mRNA_E-fasciculatus_F_contig100.19.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig100.19.1 vs. uniprot
Match: D8LFE3_ECTSI (Abortive infection protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE3_ECTSI) HSP 1 Score: 719 bits (1856), Expect = 5.370e-253 Identity = 372/392 (94.90%), Postives = 380/392 (96.94%), Query Frame = 1 Query: 1 MSLSAAAMVAWGANTLFVPNAVKPAFLPQRHGPAKFNRVPT-GELSTRPWVAIAPFGGTNTRMQGSRSVKMAAETPKGAGMLQGPNLELMRILVQGEVAVGTAAAGLAFLTKVKPFAGTVLSWAAIKAGCLGALPIFLVSVLLEKSGVNFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLIGGIPALVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDLLTFLEVHQRATAQLETTLRGDLPQKEQEKRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLLALNYSALLQPKAGKQIGGR 1173
MSLSAAA VAWGANTLFV AVKPAFLPQRHGPA FNR PT G+LS+RPWVAIAPFGG +TRM GS SVKMAAE PKG+GMLQGPNLELMRILVQGEVAVGTAAAGLAFLTKV PFAGT+ SWAA+KAGCLGALPIFLVSVLLEKSGV+FFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLIGGIPALVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYD+LTFLEVHQRATAQLETTLRGDLPQKEQEKRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLLALNYSALLQPKAGKQIGGR
Sbjct: 1 MSLSAAATVAWGANTLFVSPAVKPAFLPQRHGPATFNRPPTAGQLSSRPWVAIAPFGGASTRMHGSGSVKMAAEKPKGSGMLQGPNLELMRILVQGEVAVGTAAAGLAFLTKVNPFAGTLFSWAALKAGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLIGGIPALVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDMLTFLEVHQRATAQLETTLRGDLPQKEQEKRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLLALNYSALLQPKAGKQIGGR 392
BLAST of mRNA_E-fasciculatus_F_contig100.19.1 vs. uniprot
Match: A0A836CHD9_9STRA (CAAX protease self-immunity-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD9_9STRA) HSP 1 Score: 272 bits (696), Expect = 2.320e-80 Identity = 147/305 (48.20%), Postives = 206/305 (67.54%), Query Frame = 1 Query: 241 LQGPNLELMRILVQGEVAVGTAAAGLAFLTKVKPFAGTVLSWAAIKAGCLGALPIFLVSVLLEKSGVNFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLIGGIPALVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDLLTFLEVHQRATAQLETTLRGDLPQKE-------------QEKRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLL 1116
L G N L+R LVQGEVAV AA +A + P AG S I + A+PIF+ SV+LE+S + F++ID+DT+L+VVQ+FGAKR+ + + ++AA+AG EE+LFRG+IQ GLS IG +PAL+++S+LFGLAH+PVPGASS EA YG FG LY+ +GGNL PI++H LYDL TF+EVH RAT+++ G PQ Q+KR V V+K++ L FV + G+F LDLDKNG +D++ELQLG+RTFG+F + E+ I + ADL+++ ++FDE+++LL
Sbjct: 21 LSGVNNGLVRTLVQGEVAVLAVAAVIATFLNINPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATSRIGVAAAGVPPQPAAASQASGMAARVLQDKR-VQDVIKRYGLPAPFVKNAIGVFGMLDLDKNGTLDRRELQLGVRTFGRFTNDEQLDAIYKRADLNQDGEISFDEFLKLL 324
BLAST of mRNA_E-fasciculatus_F_contig100.19.1 vs. uniprot
Match: A0A0G4EAR4_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EAR4_VITBC) HSP 1 Score: 193 bits (490), Expect = 9.590e-51 Identity = 129/336 (38.39%), Postives = 186/336 (55.36%), Query Frame = 1 Query: 112 RVPTGELSTRPWVAIAPFGGTNTRMQGSRS-VKMAAETPKGAGMLQGPNLELMRILVQGEVAVGTAAAGLA-FLTKVKPFAGTVLSWAAIKAGCLGALPIFLVSVLLEKSGVNFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLST-LIGGIPA-LVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDLLTFLEVHQRATAQLETTLRGDLPQKEQEKRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWV 1107
RV GE S +P ++AP T +K+ TP+ PNL+L+ V GE + A G A F+ + PF G+ L A+ G L +LP+ LL+ F+KID+DTK V+ +FG + N P V+L + LA AGF EE LFRG + + L GG P+ L+ISS LFG+AHSPVPGA +F EA YG FG++Y M+ GN+ VP+IAH YD +TFL VH RAT++++ P+ R + V++ +L +F + FQ LDLD +G I ++EL+LGLR F E+ + D D + + F+E++
Sbjct: 47 RVLGGETSPQPLHSLAPKTDKPTDRDALLGDLKLLELTPRR------PNLQLVASFVIGEALLAAATFGTAYFVPFLDPFFGSHLDQEAVVQGVLWSLPLVAFGFLLDNLPWKIFKKIDRDTKFLVLALFGKEANLPTVALLAATLAGAAGFAEEALFRGTLLPLFNLPLFGGFPSGLLISSFLFGVAHSPVPGADAFLEAVYGLWFGVIYYMADGNIWVPMIAHAFYDFVTFLWVHVRATSRVKQLTESVSPEA---LREMEMQVRE-SLPAEFARFAKATFQMLDLDGSGGITKEELRLGLRVFSNRLRDEDVDNLFAAMDRDGSGQIDFNEFL 372
BLAST of mRNA_E-fasciculatus_F_contig100.19.1 vs. uniprot
Match: A0A0G4I0J1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I0J1_9ALVE) HSP 1 Score: 130 bits (326), Expect = 6.170e-29 Identity = 96/278 (34.53%), Postives = 139/278 (50.00%), Query Frame = 1 Query: 223 PKGAGMLQGPNLELMRILVQGEVAVGTAAAGLAFLTKVKPFAGTVLSWAAIKAGCLGALPIFLVSVLLEKSGV------------NFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLIGGIPALVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDLLTFLEVHQRATAQLE-TTLRGDLPQKEQEKRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTF 1017
PKG+ G NLE + E V + G + L V V S + G P LV+ L +G+ ++ R+I++DT L+ + + G V L+S LA A EE+ FRGV+ + +G +LV+SS++FG+ H+ PG S+ EA GA FG L++ SGGNLLVPI+ H +YD +TF+ H R A+LE +R + +K A K ++F +FQ LDLDKNG I +EL+ GLR F
Sbjct: 40 PKGSKGQPGKNLEGVARKNPNEYIVKSFLFGQSLLAVVGVVLAAVFSLPLQEVLAAGVEPERLVNAALVGAGMAGGFAVLNLLPLDYIREIERDTDLFCLGLMGKDTKPGRVFLYSLALALGASVSEEIFFRGVLLPLGAQYLGEGVSLVVSSLIFGVGHTNTPGGSTLLEAGLGAVFGYLFISSGGNLLVPIVCHFVYDFITFVVSHTRGKARLEGVNIREKFLSDQVQK---AKQFFKEADGEQFAAFCMQVFQLLDLDKNGFISVEELRQGLRVF 314
BLAST of mRNA_E-fasciculatus_F_contig100.19.1 vs. uniprot
Match: A0A7S1YIE3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIE3_9STRA) HSP 1 Score: 103 bits (257), Expect = 6.810e-20 Identity = 109/377 (28.91%), Postives = 170/377 (45.09%), Query Frame = 1 Query: 73 AFLPQRHGPAKFNRVPTGELSTRPWVAIAPFGGTNTRMQGSRS---VKMAAETPKGAGMLQGP-NLELMRILVQGEVAVG----TAAAGLAFLTKVKPFAGTVLSWAAIKAGCLGALPIFLVSVLLEKSGVNFFRKIDQDTKLYVVQVFGAKRNWPVVSLW-SFVLAANAGFFEEVLFRGVIQQGL---STLIGGIP-----ALVISSVLFGLAHSP----VPGASSFTEACY--------GANFGLLYMMSGGNLLVPIIAHVLYDLLTFLEVHQRATAQLETTLRGDLPQKEQEKRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLL 1116
AF P+ P+K P+ L G M SRS + MA E+ K G P N+ L+ L + +G T AGL LT+ F L+ G LG P+ L S +E S ++ T + V+++FG K P+++ + S L G EEV FRG + L ST G+ + +S+++F H+ + G +F + GA F LY+ S NL VPIIAH LYD +TF + H Q+E L + + K S++FV+ + F +D +K+GV+ +KEL++ L ++G S E+ I + ADLD++ A+ F E++ +
Sbjct: 15 AFAPKVVSPSKLTSSPSEAL------------GMTQPMSMSRSPTKLYMATESNKNEGKKGPPVNIGLIGQLAANQALIGSTIWTGGAGLQTLTQYADFGPISLA-----LGVLGLAPLLLFSRQVETSESPLAAGLNLSTNMAVLRLFGDKPQ-PILAFFVSVFLGGITGLVEEVTFRGQLLPALAQWSTTAFGVDDGTLFGVALSTLIFAALHANPSGLLKGGDAFLDNLVLLGFQIVTGAIFATLYL-STQNLAVPIIAHSLYDFVTFYKTHLDIAGQMEYASNEKLMPSTEFREEGKW---KTERSEEFVEGARETFYLMDTNKDGVLSRKELRVALFSYGINLSKMESEMIRKVADLDESGAIDFGEFLEFV 369
BLAST of mRNA_E-fasciculatus_F_contig100.19.1 vs. uniprot
Match: A0A7S0HFR6_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HFR6_9CRYP) HSP 1 Score: 96.7 bits (239), Expect = 4.330e-18 Identity = 77/277 (27.80%), Postives = 131/277 (47.29%), Query Frame = 1 Query: 391 GALPIFLVSVLLEKSGVNFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLIG--GIP----ALVISSVLFGLAHSPVPGASSFT------EACYGANFGLLYMMSGGNLLVPIIAHVLYDLLTFLEVHQRATAQLETTLRGDLPQKEQEKRNVATVVK-----KFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEW---VRLLALNYSALLQPKAGKQ 1161
G+LPI + + S F I+ T + +++FG+K+N S +L G EE+ FR + L+ G G P L+ SS++FGLAH + G+ + G FG+LY++SG NLLVP H +YD T ++ H+ +T+QL+ QE+ + A + + N+ ++ + S IF D ++G++ E++ ++ G + ++AD + ++AL DEW V LL +A + P KQ
Sbjct: 35 GSLPILYLGNKIATSDAKTFIDINFSTNILALKLFGSKKNLLYTFGVSAILGTITGLCEELSFRALGLPILARRFGEAGDPNILLGLLASSLVFGLAHWSIGGSWKDNAVVVPLQILTGFWFGILYVLSGFNLLVPAGVHAIYDAYTLIDAHRTSTSQLQYA---------QERSSSAKFLPIGQTDEGNMQERIIQNSRLIFYLADTSRDGILQLAEIRAAIQQLGYRPDDSLLVSLFKQADNNSDDALDLDEWNVFVELLRQQPAAAIMPAEKKQ 302
BLAST of mRNA_E-fasciculatus_F_contig100.19.1 vs. uniprot
Match: A0A7R9TU82_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TU82_9VIRI) HSP 1 Score: 91.7 bits (226), Expect = 4.650e-16 Identity = 79/276 (28.62%), Postives = 121/276 (43.84%), Query Frame = 1 Query: 379 AGCLGALPIFLVSVLLEKSGVNFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLI------GGIPALV----ISSVLFGLAH----SPVPGASSFT-EACYGANFGLLYMMSGGNLLVPIIAHVLYDLLTFLEVHQRATAQLETTLRGDLPQKEQE---KRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLLALNYSALLQPKA 1152
A GA+ + + LE S I ++T+++V+ +FG + V + L G EE+ FRGV+ + + G+P LV +SS FGLAH GA+ EA YG Y++SG NLL PIIAH +YD + H R ++ G +E R S V + +D D+NG +D +EL++ L FG A+A E+ ++ R L+FD + +LL L+ P+A
Sbjct: 78 AAAAGAVVLVALGRALESSSNPTLANIARETEIFVLALFGERARPLAVGAVALPLVLFTGLTEEIAFRGVMFPSVVNAVPPAAGGAGVPGLVAGALVSSFFFGLAHWGGDRTTEGAALVALEASYGLVLAATYVLSGYNLLAPIIAHAVYDWEAIVFPHLRVCDRIAYARAGAGGAYGEEGIVTREALRTAAAAGQSMADVMRVRAAYLLIDTDQNGAVDAEELRVALAAFGIKATAAESDKLARAWSTGGTGQLSFDSFYKLL-LSLGVANSPEA 352
BLAST of mRNA_E-fasciculatus_F_contig100.19.1 vs. uniprot
Match: UPI001260D703 (CPBP family intramembrane metalloprotease n=1 Tax=Tautonia marina TaxID=2653855 RepID=UPI001260D703) HSP 1 Score: 88.2 bits (217), Expect = 4.740e-16 Identity = 62/202 (30.69%), Postives = 104/202 (51.49%), Query Frame = 1 Query: 265 MRILVQGEVAVGTAAAGLAFLTKVKPFAGTVLSWAAIKAGCLGALPIFLVSVLLEKSGVNFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLIGGIPALVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDLLT---FLEVHQRAT-AQLETTLRGDLP 858
+R+ + E+ + A G+ + P+ + + + G LP+ L+ ++ ++ ++I + +++ + W + ++A AG EE LFRGV+Q+ L +G PAL I+S++FGL H+ P + GA GLL++M+G NLLVPI+AH +YDL+ FL T + ETTL DLP
Sbjct: 15 VRVAIIVELGLAVLAFGIGLPLGIDPWNALEGNISGVLIGIAATLPMILLLLICDRDAFRPMKRIRGLLEQFLLPPLRGRPWWELA-----LIAGAAGLGEETLFRGVMQEVLRDWLGFWPALAIASIVFGLLHALTP-TYAIVATLIGAYLGLLFVMTG-NLLVPIVAHGVYDLIALIYFLRTSPDDTISPSETTLMEDLP 209
BLAST of mRNA_E-fasciculatus_F_contig100.19.1 vs. uniprot
Match: A0A3E0NC54_9BACT (CPBP family intramembrane metalloprotease n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0NC54_9BACT) HSP 1 Score: 89.4 bits (220), Expect = 8.910e-16 Identity = 70/188 (37.23%), Postives = 94/188 (50.00%), Query Frame = 1 Query: 271 ILVQGEVAVGTAAAGLAFLTKVKPFAGTVLSWAAIKAGCLGALPIFLVSVLLEKSGVNFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVL-AANAGFFEEVLFRGVIQQGLSTLIGG--------IPALVISSVLFGLAHSPVPGASSFTEACY--GANFGLLYMMSGGNLLVPIIAHVLYDLLTFL 801
I V E +G GL +L V P A A+ G + +P +LL++ + F ++ Q + +VV +F S W F L AA AG EE+L RG++QQGL + G ALVI+SVLFGLAH P + AC G G LYM +G NLLVP+I H LYDL+ +
Sbjct: 83 IAVIFESLLGLVTIGLGWLVGVDPAARIHFDATALLVGAVATVPPVAALILLDRYPMGPFGRLQQFVRQHVVPIFRD------CSWWQFALIAAAAGVGEELLCRGLLQQGLEIWLTGPLGATAAMACALVIASVLFGLAHFLTP---MYAAACILIGLYLGGLYMATG-NLLVPVIVHALYDLVALI 260
BLAST of mRNA_E-fasciculatus_F_contig100.19.1 vs. uniprot
Match: L1IJ81_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IJ81_GUITC) HSP 1 Score: 87.8 bits (216), Expect = 1.090e-15 Identity = 65/197 (32.99%), Postives = 102/197 (51.78%), Query Frame = 1 Query: 202 VKMAAETPKGAGMLQGPNLELMRILVQGEVAVGTAAAGLAFLTKVKPFAGTVLSWAAIKAGCLGALPIFLVSVLLEKSGVNFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLIGGIPALVISSVLFGLAH--SPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYD 786
V++ AE K G L NL L+ L A+L + G S ++I G +LP+ +S LL+ + ++I T+ + ++F + ++ ++ + AGF EE+LFRGV+QQ L+ G IPA+ ++SV FG AH +P SF + + FG++ + S GNLLVPIIAH +YD
Sbjct: 41 VELEAEAAKPRGSLHPTNLYLLTSLFSI----------FAWLLSLDLSKGFDTSLSSIGLGFAWSLPLLAMSSLLQTLDLEPIKEIQALTEAFARKLFSGRPDYQLI-----LFCICAGFGEELLFRGVLQQKLAESAGLIPAISLTSVAFGAAHFLTPTYFLLSFIGSIF---FGVVLIQSNGNLLVPIIAHAVYD 219 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig100.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig100.19.1 >prot_E-fasciculatus_F_contig100.19.1 ID=prot_E-fasciculatus_F_contig100.19.1|Name=mRNA_E-fasciculatus_F_contig100.19.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=392bp MSLSAAAMVAWGANTLFVPNAVKPAFLPQRHGPAKFNRVPTGELSTRPWVback to top mRNA from alignment at E-fasciculatus_F_contig100:28590..37197- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig100.19.1 ID=mRNA_E-fasciculatus_F_contig100.19.1|Name=mRNA_E-fasciculatus_F_contig100.19.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8608bp|location=Sequence derived from alignment at E-fasciculatus_F_contig100:28590..37197- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig100:28590..37197- >mRNA_E-fasciculatus_F_contig100.19.1 ID=mRNA_E-fasciculatus_F_contig100.19.1|Name=mRNA_E-fasciculatus_F_contig100.19.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2352bp|location=Sequence derived from alignment at E-fasciculatus_F_contig100:28590..37197- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |