mRNA_D-mesarthrocarpus_Contig1030.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1030.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig1030.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1030.3.1 vs. uniprot
Match: A0A662YJ67_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJ67_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.360e-30
Identity = 96/279 (34.41%), Postives = 139/279 (49.82%), Query Frame = 1
Query:  307 IDNSLCEASGMMMKRRIPWMCCLGFGEVPAPYFTRNKYEY------SVIQAPPGDPRDLSRMGNPTWKGVEALELTLIGQEE------ITLASLCCHNLRPMSIHFQTPSSGVDSFFTVRHSTCGDGLCYPLQ-PLELFSNDKINDAPRLVGRIRDDHCDHIWE--RLNC--MYITDIETRSSHKKFKRAYSIRVNKGCSGGTVQNFCAPSCFRGDAVYDILNARGKVVAHLQERFNP-ECISV-----SPFSTYLLAFPDGSGVDERALLVAALLSIE 1074
            I N+L E  G+++ R+      +    V  PY  +NKY          ++  P DP   S    PT   ++ALE  +   EE        +  L C +LRP+ +HF   S G D +   R   CG  LC PL+ PL+   +   N  P  +GR+R+D   ++     L C  M  TDIE       +++ YS+R+N  C G  V N CAPSC R DAVYD+L+ +G+VVA+LQ  F   EC+         F+ ++L FP  S   +RALL+AAL  ++
Sbjct:   27 IQNTLGEMEGVVL-RQSTQKAEVAAEAVGLPYEAKNKYTIHQLPTSKKVKTHPNDPDGWS----PTGPELKALESFMYANEESGCFARTVMKCLGCGSLRPLKMHFTVGSDGGDVYLIDRPFKCGGVLCCPLEMPLDAMGSG--NTEPTRIGRVREDFSPYLGRCCSLCCLGMTYTDIERALPDGSYEKRYSLRLNLCCCG-RVNNCCAPSCCRNDAVYDVLDPKGEVVANLQVSFGSGECLKALCRLGGGFTNFVLEFPRDSTPQDRALLLAALFQLD 297          
BLAST of mRNA_D-mesarthrocarpus_Contig1030.3.1 vs. uniprot
Match: A0A662XQK5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQK5_9STRA)

HSP 1 Score: 122 bits (306), Expect = 8.690e-28
Identity = 88/252 (34.92%), Postives = 126/252 (50.00%), Query Frame = 1
Query:  388 VPAPYFTRNKYEY------SVIQAPPGDPRDLSRMGNPTWKGVEALELTLIGQEE------ITLASLCCHNLRPMSIHFQTPSSGVDSFFTVRHSTCGDGLCYPLQP-LELFSNDKINDAPRLVGRIRDDHCDHIWERLNCMYI----TDIETRSSHKKFKRAYSIRVNKGCSGGTVQNFCAPSCFRGDAVYDILNARGKVVAHLQERFNP-ECISV-----SPFSTYLLAFPDGSGVDERALLVAALLSIE 1074
            V  PY   NKY          ++  P DP   S    PT   ++ALE  +  +EE        +  L C +LRP+ +HF   S   D +   R   CG  LC PL+  L+  S+DK    P  +GR+R+D   ++    +   +    TDIE       +++ YS+RVN  C G  V N CAPSC R DAVYD+L+ +G+VVA+LQ  F   EC+         F+ ++L FP  S   +RALL+AAL  ++
Sbjct:   40 VGLPYEAGNKYTIHQLPTNKKVKTHPKDPDGWS----PTGPELKALEPFMRAKEESGCFTRTMMKWLGCGSLRPLKMHFTVGSDDGDVYLIDRPFKCGGALCCPLEMRLDAKSSDKTE--PTRIGRVREDFSPYLGRCCSACCLATTYTDIERALPDGSYEKRYSLRVNLSCCG-RVNNCCAPSCCRNDAVYDVLDPKGEVVANLQVSFGSGECLKACCRAGGGFTNFVLQFPRDSTPQDRALLLAALFQLD 284          
BLAST of mRNA_D-mesarthrocarpus_Contig1030.3.1 vs. uniprot
Match: A0A6A4DY72_9STRA (Phospholipid scramblase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DY72_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.940e-27
Identity = 92/255 (36.08%), Postives = 130/255 (50.98%), Query Frame = 1
Query:  382 GEVPA-----PYFTRNKYEYSVIQAPP---GDPRDLSRMGNPTWKGVEALELTLIGQEE------ITLASLCCHNLRPMSIHFQTPSSGVDSFFTVRHSTCGDGLCYPLQPLELFSNDKINDAPRLVGRIRDDHCDHIWERLN-CMYIT---DIETRSSHKKFKRAYSIRVNKGCSGGTVQNFCAPSCFRGDAVYDILNARGKVVAHLQERFNP-ECISV-----SPFSTYLLAFPDGSGVDERALLVAALLSIE 1074
            GEV A     P+  +NKY    + A      DP D +   +PT   ++ALE  +  QEE      I L  L C  LRP+ +HF       D++   R   CG GLC PL+ + L    +  +A R +G IR+D   ++    + C + T   DIE       +++ Y++R+N  C G  V N CAPSC R DAVYDIL+  G VVA+LQ  F   EC+         F+ Y+L FP  S  ++RALL+AAL  ++
Sbjct:   30 GEVVAQAVGLPWEAQNKYAIHRLPADKKVKNDPDDAAGW-SPTGAELKALEPFMRAQEESGVFTRIILQYLGCGYLRPLKMHFTVAGDTGDAYVIERPYKCGGGLCCPLE-MRLDGLSENGEAKR-IGCIREDFSPYMSRCCSACCFATSYTDIERALPDGTYEKRYALRLNLACCG-RVNNCCAPSCCRNDAVYDILDTEGAVVANLQVSFGTGECLKAFCRASGEFTNYVLQFPRDSTPEDRALLLAALFQLD 280          
BLAST of mRNA_D-mesarthrocarpus_Contig1030.3.1 vs. uniprot
Match: A0A2D4C590_PYTIN (Phospholipid scramblase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C590_PYTIN)

HSP 1 Score: 119 bits (297), Expect = 1.470e-26
Identity = 86/272 (31.62%), Postives = 141/272 (51.84%), Query Frame = 1
Query:  307 IDNSLCEASGMMMKRRIPWMCCLGFGEV-PAPYFTRNKYEYSVI---QAPPGDPRDLSRMGNPTWKGVEALELTLIGQEEITL-ASLCCHNLRPMSIHFQTPSSGVDSFFTVRHSTCGDGLCYPLQPLELFSNDKINDAPRLVGRIRDDHCDHI---WERLNCMYI--TDIETRSSHKKFKRAYSIRVNKGCSGGTVQNFCAPSCFRGDAVYDILNARGKVVAHLQERF-NPECISV-----SPFSTYLLAFPDGSGVDERALLVAALLSIE 1074
            + ++L  ASG++++++   +    F +V    Y  +NKY   ++   +    DP D SR   PT   +++L   L  QEE +L   + C NLRP+ +H    +S  D F   R   CG   C PL   E+  +       R +GR+R++   ++   W  + C+    TD+E       +++AY++R N  C G  V N CAPS  + DAVYDIL+ +G++VAHLQ  +   +C+       + ++ Y+L FP  + V++R LL+ AL  IE
Sbjct:   15 VASTLASASGVVIRQKTQSIEV--FAQVMDINYEAQNKYRVHLLPXDKRVKSDPXD-SRGWEPTRDELKSLPPFLFVQEESSLFMRMMCANLRPLRLHISVENSTGDVFLVXRPFQCGGACCCPL---EMHVDAVAGGNLRRIGRVRENFSPYLXKCWS-IGCLATGYTDMERALPGGXYEKAYTLRANLACCG-RVDNCCAPSXCKNDAVYDILDPKGEIVAHLQVTYAGGDCLEAXYRADNHYNNYILEFPPHASVEDRMLLLTALFQIE 278          
BLAST of mRNA_D-mesarthrocarpus_Contig1030.3.1 vs. uniprot
Match: A0A067C9S1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C9S1_SAPPC)

HSP 1 Score: 117 bits (294), Expect = 3.440e-26
Identity = 89/276 (32.25%), Postives = 129/276 (46.74%), Query Frame = 1
Query:  304 AIDNSLCEASGMMMKRRIPWMCCLGFGEVPAPYFTRNKYEYSVIQAPP-----GDPRDLSRMGNPTWKGVEALELTLIGQEE------ITLASLCCHNLRPMSIHFQTPSSGVDSFFTVRHSTCGDGLCYPLQPLELFSNDKINDAPRL-VGRIRDDHCDHIWERLN----CMYITDIETRSSHKKFKRAYSIRVNKGCSGGTVQNFCAPSCFRGDAVYDILNARGKVVAHLQERFNPE---CISVSPFSTYLLAFPDGSGVDERALLVAALLSIE 1074
            A+D SL    G+++ ++      +    +  PY T+NKY   +   PP       P D      PT   VEAL+  L   EE      + L  L C +LRPM +H        D++   R    G   C+PL      +   ++ +  + +GR R++   ++ +       C   TDIE       F + YSIRVN  C G T  N C  +CF+ +AVYDIL+ +  VVAHLQ         C ++  F+TY+L FP  S  ++RALLV AL  IE
Sbjct:    9 AVDTSLANTRGLLIHQKFQAADVVA-DVLGLPYETKNKYR--IHHMPPEKRARSHPHDAEGW-QPTTVEVEALDKFLFAHEESGLLTRMCLKYLGCSSLRPMKMHIMVEGGTGDAYVIDRPFRLGGAYCHPLT----MNLSAVHGSELVRIGRARENFSSYVGKCFQACCLCTTYTDIERLLPDNTFSKRYSIRVNIACCGRT-NNCCGGTCFKRNAVYDILDVQDNVVAHLQLTAGDTRSWCRALGSFNTYILEFPPDSTPEDRALLVTALFQIE 275          
BLAST of mRNA_D-mesarthrocarpus_Contig1030.3.1 vs. uniprot
Match: G5A451_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A451_PHYSP)

HSP 1 Score: 114 bits (285), Expect = 9.910e-26
Identity = 72/190 (37.89%), Postives = 99/190 (52.11%), Query Frame = 1
Query:  535 ITLASLCCHNLRPMSIHFQTPSSGVDSFFTVRHSTCGDGLCYPLQPLELFSNDKINDAPRLVGRIRDDHCDHIWERLNCMYI----TDIETRSSHKKFKRAYSIRVNKGCSGGTVQNFCAPSCFRGDAVYDILNARGKVVAHLQERFNP-ECISV-----SPFSTYLLAFPDGSGVDERALLVAALLSIE 1074
            I L  L C  LRP+ +HF       D++   R   CG G+C PL+ + L      N   + +GRIR+D   ++    +   +    TDIE       +++ YS+RVN  C G  V N CAPSC R DAVYDIL+  G VVA+LQ  F   EC+         F+ Y+L FP  S   +RALL+AAL  ++
Sbjct:   13 IVLQYLGCAYLRPLKMHFTVEGETGDAYVIERPFKCGGGMCCPLE-MRLDGLSGENGEVKRIGRIREDFSPYMNRCCSACCLATAYTDIERALPDGSYEKRYSMRVNVACCG-RVNNCCAPSCCRNDAVYDILDPEGAVVANLQVSFGSGECLKAICRAGGGFTNYVLQFPRDSTPQDRALLLAALFQLD 200          
BLAST of mRNA_D-mesarthrocarpus_Contig1030.3.1 vs. uniprot
Match: A0A1V9YVL7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVL7_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.460e-25
Identity = 87/273 (31.87%), Postives = 126/273 (46.15%), Query Frame = 1
Query:  307 IDNSLCEASGMMMKRRIPWMCCLGFGEVPAPYFTRNKYEYSVIQAPP---GDPRDLSRMGNPTWKGVEALELTLIGQEE------ITLASLCCHNLRPMSIHFQTPSSGVDSFFTVRHSTCGDGLCYPLQPLELFSNDKINDAPRL-VGRIRDDHCDHIWERLN----CMYITDIETRSSHKKFKRAYSIRVNKGCSGGTVQNFCAPSCFRGDAVYDILNARGKVVAHLQERFNPE---CISVSPFSTYLLAFPDGSGVDERALLVAALLSIE 1074
            ID S     G+++ ++      L    +  PY T+ KY    + A       P D     +P+   ++ L+  L   EE      I L  L C NLRPM +H     S  DS+   R    G   C PL      +   +N    + +GR R+D   ++ + ++    C   TDIE       F + Y+IR+N  C G T  N C  SCF+ +AVYDIL+  G VVAHLQ   +     C +   FST++L FP  +  ++RALL+ AL  IE
Sbjct:   12 IDTSFANTRGLVIHQQFQ-AAELAAEVLGLPYQTQTKYRIHQLPAEKRVRSHPHDAEGW-SPSTTEIKNLDKFLFAHEESSLLKRICLTWLGCRNLRPMKLHIAVDGSSGDSYIAHRPFLLGGACCCPLT----MNLSAVNGGELVRIGRAREDFSGYVSKCISACCLCTSYTDIERLLPDNSFAKRYTIRMNLACCGRT-NNCCGGSCFKHNAVYDILDVDGNVVAHLQLTASDARAWCRAAGNFSTFILEFPIDATPEDRALLLTALFQIE 277          
BLAST of mRNA_D-mesarthrocarpus_Contig1030.3.1 vs. uniprot
Match: K3WVW8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVW8_GLOUD)

HSP 1 Score: 113 bits (282), Expect = 2.100e-24
Identity = 85/285 (29.82%), Postives = 141/285 (49.47%), Query Frame = 1
Query:  307 IDNSLCEASGMMMKRRIPWMCCLGFGEVPA-----PYFTRNKYEYS------VIQAPPGDPRDLSRMGNPTWKGVEALELTLIGQEEIT-LASLC-----CHNLRPMSIHFQTPSSGVDSFFTVRHSTCGDGLCYPLQPLELFSNDKINDAP-RLVGRIRDDHCDHIWERLN--CMYIT--DIETRSSHKKFKRAYSIRVNKGCSGGTVQNFCAPSCFRGDAVYDILNARGKVVAHLQERF--NPECISVS-----PFSTYLLAFPDGSGVDERALLVAALLSIE 1074
            +  +L E +G++++++         GEV A     P+  +NKY+        V+++ P DP        PT + +E L+  L  +E+ + +A +C     C NLRP+++HF    S  D +   R    G   C PL+     + D + +   + +GR+R+D   +  + L   C+  T  DIE       +++ YS+R N  C G  V N C  +CF+ DAVYDIL+ +G++VAHLQ  +     C+         FS Y+L FP  S  ++R LL+ A+  +E
Sbjct:   20 VPQTLSEVNGLVIRQKTQK------GEVVAQMLGIPFEAKNKYKVGLLPTNKVVKSAPNDPDGWE----PTAEELEQLDTFLFAREQSSCMARVCTMFLGCGNLRPLTMHFSVAGSTGDVYVIQRPFLLGGCCCCPLE----MNLDMVAEGQAQRMGRVREDFSPYFSKCLAGCCLATTYTDIERAMPDGTYEKKYSLRSNLSCCG-RVNNCCGATCFKNDAVYDILDTKGEIVAHLQRTYAKGSSCMGACCRMGFDFSNYILEFPRDSTPEDRMLLLTAVFQVE 289          
BLAST of mRNA_D-mesarthrocarpus_Contig1030.3.1 vs. uniprot
Match: A0A2D4BX55_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX55_PYTIN)

HSP 1 Score: 112 bits (281), Expect = 2.500e-24
Identity = 85/281 (30.25%), Postives = 130/281 (46.26%), Query Frame = 1
Query:  304 AIDNSLCEASGMMMKRRIPWMCCLGFGEVPAPYFTRNKYEYS------VIQAPPGDPRDLSRMGNPTWKGVEALELTLIGQEEI-----TLASLC-CHNLRPMSIHFQTPSSGVDSFFTVRHSTCGDGLCYPLQPLELFSNDKINDAP-RLVGRIRDDHCDHIWERLNCMYI----TDIETRSSHKKFKRAYSIRVNKGCSGGTVQNFCAPSCFRGDAVYDILNARGKVVAHLQERFN--PECISVS-----PFSTYLLAFPDGSGVDERALLVAALLSIE 1074
            A+   L E +G++++++      L    V  P+   NKY  S      V++  P DP        PT + +E LE  L   EE      T  + C C  LRP+ +HF       D +   R    G   C P +     S D + D   R +GR+R+D   ++ + L+   +    TDIE       +++ Y++R N  C G  V N C  +C + DAVYDIL+ +G VVAHLQ  +    +C+         F+ Y+L FP  S  ++R LL+ AL  +E
Sbjct:   13 AVPQRLSELNGVVIRQKTQKTEALAQA-VGLPFEAANKYRISALPTNKVVKNHPHDPDGWE----PTAEELEQLEAFLFAHEESDCLTRTFFTCCGCKGLRPLRMHFSVNGGTGDVYIIDRDFKLGGSCCCPFE----MSLDAVGDGQSRRIGRVREDFSPYLNKCLSACCLATTYTDIERAMPDGTYEKKYTLRTNLSCXG-RVNNCCGATCLKNDAVYDILDTKGNVVAHLQRTYGRGTDCMGALCRMSFGFNNYVLEFPRDSTPEDRMLLITALFQVE 283          
BLAST of mRNA_D-mesarthrocarpus_Contig1030.3.1 vs. uniprot
Match: A0A662WUS7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUS7_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.910e-24
Identity = 81/236 (34.32%), Postives = 116/236 (49.15%), Query Frame = 1
Query:  388 VPAPYFTRNKYEYSVIQAP------PGDPRDLSRMGNPTWKGVEALELTLIGQEE------ITLASLCCHNLRPMSIHFQTPSSGVDSFFTVRHSTCGDGLCYPLQP-LELFSNDKINDAPRLVGRIRDDHCDHIWERLNCMYI----TDIETRSSHKKFKRAYSIRVNKGCSGGTVQNFCAPSCFRGDAVYDILNARGKVVAHLQERFNP-ECISV-----SPFSTYLLAFPDGS 1026
            V  PY   N+Y    + A       P DP   S    PT   ++ALE  +  +EE        +  L C +LRP+ +HF   S G D +   R   CG  LC PL+  L+  S+D   +AP  +GR+R+D   ++    +   +    TDIE       +++ YS+R+N  C G  V N CAPSC R DAVYD+L+  G+VVA+LQ  F   EC+         F+ ++L FP  S
Sbjct:   53 VGLPYEASNQYTIHQLPASKKVKTHPNDPDGWS----PTGPELKALESFMNAKEESGCFARTIMTCLGCGSLRPLKMHFTVGSDGGDVYLIDRPFKCGGALCCPLEMHLDAMSSD---NAPTRIGRVREDFSPYLGRCCSACCLGTTYTDIERALPDGSYEKRYSLRLNLCCCG-RVNNCCAPSCCRNDAVYDVLDPNGEVVANLQVSFGSGECLKALCRLGGGFTNFVLQFPHDS 280          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1030.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A662YJ67_9STRA1.360e-3034.41Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A662XQK5_9STRA8.690e-2834.92Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A6A4DY72_9STRA3.940e-2736.08Phospholipid scramblase n=5 Tax=Phytophthora TaxID... [more]
A0A2D4C590_PYTIN1.470e-2631.62Phospholipid scramblase n=1 Tax=Pythium insidiosum... [more]
A0A067C9S1_SAPPC3.440e-2632.25Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
G5A451_PHYSP9.910e-2637.89Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A1V9YVL7_9STRA3.460e-2531.87Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
K3WVW8_GLOUD2.100e-2429.82Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4BX55_PYTIN2.500e-2430.25Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A662WUS7_9STRA2.910e-2434.32Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1030contigD-mesarthrocarpus_Contig1030:6616..8517 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog67593.Physo136044
Model size1486
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.53e-29
EggNOG OGs2CVF4@1|root,2RRWU@2759|Eukaryota,3Q7GX@4776|Peronosporales
Cds size834
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789170.6843798-UTR-D-mesarthrocarpus_Contig1030:6615..69941680789170.6843798-UTR-D-mesarthrocarpus_Contig1030:6615..6994Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1030 6616..6994 -
1680789170.7239158-UTR-D-mesarthrocarpus_Contig1030:8244..85171680789170.7239158-UTR-D-mesarthrocarpus_Contig1030:8244..8517Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1030 8245..8517 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789170.6967707-CDS-D-mesarthrocarpus_Contig1030:6994..77141680789170.6967707-CDS-D-mesarthrocarpus_Contig1030:6994..7714Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1030 6995..7714 -
1680789170.712004-CDS-D-mesarthrocarpus_Contig1030:8130..82441680789170.712004-CDS-D-mesarthrocarpus_Contig1030:8130..8244Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1030 8131..8244 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1030.3.1prot_D-mesarthrocarpus_Contig1030.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1030 6995..8244 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1030.3.1

>prot_D-mesarthrocarpus_Contig1030.3.1 ID=prot_D-mesarthrocarpus_Contig1030.3.1|Name=mRNA_D-mesarthrocarpus_Contig1030.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=278bp
MYVLPEKIDRAIDNSLCEASGMMMKRRIPWMCCLGFGEVPAPYFTRNKYE
YSVIQAPPGDPRDLSRMGNPTWKGVEALELTLIGQEEITLASLCCHNLRP
MSIHFQTPSSGVDSFFTVRHSTCGDGLCYPLQPLELFSNDKINDAPRLVG
RIRDDHCDHIWERLNCMYITDIETRSSHKKFKRAYSIRVNKGCSGGTVQN
FCAPSCFRGDAVYDILNARGKVVAHLQERFNPECISVSPFSTYLLAFPDG
SGVDERALLVAALLSIEMRTPSGRTVC*
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mRNA from alignment at D-mesarthrocarpus_Contig1030:6616..8517-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1030.3.1 ID=mRNA_D-mesarthrocarpus_Contig1030.3.1|Name=mRNA_D-mesarthrocarpus_Contig1030.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1902bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1030:6616..8517- (Discosporangium mesarthrocarpum MT17_79)
AGAACCCTTACATCTCCTTTCTAGGATTTACACAAGCAGGACCAAGACTC TCGCTCCCTCTGACATACACCAACAGTGGGGAACACAGGTTAGTTCACGA CTACATATGAAGCAGAGTTACCAAAATTGAGTAGGAAGTGAGCCTAGCTT ATTTTCTGAGTGACCCAGTCCAGTCCGTTGCTCCAAGAGCAGGTGAACAG CCAGTGTCCAACAGTTGCCACAGTTGCCGTTCGGAGCTGGTGTTGCACAA CGCCCCTCTGCCGACCTGGAAGAATGTATGTGCTTCCAGAGAAAATTGAT CGGGCGATAGATAATAGCCTGTGCGAGGCCTCTGGCATGATGATGAAACG ACGAATTCCCTGGATGTGCTGTCTCGGATTCGGGGAGGTGAGGCAATGGA TTTATGAGAGTGAGGCAGAAATGAGTAGTTTGTACGTGCCTAGATCACTT CACATCGTGCCGGTATGTTTTGTTCTATGTGAGACCAATAACTTAGGTTC CCTCAAGCAAATGCGTCCGTGCAATAGAAATCAAGCAGTTTTGGAATCGC TCCGTAACAAGTCTCTTGCCTAGAGGCACGGGCCCCTGAAGTCCACGGGG CCGCTTTCCTGCCGAGTTTTCCCCGCATTCAAATAGGAGGGCAATTGGAG TTTAGTCGCCCTTTCCTTTGGTTATCGATGCTGCAATCTTGCGTTTACAG GTTGCACGGGTAACCTCTGTTCTAGACAAAAAGACGGTGGCAACTGTTGC AGATTTGACATTGCTAATACTTCGCATCTTGTGTCACCTATACATCCGTG CAGGTACCTGCCCCCTACTTCACCCGGAACAAGTACGAGTATTCCGTAAT CCAGGCGCCTCCCGGTGATCCCAGAGACCTCTCCAGGATGGGGAACCCCA CTTGGAAGGGAGTCGAAGCCCTAGAACTTACCCTCATTGGACAAGAAGAG ATCACTCTTGCCAGCTTGTGCTGCCACAATCTTCGCCCTATGAGCATCCA TTTTCAGACCCCATCCAGTGGCGTGGACTCCTTTTTTACCGTCAGGCACT CAACATGCGGGGATGGTTTGTGCTACCCTCTGCAACCTTTGGAACTCTTC TCCAATGACAAAATTAATGACGCGCCTAGGCTTGTTGGCCGAATCCGCGA TGACCATTGCGACCACATCTGGGAACGCTTAAACTGCATGTACATCACTG ACATTGAGACCAGGTCTTCCCACAAAAAATTCAAGAGGGCCTACTCGATC CGTGTGAACAAGGGATGCTCTGGGGGAACCGTACAAAACTTCTGCGCCCC CTCATGTTTCAGAGGGGATGCTGTGTACGACATTCTTAACGCCCGCGGAA AAGTCGTGGCCCATCTCCAGGAGAGGTTTAACCCTGAGTGCATCTCAGTT TCGCCTTTCAGTACCTACCTATTGGCGTTCCCGGATGGCTCTGGGGTTGA TGAGAGAGCACTTCTGGTGGCTGCCCTACTGAGTATAGAAATGCGGACAC CGTCAGGTAGGACGGTCTGCTAACCTACGTATTTCTTCTTCATCAGGTCC TCCCAGGTATGTTGGTTATTTAGGAAGCTTAAATTGGCCTCCGCCTATTA GCAGTTGACCTGAGGAGAGGATCAGCATAGATTTAGCCTAAGCACCATCA CCTTAGACCCATTCATGCAAGCCATACTCAGATACTGTATCAGTCCCTTG GGTGGTAGTCCTTTGCTTTGCTTGGACTTTGTTCATGTGATCAATCTTGC GCACTAAATACTCTTTTGGCAGATAAATCACTCCCAGTTTTCTTTCATGT TTATATATACTTCGTAAATGTGTTGTATCCAACAAGAGACAGGAGAGATA GTAGGCCTACACGTTTACTTCGCATAGTATTCAATTTATGGATTAGTTGA AC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1030:6616..8517-

>mRNA_D-mesarthrocarpus_Contig1030.3.1 ID=mRNA_D-mesarthrocarpus_Contig1030.3.1|Name=mRNA_D-mesarthrocarpus_Contig1030.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=834bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1030:6616..8517- (Discosporangium mesarthrocarpum MT17_79)
ATGTATGTGCTTCCAGAGAAAATTGATCGGGCGATAGATAATAGCCTGTG
CGAGGCCTCTGGCATGATGATGAAACGACGAATTCCCTGGATGTGCTGTC
TCGGATTCGGGGAGGTACCTGCCCCCTACTTCACCCGGAACAAGTACGAG
TATTCCGTAATCCAGGCGCCTCCCGGTGATCCCAGAGACCTCTCCAGGAT
GGGGAACCCCACTTGGAAGGGAGTCGAAGCCCTAGAACTTACCCTCATTG
GACAAGAAGAGATCACTCTTGCCAGCTTGTGCTGCCACAATCTTCGCCCT
ATGAGCATCCATTTTCAGACCCCATCCAGTGGCGTGGACTCCTTTTTTAC
CGTCAGGCACTCAACATGCGGGGATGGTTTGTGCTACCCTCTGCAACCTT
TGGAACTCTTCTCCAATGACAAAATTAATGACGCGCCTAGGCTTGTTGGC
CGAATCCGCGATGACCATTGCGACCACATCTGGGAACGCTTAAACTGCAT
GTACATCACTGACATTGAGACCAGGTCTTCCCACAAAAAATTCAAGAGGG
CCTACTCGATCCGTGTGAACAAGGGATGCTCTGGGGGAACCGTACAAAAC
TTCTGCGCCCCCTCATGTTTCAGAGGGGATGCTGTGTACGACATTCTTAA
CGCCCGCGGAAAAGTCGTGGCCCATCTCCAGGAGAGGTTTAACCCTGAGT
GCATCTCAGTTTCGCCTTTCAGTACCTACCTATTGGCGTTCCCGGATGGC
TCTGGGGTTGATGAGAGAGCACTTCTGGTGGCTGCCCTACTGAGTATAGA
AATGCGGACACCGTCAGGTAGGACGGTCTGCTAA
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