prot_D-mesarthrocarpus_Contig10006.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10006.1.1
Unique Nameprot_D-mesarthrocarpus_Contig10006.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length234
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10006.1.1 vs. uniprot
Match: D7G5K5_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K5_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 4.340e-5
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:  135 TKDLALEALAEYLLDHPHHALGMELGVDDGPLLPGTFTPM 174
            TKD+ALEAL ++L+D+P   +G+ELG  D PLLPGT  PM
Sbjct:  702 TKDIALEALVDHLIDNPSDVVGLELGPGDEPLLPGTLLPM 741
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10006.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5K5_ECTSI4.340e-560.00Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10006contigD-mesarthrocarpus_Contig10006:836..3582 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10006.1.1mRNA_D-mesarthrocarpus_Contig10006.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10006 836..3582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10006.1.1 ID=prot_D-mesarthrocarpus_Contig10006.1.1|Name=mRNA_D-mesarthrocarpus_Contig10006.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=234bp
CGAGGGPSSNFSPRFGSRCGKKELIRFLSYLQVSPASPPWVESLLSLLKV
SNKNTLQIKAVVKDALNSAATAKEEDDAPPGPTLTPLRRLIVELRQALQA
GKNYARGGGTIPVASANAMPGIADRQGGAGGGGITKDLALEALAEYLLDH
PHHALGMELGVDDGPLLPGTFTPMRTLFSQVGHNRPSGHGSAGHCWYASG
SPGAGAGSGTLGGPRALPVLAGGCARSGGEEFRE
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