTTTGAAAATAACATCAAAT
TTGTTTTTCAAGAGTAAAACTCTCTTGGCAAGAAATGAAATGAAAAGTGC
TTGGGTACTCAGAGTTGGCGCGGGCTGTCTCCACAAGTGTGTCGCCCGAG
CAGTTGTGGTGCGTAAGCAGCAGTGACCGCTGACGAACGTGGACAATCAG
AGCACGTCAATCGGTATTTACAACACCGTTTTACCGTCGTCCTCCGCATG
CATCCTTCACAGGCCGGCGACGGCTGCGCCACCAAGCGACGAGCGTGCAA
AGACTGCTCCTGCGGCCGTGCCGAGATGGAGATGAACGGGGGGGGCAGCA
ACAACAACGGCGGCGCCGCGGGGCCCCTGCCGGTGGTGTCCGTCGGGGAC
GACGTCGACGATGCCCTCACTTCCGCCTGCGGCAACTGCTCCAAG

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10012:873..4417+

>mRNA_E-fasciculatus_F_contig10012.32.1 ID=mRNA_E-fasciculatus_F_contig10012.32.1|Name=mRNA_E-fasciculatus_F_contig10012.32.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2016bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10012:873..4417+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCCTCGTCTCGAAAGCCGGCTTTGTTGGCCACCGTGGTTGCCCTGGG
CCTCATCACCGCAGCGGTGTGCTACAACAAACAGGCCGCTCGCCGCCGGA
GCAGCACAGGCGACGCCGATACAGCAGCAGCAGCAGCAGCGGCAGCAGCG
GACGAGCAGAGATCAGTGATGGAGGTAGAGGAGATGTCCTCGTCTCGAAA
GCCGGCTTTGTTGGCCACCGTGGTTGCCCTGGGCCTCATCACCGCAGCGG
TGTGCTACAACAAACAGGCCGCTCGCCGCCGGAGCAGCACAGGCGACGCC
GATACAGCAGCAGCAGCAGCAGCGGCAGCAGCGGACGAGCAGAGATCAGT
GATGGAGGTAGAGGAGCCGCCGCTGTCCCTCGCGCCGGCCCCGGCGGGCT
CCAAGGCCCTCGTGGTCTGCAGAAGGGGTTCCGAGGAGGCGTCGTCGGCG
CAGCAGTGGGCGTCGCGATCCAGGAGCGATGGCGCGACCGTGAGCGTGTG
CCCCCCGGGCCACCTGGAGTCGCACGCCCGGGCGAACGCGGGGGCGTACG
ACACGATCGTGGTGGAGGAGGCCGGGGAAGGAGCCGTGCTTGGGCAGGCG
AGAGGCCCGCCGCTGTCCCTCGCGCCGGCCCCGGCGGGCTCCAAGGCCCT
CGTGGTCTGCAGAAGGGGTTCCGAGGAGGCGTCGTCGGCGCAGCAGTGGG
CGTCGCGATCCAGGAGCGATGGCGCGACCGTGAGCGTGTGCCCCCCGGGC
CACCTGGAGTCGCACGCCCGGGCGAACGCGGGGGCGTACGACACGATCGT
GGTGGAGGAGGCCGGGGAAGGAGCCGTGCTTGGGCAGGCGAGAGGCGTCG
TGAAGCTGCTCAAGGCCGGTGGTAAGGTCAACGTGGCAGCCTCCTCTCAA
GGCGGCGAAGCCGCCGCCGCCGCCCTCAAACGCGCCCTCACCTTCGCGGG
ATTCCTTAAAGTCGCTGCCAACCCGGAAGACTCCTGTGTCCTTAGTGGGG
AGCGGGCGGCGTGGGAGACGGGAGCATCGGCGCCGGTTCGCCTCTCGTTC
GGCGCGTCGAAGAACGGTTCGCGGAACGGTACCAACGGGAACGGGTCAGC
GGCGGCGGCGGCGGCGGCCCCGAGCAAGACGTGGAAGCTGGCGATGGATG
ATGGAGAGGAAGGGGCTGGGGGTGAGGAGGATGACGATCTTATCGACGAG
GACGCTCTGCTGGAGAGCTCGGCCCCCGTCAAGCGGGCGAGCGAAACGGT
CGTGAAGCTGCTCAAGGCCGGTGGTAAGGTCAACGTGGCAGCCTCCTCTC
AAGGCGGCGAAGCCGCCGCCGCCGCCCTCAAACGCGCCCTCACCTTCGCG
GGATTCCTTAAAGTCGCTGCCAACCCGGAAGACTCCTGTGTCCTTAGTGG
GGAGCGGGCGGCGTGGGAGACGGGAGCATCGGCGCCGGTTCGCCTCTCGT
TCGGCGCGTCGAAGAACGGTTCGCGGAACGGTACCAACGGGAACGGGTCA
GCGGCGGCGGCGGCGGCGGCCCCGAGCAAGACGTGGAAGCTGGCGATGGA
TGATGGAGAGGAAGGGGCTGGGGGTGAGGAGGATGACGATCTTATCGACG
AGGACGCTCTGCTGGAGAGCTCGGCCCCCGTCAAGCGGGCGAGCGAAACG
GCCGGCGACGGCTGCGCCACCAAGCGACGAGCGTGCAAAGACTGCTCCTG
CGGCCGTGCCGAGATGGAGATGAACGGGGGGGGCAGCAACAACAACGGCG
GCGCCGCGGGGCCCCTGCCGGTGGTGTCCGTCGGGGACGACGTCGACGAT
GCCCTCACTTCCGCCTGCGGCAACTGCTCCAAGGCCGGCGACGGCTGCGC
CACCAAGCGACGAGCGTGCAAAGACTGCTCCTGCGGCCGTGCCGAGATGG
AGATGAACGGGGGGGGCAGCAACAACAACGGCGGCGCCGCGGGGCCCCTG
CCGGTGGTGTCCGTCGGGGACGACGTCGACGATGCCCTCACTTCCGCCTG
CGGCAACTGCTCCAAG