mRNA_E-fasciculatus_F_contig10.10.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10.10.1 vs. uniprot
Match: D7FJ17_ECTSI (DUF5745 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ17_ECTSI) HSP 1 Score: 964 bits (2492), Expect = 0.000e+0 Identity = 529/566 (93.46%), Postives = 535/566 (94.52%), Query Frame = 1 Query: 1 MSGASPSPPDSSLDEATEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGISEVVIKRQARPDGGPAAQEFWAGSRRRLKARQGQPQLQQQQNQAQHHGTSSHPPSMASRFSRHGQQHATRVSDAGRGDREQGLRVRPPRHGGLQESDHDGLDESLGRSELSPFPGEAEMKSSPSGEALTARDILEAQRMFEERGGGFERRQDMDVQEGPLRGEQLGMDRRVNRQEEDREMKYRRYYQRVLKDRLTALRKRELADARKQRFAHQNATHVAKVRQIKKERLEEKLRLARLSQRLHLQDEGRGRLSDLYKKILTALHRQRKEDDREDAARLKALHLAWQAQSDDLEKFFKERVELIVEHEQGSGRERAQTMALEERELSDLFRRAEMDYEARLSSQLEQQAVEAAAEERYHAEVQHAYKELLHMEDWSGASRDRFLGVRPNTAFEQRLKQASQSNSNIFFAEFLIVRVRADTARSRMKKERKHRDLNRAYGRAS 1698
MSGASPSPPDSSLDEATEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGISEVVIKRQARPDGGPAAQEFWAGSRRRLKARQGQPQLQQQ QAQHHGTSSHPP ASRFSRH +QHATRVSD GRGDRE GL VRPPRH GLQESDHDGLDESLGRSELSPF GE E+KSSPSGEALTARDILEA RMFEER G FER +D+DVQ+GPLRGEQLGMDRRVNRQEEDREMKYRRYYQRVLKDRLTALRKRELADARKQRFAHQNATHVAKVRQIKKERLEEKLRLARLSQRLHLQDEGRGRLSDLYKKILTALHRQRKEDDREDAARLKALHLAWQAQSDDLEKFFKERVELIVEHEQGSGRERAQTMALEERELSDLFRRAEMDYEARLSSQLEQQAVEAAAEERYHAEVQHAYKELLHMEDWSGASRDRFLGVRPNTAFEQRLKQ VRVRADTARSRMKKERKHR+LNRAYGR S
Sbjct: 1 MSGASPSPPDSSLDEATEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGISEVVIKRQARPDGGPAAQEFWAGSRRRLKARQGQPQLQQQXXQAQHHGTSSHPPPTASRFSRH-RQHATRVSDTGRGDREHGLGVRPPRHEGLQESDHDGLDESLGRSELSPFRGETELKSSPSGEALTARDILEAHRMFEEREGVFERPEDVDVQQGPLRGEQLGMDRRVNRQEEDREMKYRRYYQRVLKDRLTALRKRELADARKQRFAHQNATHVAKVRQIKKERLEEKLRLARLSQRLHLQDEGRGRLSDLYKKILTALHRQRKEDDREDAARLKALHLAWQAQSDDLEKFFKERVELIVEHEQGSGRERAQTMALEERELSDLFRRAEMDYEARLSSQLEQQAVEAAAEERYHAEVQHAYKELLHMEDWSGASRDRFLGVRPNTAFEQRLKQ---------------VRVRADTARSRMKKERKHRNLNRAYGRGS 550
BLAST of mRNA_E-fasciculatus_F_contig10.10.1 vs. uniprot
Match: A0A6H5KDB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB6_9PHAE) HSP 1 Score: 517 bits (1332), Expect = 1.760e-179 Identity = 289/338 (85.50%), Postives = 299/338 (88.46%), Query Frame = 1 Query: 574 HATRVSDAGRGDREQGLRVRPPRHGGLQESDHDGLDESLGRSELSPFPGEAEMKSSPSGEALTARDILEAQRMFEERGGGFERRQDMDVQEGPLRGEQLGMDRRVNRQEEDREMKYRRYYQRVLKDRLTALRKRELADARKQRFAHQNATHVAKVRQIKKERLEEKLRLARLSQRLHLQDEGRGRLSDLYKKILTALHRQRKEDDREDAARLKALHLAWQAQSDDLEKFFKERVELIVEHEQGSGRERAQTMALEERELSDLFRRAEMDYEARLSSQLEQQAVEAAAEERYHAEVQHAYKELLHMEDWSGASRDRFLGVRPNTAFEQRLKQASQSNSN 1587
HATRVSD GRGDRE G RVRPP H GLQESDHDGLDESLGRSELSPF GE E+KSSPSGEALTARDILEA RMFEE+G GFERR+D+DVQ+GPLRGEQLG+DRRV+RQEEDREMKYRRYYQRVLKDRLTALRK IKKERLEEKLRLARLSQRLHLQDEGRGRLSDLYKKILTALHRQRKEDDREDAARLKALHLAWQAQSDDLEKFFKERVELIVEHEQGSGRERAQTMA EERELSDLFRRAEMDYEARLSSQ AVEAAAEERYHAEVQHAYKELL MEDWSGASRDRFLGVRPNTAFEQRLKQAS+S++N
Sbjct: 2 HATRVSDTGRGDREHGFRVRPPAHEGLQESDHDGLDESLGRSELSPFRGETELKSSPSGEALTARDILEAHRMFEEQGEGFERREDVDVQQGPLRGEQLGLDRRVSRQEEDREMKYRRYYQRVLKDRLTALRK------------------------IKKERLEEKLRLARLSQRLHLQDEGRGRLSDLYKKILTALHRQRKEDDREDAARLKALHLAWQAQSDDLEKFFKERVELIVEHEQGSGRERAQTMASEERELSDLFRRAEMDYEARLSSQ----AVEAAAEERYHAEVQHAYKELLQMEDWSGASRDRFLGVRPNTAFEQRLKQASESSNN 311
BLAST of mRNA_E-fasciculatus_F_contig10.10.1 vs. uniprot
Match: A0A6H5KJC8_9PHAE (DUF5745 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC8_9PHAE) HSP 1 Score: 254 bits (649), Expect = 1.920e-78 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 Query: 1 MSGASPSPPDSSLDEATEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGISEVVIKRQ 399
MSGASPSPPDSSLDEATEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGISEVVIKRQ
Sbjct: 1 MSGASPSPPDSSLDEATEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGISEVVIKRQ 133
BLAST of mRNA_E-fasciculatus_F_contig10.10.1 vs. uniprot
Match: A0A835Z720_9STRA (DUF5745 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z720_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.940e-37 Identity = 74/125 (59.20%), Postives = 94/125 (75.20%), Query Frame = 1 Query: 46 ATEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGISEVVIK-RQARPDGG 417
A E+ +L INTLL RVGI AKPI SF E++KSASSMFVAIFE MF+V + G+VRKP + +YV NAQ+++DAL IL+++L H+TG A+ RGD AI NLVDIF GIS++V+K RQ GG
Sbjct: 6 AAEDEVLLRKINTLLTRVGIPAKPITSFNEVKKSASSMFVAIFEGMFKVTREGIVRKPTQLQDYVRNAQVIIDALDKEILHINLDHVTGAAVARGDAQAIHNLVDIFFGISDMVLKFRQQDSRGG 130
BLAST of mRNA_E-fasciculatus_F_contig10.10.1 vs. uniprot
Match: A0A7S4DH09_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH09_HETAK) HSP 1 Score: 142 bits (358), Expect = 1.750e-35 Identity = 70/119 (58.82%), Postives = 94/119 (78.99%), Query Frame = 1 Query: 43 EATEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGISEVVIKRQ 399
E +EE I+A+ N LL VGI AKPI+SF+EL++ ASSMFVA+FEAMF +R +G++R+P +YVHNAQMV+DAL+ IL M+L HITG+ IV GD + I+N+VDI +GISEV +KR+
Sbjct: 20 ELSEENVIVANTNELLQAVGIYAKPISSFQELQRIASSMFVAVFEAMFDIRLKGIIREPGSRSDYVHNAQMVIDALSKSILKMNLVHITGDLIVDGDPIGIKNMVDILIGISEVWLKRR 138
BLAST of mRNA_E-fasciculatus_F_contig10.10.1 vs. uniprot
Match: A0A2D4CC91_PYTIN (DUF5745 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC91_PYTIN) HSP 1 Score: 92.0 bits (227), Expect = 7.610e-18 Identity = 54/145 (37.24%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 64 ILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILN--MDLSHITGEAIVRGDTVAIRNLV-------DIFMGISEVVIKRQARPDGGPAAQEFWAGSRRRLKARQ 471
+L N LL+R+G A+ +++L S SSM VA++E +FQ R GVVR P+ V +Y HNAQ+VVDAL+G +L+ D +H++GE++ GD +I LV D+ G + + R A D P+ + SR ++ R+
Sbjct: 41 VLLQTNALLDRLGFGARSFEDYDDLVASVSSMSVALYEKLFQFRLEGVVRVPSSVTDYAHNAQLVVDALSGALLDEDFDAAHLSGESLCSGDVDSIAQLVRMLEHIHDVLYGDDDAALSRSAT-DPNPSGSRSKSLSRPSIEERE 184
BLAST of mRNA_E-fasciculatus_F_contig10.10.1 vs. uniprot
Match: A0A2R5GFQ7_9STRA (Centrosomal protein of 95 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFQ7_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.260e-16 Identity = 50/101 (49.50%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 64 ILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIF 366
I+ N L ++ I+ +PI +FEEL+KSASSMFVAIFE +F VR + V+RKP V +Y+ NA +V+ AL+ L +DLS ++GE I RGD V I +++ IF
Sbjct: 99 IVQRTNDLFVKLNITTRPIQAFEELQKSASSMFVAIFETLFNVRLKNVIRKPRVVTDYITNANLVMTALSES-LPIDLSFLSGEDIYRGDPVQIHHMLSIF 198
BLAST of mRNA_E-fasciculatus_F_contig10.10.1 vs. uniprot
Match: A0A2D4BTL5_PYTIN (DUF5745 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTL5_PYTIN) HSP 1 Score: 89.4 bits (220), Expect = 1.290e-15 Identity = 46/108 (42.59%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 64 ILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILN--MDLSHITGEAIVRGDTVAIRNLVDIFMGISE 381
+L N LL+R+G A+ +++L S SSM VA++E +FQ R GVVR P+ V +Y HNAQ+VVDAL+G +L+ D +H++GE++ GD +I LV + I +
Sbjct: 41 VLLQTNALLDRLGFGARSFEDYDDLVASVSSMSVALYEKLFQFRLEGVVRVPSSVTDYAHNAQLVVDALSGALLDEDFDAAHLSGESLCSGDVDSIAQLVRMLEHIHD 148
BLAST of mRNA_E-fasciculatus_F_contig10.10.1 vs. uniprot
Match: A0A7S2WBU4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WBU4_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.460e-15 Identity = 48/101 (47.52%), Postives = 72/101 (71.29%), Query Frame = 1 Query: 64 ILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIF 366
I+ N L ++ I+ +PI +FEEL+KSASSMFVAIFE +F VR + V+RKP V +Y+ NA++V+ AL+ L +DLS+++ EAI RG+ I +++ IF
Sbjct: 57 IVRRTNELFVKLNITTRPIQAFEELQKSASSMFVAIFETLFNVRLKNVIRKPRVVTDYITNAELVMTALSES-LPVDLSYLSSEAIYRGEPKHIHHMLSIF 156
BLAST of mRNA_E-fasciculatus_F_contig10.10.1 vs. uniprot
Match: A0A1V9YQH6_9STRA (DUF5745 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YQH6_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 8.250e-15 Identity = 46/124 (37.10%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 64 ILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGDTVAIRNLVDIFMGISEVVIKRQARPDGGPAAQEF 435
+L N LL G + + +EL S SSM VA+FE +F +R +GVVR+P +Y +NAQ+V+DALA +L DLSH+ G+ + GD +IR LV + + ++ +++R D + +F
Sbjct: 5 VLQETNALLRLTGFGDRIFRALDELVASVSSMSVALFERLFDLRLKGVVREPHSHEDYCNNAQLVIDALAEAVLTEDLSHVNGQLVCDGDLKSIRELVRVLSHVYHML--QRSRHDDASSESDF 126 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10.10.1 >prot_E-fasciculatus_F_contig10.10.1 ID=prot_E-fasciculatus_F_contig10.10.1|Name=mRNA_E-fasciculatus_F_contig10.10.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=567bp MSGASPSPPDSSLDEATEEGFILASINTLLNRVGISAKPINSFEELRKSAback to top mRNA from alignment at E-fasciculatus_F_contig10:22705..31042+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10.10.1 ID=mRNA_E-fasciculatus_F_contig10.10.1|Name=mRNA_E-fasciculatus_F_contig10.10.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8338bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10:22705..31042+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10:22705..31042+ >mRNA_E-fasciculatus_F_contig10.10.1 ID=mRNA_E-fasciculatus_F_contig10.10.1|Name=mRNA_E-fasciculatus_F_contig10.10.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3402bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10:22705..31042+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |