mRNA_D-mesarthrocarpus_Contig103.2.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Match: A0A6H5JA70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA70_9PHAE) HSP 1 Score: 220 bits (561), Expect = 9.310e-67 Identity = 119/201 (59.20%), Postives = 150/201 (74.63%), Query Frame = 2
Query: 101 SSCAQTRGSMLKHVAVTTAGL----LIGASLSPTLPAAADNTLIATKNSYFRYVPRILESMKWYQGDLRQAVLAEDWPHVMTYFEVVNTAKSDSKRPAMYQSSSSLIERDLLSPLTIWSQSFAPKGTGPTMRALQQQENALEAAMKTLGKVARDDYKLSAGETRGQVAMASWEAGRDAMKQYVEIANKGLVRQLRKIETPF 691
SS + +R +L+ + AG L GA SP LPA ADN L ATK SYFRYVPRIL++M WY+GDL+QA+ EDWP V+ YFEVVNTA+SDS RPAMYQSSSS ++R+L SPL++W+QS + KGTG +RAL QE LE AM +L K A L GE++GQ A+A+WEAGRDA+++YVE+ANKG+VR LRKI+TPF
Sbjct: 54 SSSSSSRSEVLRELGRYAAGAGVLSLAGACGSP-LPALADNALAATKKSYFRYVPRILDAMAWYEGDLQQAIAEEDWPKVLAYFEVVNTARSDSSRPAMYQSSSSRMQRELFSPLSVWAQSMSIKGTGQ-LRALLSQEEKLEQAMASLEKAA-SGKGLKEGESQGQAAIAAWEAGRDALQEYVEVANKGMVRSLRKIDTPF 251
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Match: D8LLR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR8_ECTSI) HSP 1 Score: 179 bits (454), Expect = 3.020e-52 Identity = 87/141 (61.70%), Postives = 111/141 (78.72%), Query Frame = 2
Query: 269 MKWYQGDLRQAVLAEDWPHVMTYFEVVNTAKSDSKRPAMYQSSSSLIERDLLSPLTIWSQSFAPKGTGPTMRALQQQENALEAAMKTLGKVARDDYKLSAGETRGQVAMASWEAGRDAMKQYVEIANKGLVRQLRKIETPF 691
M WY+GDL++A+ EDWP V+ YFEVVNTA+SDS RPAMYQSSSS ++R+L SPL++W+QS + KGTG +RAL QE LE AM +L K A L GE++GQ A A+WEAGRDA+++YVE+ANKG+VR LRKI+TPF
Sbjct: 1 MAWYEGDLQKAIAEEDWPKVLAYFEVVNTARSDSSRPAMYQSSSSRMQRELFSPLSVWAQSMSIKGTGAKLRALLSQEEKLEQAMASLEKAA-SGKSLKEGESQGQAAKAAWEAGRDALQEYVEVANKGMVRSLRKIDTPF 140
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Match: A0A7S3Y028_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y028_HETAK) HSP 1 Score: 111 bits (278), Expect = 3.810e-25 Identity = 75/208 (36.06%), Postives = 107/208 (51.44%), Query Frame = 2
Query: 134 KHVAVTTAGLLIGASLSPT------LPAAADNTLIATKNSYFRYVPRILESMKWYQGDLRQAVLAEDWPHVMTYF--EVVNTAKSDSKRPAMYQSSSSLIERDLLSPLTIWSQSFAPKGTGPTMRALQQQENALEAAMKTLGKVARDDYKL-----------------SAGETRGQVAMASWEAGRDAMKQYVEIANKGLVRQLRKIE 682
K V V+ L GA ++ T AD +L A K YFRYVPR+ + +Y DL++A+ +DW V F EV+ S P ++S +RDL +P+TIWS +FA KG ALQ+QE LE A+ + +VA D + G+++ Q+A+ SWE GR A+ Y+EIAN GL R+L K+E
Sbjct: 34 KTVVVSRRDFLAGAGVAATGLVLAPHSVLADMSLPAAKQLYFRYVPRLNDGKSFYANDLKKAIDDQDWEAVKKTFVKEVIVQPTSKKYNPP----ATSKWDRDLTTPMTIWSSTFAEKGVSKKTTALQEQEQLLETALAKIERVAGGDLTALPTGGGFLGFGTKSEDTNKGKSQKQIALESWEEGRTAINTYIEIANFGLSRELNKLE 237
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Match: A0A7S2ZQP9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZQP9_9RHOD) HSP 1 Score: 110 bits (274), Expect = 1.070e-24 Identity = 67/176 (38.07%), Postives = 97/176 (55.11%), Query Frame = 2
Query: 164 LIGASLSPTLP--AAADNTLIATKNSYFRYVPRILESMKWYQGDLRQAVLAEDWPHVMTYFEVVNTAKSDSKRPAM-YQSSSSLIERDLLSPLTIWSQSFAPKGTGPTMRALQQQENALEAAMKTLGKVARDDYKLSAGETRGQVAMASWEAGRDAMKQYVEIANKGLVRQLRKIE 682
+ G ++ LP A+A+ L+A K SYFRYVPRI E + +Y L AV A DW V F + A+ S++ ++++ER+ P+ WS SFA KGT P RA+ + +A E M L K ++ + A ASWE GR + +Y++IANKGL R+LRK+E
Sbjct: 38 IAGVAIVNGLPKEASANVNLMAAKRSYFRYVPRIEEGINYYMLALSPAVNAGDWGKVSQAFVKTSVAREGSEKALNDIDPKTTILEREFFVPMRTWSNSFAEKGTSPKSRAMLVKVDAFEKEMDKLKKATKNQNQADAS--------ASWELGRTVLNEYIDIANKGLSRELRKLE 205
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Match: A0A4D9DBP4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBP4_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.290e-13 Identity = 62/195 (31.79%), Postives = 94/195 (48.21%), Query Frame = 2
Query: 167 IGASLSPTLPAA--ADNTLIATKNSYFRYVPRILESMKWYQGDLRQAVLAEDWPHVMTYFEVVNTAKSDSKR--PAMYQSSSSLIERDLLSPLTIWSQSFAPKGTGPTMRALQQQENALEAAMKTLGKVARDDYKLS-------------------AGETRGQVAMASWEAGRDAMKQYVEIANKGLVRQLRKIE 682
+GA+L P A A+ TL + K YFRY PRI + + D + A+ +DW V +E+ A S R P + + E+DL SP+ I+SQS + KG P + AL + E LEAA+ L VA+ D K AG + ++A A + + A +VE+ NKG++ ++ K E
Sbjct: 34 VGAALLIGRPEASEAETTLASRKVLYFRYAPRIKSARDFLAKDFKAALDKKDWAAVAAAYEIQKQAPDSSLRNNPQRFINK---FEKDLYSPMRIFSQSLSEKGASPKLTALLKAEGELEAALDRLQLVAKGDLKPPKKDGGFLGFGGGAPVEDKYAGLNQEKMAKALFADAKTAFNAWVEVVNKGII-EVNKFE 224
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Match: W7UB75_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UB75_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.340e-11 Identity = 59/185 (31.89%), Postives = 87/185 (47.03%), Query Frame = 2
Query: 167 IGASLSPTLPAA--ADNTLIATKNSYFRYVPRILESMKWYQGDLRQAVLAEDWPHVMTYFEVVNTAKSDSKR--PAMYQSSSSLIERDLLSPLTIWSQSFAPKGTGPTMRALQQQENALEAAMKTLGKVARDDYKLS-------------------AGETRGQVAMASWEAGRDAMKQYVEIANK 652
+GA+L P A A+ TL + K YFRY PRI + + D + A+ +DW V +E+ A S R P + + E+DL SP+ I+SQS + KG P + AL + E LEAA+ L VA+ D K AG + ++A A + + A +VE+ NK
Sbjct: 87 VGAALLIGRPEASEAETTLASRKVLYFRYAPRIKSARDFLAKDFKAALDKKDWAAVAAAYEIEKQAPDSSMRNNPQRFINK---FEKDLYSPMRIFSQSLSEKGASPKLTALLKAEGELEAALDRLQLVAKGDLKPPKKDGGFLGFGGGAPVEDKYAGLNQEKMAKALFADAKTAFNAWVEVVNK 268 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig103.2.2 >prot_D-mesarthrocarpus_Contig103.2.2 ID=prot_D-mesarthrocarpus_Contig103.2.2|Name=mRNA_D-mesarthrocarpus_Contig103.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=206bp MLSTKDSYSSCAQTRGSMLKHVAVTTAGLLIGASLSPTLPAAADNTLIATback to top mRNA from alignment at D-mesarthrocarpus_Contig103:4432..9410- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig103.2.2 ID=mRNA_D-mesarthrocarpus_Contig103.2.2|Name=mRNA_D-mesarthrocarpus_Contig103.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4979bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig103:4432..9410- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig103:4432..9410- >mRNA_D-mesarthrocarpus_Contig103.2.2 ID=mRNA_D-mesarthrocarpus_Contig103.2.2|Name=mRNA_D-mesarthrocarpus_Contig103.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=618bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig103:4432..9410- (Discosporangium mesarthrocarpum MT17_79)back to top |