mRNA_D-mesarthrocarpus_Contig10331.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10331.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10331.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10331.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10331contigD-mesarthrocarpus_Contig10331:1453..4186 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size431
Hectar predicted targeting categoryother localisation
Exons4
Cds size429
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789173.5003889-CDS-D-mesarthrocarpus_Contig10331:1452..16461680789173.5003889-CDS-D-mesarthrocarpus_Contig10331:1452..1646Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10331 1453..1646 +
1680789173.511896-CDS-D-mesarthrocarpus_Contig10331:2680..27471680789173.511896-CDS-D-mesarthrocarpus_Contig10331:2680..2747Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10331 2681..2747 +
1680789173.5235572-CDS-D-mesarthrocarpus_Contig10331:3375..34601680789173.5235572-CDS-D-mesarthrocarpus_Contig10331:3375..3460Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10331 3376..3460 +
1680789173.5411444-CDS-D-mesarthrocarpus_Contig10331:4103..41861680789173.5411444-CDS-D-mesarthrocarpus_Contig10331:4103..4186Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10331 4104..4186 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10331.1.1prot_D-mesarthrocarpus_Contig10331.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10331 1453..4186 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10331.1.1

>prot_D-mesarthrocarpus_Contig10331.1.1 ID=prot_D-mesarthrocarpus_Contig10331.1.1|Name=mRNA_D-mesarthrocarpus_Contig10331.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=143bp
HGGSPAAGVGGSRRKNGNRSKNVTSLGTSALARSEDGGEDHSVSTFTPTC
FSGVHSANFSHRNTRSSLSVSFDAVARAILHAGAGKEVLVVVAKARQSAL
MREREEALRGGGGEGVQLRMNELGMLAEVYSEVPGAECRGSGT
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mRNA from alignment at D-mesarthrocarpus_Contig10331:1453..4186+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10331.1.1 ID=mRNA_D-mesarthrocarpus_Contig10331.1.1|Name=mRNA_D-mesarthrocarpus_Contig10331.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2734bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10331:1453..4186+ (Discosporangium mesarthrocarpum MT17_79)
CACGGTGGTTCGCCGGCTGCTGGCGTGGGGGGCAGTAGGAGGAAGAACGG
GAACCGGTCTAAGAACGTCACCAGCCTTGGTACGTCGGCCTTGGCGCGGT
CAGAGGACGGGGGGGAAGACCACTCCGTCTCCACTTTCACTCCCACCTGC
TTCTCAGGGGTGCACTCAGCGAATTTTTCTCATAGGAACACCAGGCGAGA
CAGCAGCAGCACAAGAGAGTAGGGAACACCGGCAACCCTCTGACCCTGAC
CCTGACCCTGACCCTAATGCTAGCCCCCAGTGTGAGGTGGTGTGTTCTGC
TACTACACTTGGTTTGTCTGGGTTTGATACTGGATAGTTGGAACAAGTCT
AACGCTAGCCTAACCCTAGCCTATTATTAGCCTAACGAGGCTTTCCTGCC
CTCTGGGACAGGCTGGGGGTTCAGGGAGAGTCTTCCCCCATCTTTATTTC
TACGATTGTCCCATGCAAGGGTTAGGGTTAACAAACCCTGTGAAACTCGA
ACGGGATTTTCTGTCTTTTCTTTTGTTCTTTCTTTTTGAGGGCAGTGGGT
AGAAGTATTAATGGTAGTACAGTGGTAGCAGGTTGTTGGGTTAGGGTTAG
GGTTAGGGTTAGGGTTAGATTCAGGGCAATCCACTTTGAAGGGGCTGCAT
GCACGGGGGATGGGCACGAGGGTGGAGACATGGGACATGAGGTATGATGC
CCAAGGCATGGGGCACGGGACATGGGTTATGAGCTGGTGTGCAAGGAGCA
CCCTGATTTTTTGATGAAAAAAGAGGTAGGTTGACTTGTGCAGGTGTCCA
CTCCTTTTTTCCCAAGGGGGGGGGTCACAAATTATCACTGAATAGTACCT
TCATCCCTTTGCCATCTTCTGTTTACCCGGTTACCTATGCAATGGTAACA
GTTACATTAGCTCTCTTGTAACTGTCGTTTTCATTTCCTCGAAGCTAGTG
ACGGTGAAATGCCGAGACCTGGTTAAATGCTCACCCTCTACACTGAAACA
CCCTATGCCTCTCCCGCCCTGACCCTAACCGTGACCTTACCCCCCTCCCC
CCTTTATGCCTGTTCGTGGCCTGTGATCGCCGATGGCACCTCTGGATCAG
GCGATGGATGACTCTTGACTTGCGTCTCTTGATGATTAACGGCTCTTGAT
TCATGCCTCTCGGTTAATGAGGAGTATTGATGTTGATGAATTTTGACTGA
CATCGGCTCTTGATTTTGAAATGACCAGGTCCAGCCTATCGGTTTCATTT
GACGCGGTGGCTAGAGCCATCCTCCACGCTGGTGCCGGAAAGGAGGTGGG
TTAAGGGCTGGAGAAAATTCAGTGTTGTTAACTGTAATGTGTCTAGGAGT
AGTGGGGTTAGGGTTAGGGTTGGGGTTCAAGCACAGGCAAAGAGTTGTGG
TAGGGTTAGGGAATATGTGGTAGGGTTAGGGATTCCTTCGCCGCCTTTCT
GGATAAGTCACTGGCACCAGGATTCTCAGTTTCATTTCATTCTCCCGGAA
CACCCCTCACCCTATACCCCTGTCCCAACTCAACCCTTGGTTTATTTTTT
CTGCCCTAACCCCAGCCCTAACCCCAACCCTGACACCAGACCATTAATTT
TACCCCTCACGCGCAGAGTCTGTCGACTGCAGTAGTGGACAGAGTTATCG
TGGGTTGAGATAACAACCCTAACCCTAAATCTAGAGCTAGTTGTCTGACG
TGTACTTATTCAGCATAAGCCAGACCCTAACCTTACCCTAACCCTATCCT
AACTGTGAAGCTGACCCTGAGCCTGACCTTATCCCTACAACCCTATTTCT
AGACCCTGATTGCTGCAGTACTTCAGATGTTTTGTTGCAGGTGTCGGTGG
AGGTGGCAACCATACCCCTCACCCTAACCCTAATCCTAACCCTATTTGGT
TGCCATTGGTTACAATGCTGCAGGTGTTGGTGGTGGTGGCCAAGGCGAGG
CAGAGTGCGCTGATGAGAGAGAGGGAGGAGGCTCTAAGGGGAGGGGGGGG
TGAGGGTGGTAAGATGCTTGACTCTCGTTTATCTGAGTGGAGCCACGACC
CCTTCCTTTTGTCCTGTTATCCTTTTACTCTCTTTGTCTCTGCTTGTTAG
TATGATTTTTTTTGTTAGTCCTGGTTGTTTCTTGACTCGATGCTGCAATC
AGTGGACTTTAGTCTTACCTAGTCTTGTTCTTGGTCTTTGCTTTTCTTAT
TCTCAGTCTTTCTGTTTTGAGTTTTCGTATGTGCCCTGGAGCCATGATCT
TTTGCCGCGCTAGCCCTGGAGTGGCAGTGCTACTGAGCTGTACTGCTAAG
GAGCCACAGTACCTTTTGTTTTGGCTACGGTCTTCTACTTGGAACGCAGT
CCTGTAGTGCTCTAGAGCACTAGAGCTTTCATGTACTTCGAAAATGTCCA
ACGCTACTATGTTGCTTTGCCTCACATTATACAGTATGCTGCCGTGGCAT
AATGTTGGAAAGTTAGTGCATTACACTGATGCTATACTGATGGTAGGATG
TTGTACTTTGGGTGCACAAAATTACCCTACAGTAGCTCATGAAACCCTCT
TCCATCTTTTATACCCCCACAGTTTGACACCTATAACTCTAACCCCTAGT
CTGGCCCCAGCCCTGACCCTGGCCCCAACCCCAAACCCTAAACCCTTGCA
GTCCAGCTCCGGATGAACGAGCTCGGTATGCTCGCTGAGGTCTACTCGGA
GGTCCCCGGGGCGGAGTGCAGGGGCAGTGGGACT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10331:1453..4186+

>mRNA_D-mesarthrocarpus_Contig10331.1.1 ID=mRNA_D-mesarthrocarpus_Contig10331.1.1|Name=mRNA_D-mesarthrocarpus_Contig10331.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=429bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10331:1453..4186+ (Discosporangium mesarthrocarpum MT17_79)
CACGGTGGTTCGCCGGCTGCTGGCGTGGGGGGCAGTAGGAGGAAGAACGG
GAACCGGTCTAAGAACGTCACCAGCCTTGGTACGTCGGCCTTGGCGCGGT
CAGAGGACGGGGGGGAAGACCACTCCGTCTCCACTTTCACTCCCACCTGC
TTCTCAGGGGTGCACTCAGCGAATTTTTCTCATAGGAACACCAGGTCCAG
CCTATCGGTTTCATTTGACGCGGTGGCTAGAGCCATCCTCCACGCTGGTG
CCGGAAAGGAGGTGTTGGTGGTGGTGGCCAAGGCGAGGCAGAGTGCGCTG
ATGAGAGAGAGGGAGGAGGCTCTAAGGGGAGGGGGGGGTGAGGGTGTCCA
GCTCCGGATGAACGAGCTCGGTATGCTCGCTGAGGTCTACTCGGAGGTCC
CCGGGGCGGAGTGCAGGGGCAGTGGGACT
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