mRNA_D-mesarthrocarpus_Contig10277.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10277.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10277.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: D8LNH8_ECTSI (Anaphase-promoting complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNH8_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 1.620e-88
Identity = 138/201 (68.66%), Postives = 159/201 (79.10%), Query Frame = 1
Query:   31 MLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERLAMQQ-GHSNKEGANQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKG-PGKKYCLIEDQASH 627
            MLADKLVGNL YDTD+EV NLELLKLRFGE+SMH CE+MVRDLEESKRVNANV +RLA +Q G + KE A QHFWP LLG+DMRLHP M   +  F +AYSVIKNPRLLVWKKQLGVV+L L F  VERSFSVSPLHATLIMHF  K E    W L  LA EV LPP++++K++MLWVNQGV+ +  PG  Y L++DQ  +
Sbjct:    1 MLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIMVRDLEESKRVNANVQDRLAQRQTGEAQKEDARQHFWPHLLGEDMRLHPRMQDRLAAFGKAYSVIKNPRLLVWKKQLGVVELNLDFNGVERSFSVSPLHATLIMHFEGKAET---WRLSDLAREVELPPSVVQKRMMLWVNQGVVSESNPGPVYRLVKDQTQN 198          
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A6H5KJM3_9PHAE (Anaphase-promoting complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM3_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 2.080e-88
Identity = 144/219 (65.75%), Postives = 169/219 (77.17%), Query Frame = 1
Query:    1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERLAMQQ-GHSNKEGA--------NQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKG-PGKKYCLIEDQASH 627
            +ELFVTEYRLMLADKLVGNL YDTD+EV NLELLKLRFGE+SM  CE+MVRD+EESKRVNANV +RLA +Q G + KE A        +QHFWP LLG+DMRLHP M   +  F +AYSVIKNPRLLVWKKQLG+V+L L F  VERSFSVSPLHATLIMHF  K E    W L  LA EV LPP++++K++MLWVNQGV+ +  PG  Y L++DQ  +
Sbjct:  152 KELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMRHCEIMVRDVEESKRVNANVQDRLAQRQTGEAQKEDARCLDAVMVSQHFWPHLLGEDMRLHPRMQDRLAAFGKAYSVIKNPRLLVWKKQLGMVELNLEFNGVERSFSVSPLHATLIMHFEGKAET---WRLSDLAREVELPPSVVQKRMMLWVNQGVVSESNPGPVYRLVKDQTQN 367          
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A7S0GLJ3_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLJ3_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.760e-56
Identity = 98/212 (46.23%), Postives = 140/212 (66.04%), Query Frame = 1
Query:    1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERLAMQQGHSNKEGANQ----------------H-FWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFEN---VERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVL 576
            QELFV EYR+MLAD+L+ NLD++TDREVH LELLKLRFGESSM QCE+M++DL++SKR+ +N++  +A + G   +   +Q                H FWP LL DD+++HP M + +D+FS+ YS +K PR L+W  QLG V++ L  +      ++F+ SP+HATLI HF DK    + W+   L+ E  LP  L++KKL+ WV+  +L
Sbjct:  126 QELFVNEYRVMLADRLLSNLDFNTDREVHTLELLKLRFGESSMRQCEIMIKDLDDSKRIISNINSTIANRDGAQQQNHTDQVKPDSSATVVDAAIVSHIFWPALLQDDLKVHPKMQEHLDQFSKEYSKLKKPRKLIWLNQLGTVEVELEMDESGATPKTFTCSPIHATLISHFEDK----SMWTAADLSNETNLPEKLVKKKLIYWVHNRIL 333          
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: K3X5T3_GLOUD (Anaphase-promoting complex subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5T3_GLOUD)

HSP 1 Score: 198 bits (504), Expect = 7.340e-56
Identity = 95/214 (44.39%), Postives = 139/214 (64.95%), Query Frame = 1
Query:    1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERLAMQQGHSNKEGAN------------QHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKKYCL 606
            +ELFV EYR+MLADKL+ NL+Y+TDR+V  LELLKLRFGE S+ QCE+MVRD+E+SKR+N N+      +   +  + A+            QHFWPP  GD+  LHP +S  +DE+ ++Y V++NPR L W   LG VQL++  + VER FSVSPL A++++HF D+ +    W +  LA ++ +  +L+ K   +W+N G+L   P +K  +
Sbjct:  463 RELFVNEYRMMLADKLLQNLEYNTDRDVQTLELLKLRFGEESLQQCEIMVRDIEDSKRINLNIQSTRTKKTAVTTSDAASKPLVHVDATIVSQHFWPPFQGDEFVLHPKVSSDIDEYKKSYEVLRNPRSLAWNPSLGSVQLSIELQGVERDFSVSPLQASIVLHFEDQDQ----WEVEALAAKLEISDDLLLKHTSVWINHGLLTFSPDRKVLI 672          
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A833WHR5_PHYIN (Anaphase-promoting complex subunit 2 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WHR5_PHYIN)

HSP 1 Score: 196 bits (498), Expect = 5.210e-55
Identity = 104/225 (46.22%), Postives = 140/225 (62.22%), Query Frame = 1
Query:    1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERLAMQ--------QGHSNKEG------------------ANQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKK 597
            +ELFV EYR+MLADKL+ NL++DTDR+V  LELLKLRFGE S+ QCE+MVRD+E+SKR+N NV   L           QG S +E                    +Q FWPPL GDD  LHP +SK +D F +AY V++NPR L W   LG VQL++  E  ER F+VSPL AT+I++F +K      WS+  LA ++ +  +++ K + LWVN G++    G+K
Sbjct:  449 RELFVNEYRMMLADKLLQNLEFDTDRDVQTLELLKLRFGEDSLQQCEIMVRDIEDSKRLNGNVQSTLERSGATAIVAVQGSSGEEAKELFAQPGAPSTRIDATIVSQQFWPPLQGDDFVLHPKVSKDIDAFKDAYHVLRNPRSLEWNTSLGSVQLSIELEGEEREFNVSPLQATMILYFEEKDR----WSVEELATKLEISADVLLKHVSLWVNHGLVSFASGRK 669          
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A225VZU6_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VZU6_9STRA)

HSP 1 Score: 193 bits (491), Expect = 3.620e-54
Identity = 96/199 (48.24%), Postives = 135/199 (67.84%), Query Frame = 1
Query:    1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERLAMQQGHSNKEGANQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKK 597
            +ELFV EYR+MLADKL+ NL++DTD +V  LELLKLRFGE S+HQCE+MVRD+E+SKR+N NV   +   +  ++    +  FWPPL G+D  LH  +SK +D F +AY V++NPR L W   LG VQL++  E V R F+VSPL AT+I++F DK      W++  LA ++ +   ++ K + LWVN G++    G+K
Sbjct:  444 RELFVNEYRMMLADKLLQNLEFDTDLDVQTLELLKLRFGEDSLHQCEIMVRDIEDSKRLNLNVQSTM---EHPADATIVSHQFWPPLQGEDFMLHQTISKDIDAFKDAYHVLRNPRSLDWNPSLGSVQLSIDLEGVVREFTVSPLQATIILYFEDKDR----WNVEELAAKLEISDEVLLKHVSLWVNHGLVSFASGRK 635          
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A8J5MDA6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MDA6_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.380e-53
Identity = 100/225 (44.44%), Postives = 136/225 (60.44%), Query Frame = 1
Query:    1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHE-------------------RLAMQQGHSNKEGA-------NQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKK 597
            +ELFV EYR+MLADKL+ NL +DTDR+V  LELLKLRFGE S+ QCE+MVRD+E+S+R+N NV                         Q GHS            +Q FWPP  G+D  LHP MSK +D F +AY V++NPR L W   LG VQL++  +  ER F+VSPL AT++++F +K      WS+  LA ++ +  +L+ K + LWVN G++    G+K
Sbjct:  360 RELFVNEYRMMLADKLLQNLQFDTDRDVQTLELLKLRFGEDSLQQCEIMVRDIEDSRRLNVNVQSTAEKPEANATLAAEASSGRETESQLGHSGTPSTRVDATIVSQQFWPPFQGEDFTLHPKMSKDIDAFKDAYHVLRNPRSLEWNPSLGSVQLSIELQGEEREFNVSPLQATIVLYFEEKDR----WSVEELAAKLEISDDLLLKHVSLWVNHGLVSFASGRK 580          
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A0P1AJ53_PLAHL (Anaphase-promoting complex subunit 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ53_PLAHL)

HSP 1 Score: 192 bits (487), Expect = 1.680e-53
Identity = 99/217 (45.62%), Postives = 140/217 (64.52%), Query Frame = 1
Query:    1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANV---HERLAMQQ--------GHSNKEGA-------NQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKK 597
            +ELFV EYR+MLADKL+ NL++DTDR+V  LELLKLRFGE S+ QCE+MVRD+++SKR+N N     E  A+ +         HS    +       +Q FWPPL G+D +LH  +SK +D F EAYSV++NPR L W   LG VQL++  EN  R F++SP+ AT+I+HF DK      W +  LA ++ +  +L+ K + +W+N G++    G+K
Sbjct:  445 RELFVNEYRIMLADKLLQNLEFDTDRDVQTLELLKLRFGEDSLQQCEIMVRDVDDSKRLNRNALSAMENFAIMKEASTDNSLAHSTTPSSYVDATIVSQQFWPPLQGEDFKLHSKVSKDIDAFKEAYSVLRNPRSLDWNASLGSVQLSIELENEVREFTLSPIQATIILHFEDKNR----WKIEELAAQLEISDDLLLKHISVWINHGLISFASGRK 657          
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A3R7GZZ8_9STRA (Anaphase-promoting complex subunit 2 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GZZ8_9STRA)

HSP 1 Score: 190 bits (483), Expect = 4.340e-53
Identity = 104/226 (46.02%), Postives = 139/226 (61.50%), Query Frame = 1
Query:    1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERL----------AMQQGHSNKE------GANQ-----------HFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKK 597
            +ELFV EYR+MLADKL+ NLDYDTDR+V  LELLKLRFGE S+ QCE+MVRD+E+SKR+N N    L          AM +    KE      G +Q            FWPPL GD   +HP+MSK +D F +AY V++NPR L W   LG VQL +  E  ER F+VSPL A++I++F +K      WS+  L+ ++ +  +L+ K   +WVN G++   PG+K
Sbjct:  401 RELFVNEYRMMLADKLLQNLDYDTDRDVQTLELLKLRFGEESLQQCEIMVRDIEDSKRLNLNARSVLEKPEAKAAAAAMARAGEEKEIDAGRCGVSQTALVDATIISQQFWPPLQGDVFTVHPSMSKGIDAFKDAYHVLRNPRSLEWNPSLGSVQLLIELEGEEREFTVSPLQASIILYFEEKDR----WSVDELSAKLEVDDDLLLKHTSVWVNHGLVAFAPGRK 622          
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A2P4YMB7_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YMB7_9STRA)

HSP 1 Score: 191 bits (484), Expect = 5.110e-53
Identity = 101/228 (44.30%), Postives = 141/228 (61.84%), Query Frame = 1
Query:    1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERL--------AMQQGHSNKEG---------------------ANQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKK 597
            +ELFV EYR+MLADKL+ NL++DTDR+V  LELLKLRFGE S+ QCE+MVRD+E+SKR+N NV   +        A  +G   ++                       +Q FWPPL G+D  LHP +SK +DEF  AY V++NPR L W   LG VQL+++ E  ER F+VSPL AT+I++F +K      W++  LA ++ +  +L+ K + LWVN G++    G+K
Sbjct:  449 RELFVNEYRMMLADKLLQNLEFDTDRDVQTLELLKLRFGEDSLQQCEIMVRDIEDSKRLNLNVQSTMENSAAKAAAATEGRPERKTKAQPDGSVGPGTQATRVDATIVSQQFWPPLQGEDFTLHPQVSKDIDEFKNAYHVLRNPRSLDWNPSLGSVQLSINLEGEEREFTVSPLQATIILYFEEKDR----WNVEELAAKLEISDDLLLKHVSLWVNHGLVSFALGRK 672          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNH8_ECTSI1.620e-8868.66Anaphase-promoting complex subunit 2 n=1 Tax=Ectoc... [more]
A0A6H5KJM3_9PHAE2.080e-8865.75Anaphase-promoting complex subunit 2 n=1 Tax=Ectoc... [more]
A0A7S0GLJ3_9STRA2.760e-5646.23Anaphase-promoting complex subunit 2 n=1 Tax=Probo... [more]
K3X5T3_GLOUD7.340e-5644.39Anaphase-promoting complex subunit 2 n=1 Tax=Globi... [more]
A0A833WHR5_PHYIN5.210e-5546.22Anaphase-promoting complex subunit 2 n=2 Tax=Phyto... [more]
A0A225VZU6_9STRA3.620e-5448.24Anaphase-promoting complex subunit 2 n=1 Tax=Phyto... [more]
A0A8J5MDA6_9STRA1.380e-5344.44Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A0P1AJ53_PLAHL1.680e-5345.62Anaphase-promoting complex subunit 2 n=1 Tax=Plasm... [more]
A0A3R7GZZ8_9STRA4.340e-5346.02Anaphase-promoting complex subunit 2 n=3 Tax=Phyto... [more]
A0A2P4YMB7_9STRA5.110e-5344.30Anaphase-promoting complex subunit 2 n=1 Tax=Phyto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10277contigD-mesarthrocarpus_Contig10277:537..4066 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LNH8
Preferred nameAPC2
PFAMsANAPC2,Cullin
Model size627
Max annot lvl2759|Eukaryota
KEGG koko:K03349
KEGG Pathwayko04110,ko04111,ko04113,ko04114,ko04120,ko04914,ko05166,map04110,map04111,map04113,map04114,map04120,map04914,map05166
KEGG ModuleM00389
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000152,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005680,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009553,GO:0009561,GO:0009987,GO:0010498,GO:0015630,GO:0016567,GO:0019538,GO:0019899,GO:0019941,GO:0030163,GO:0031145,GO:0031461,GO:0031625,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0048229,GO:0048856,GO:0051603,GO:0070647,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1990234
Exons5
Evalue1.81e-89
EggNOG OGsKOG2165@1|root,KOG2165@2759|Eukaryota
Descriptionubiquitin protein ligase binding
Cds size597
COG categoryS
BRITEko00000,ko00001,ko00002,ko03036,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10277.1.1prot_D-mesarthrocarpus_Contig10277.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10277 537..4036 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789168.9354517-CDS-D-mesarthrocarpus_Contig10277:536..6771680789168.9354517-CDS-D-mesarthrocarpus_Contig10277:536..677Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10277 537..677 -
1680789168.9488575-CDS-D-mesarthrocarpus_Contig10277:1436..15531680789168.9488575-CDS-D-mesarthrocarpus_Contig10277:1436..1553Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10277 1437..1553 -
1680789168.9627666-CDS-D-mesarthrocarpus_Contig10277:2138..22681680789168.9627666-CDS-D-mesarthrocarpus_Contig10277:2138..2268Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10277 2139..2268 -
1680789169.0174606-CDS-D-mesarthrocarpus_Contig10277:3025..31171680789169.0174606-CDS-D-mesarthrocarpus_Contig10277:3025..3117Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10277 3026..3117 -
1680789169.028272-CDS-D-mesarthrocarpus_Contig10277:3919..40361680789169.028272-CDS-D-mesarthrocarpus_Contig10277:3919..4036Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10277 3920..4036 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789169.0389013-UTR-D-mesarthrocarpus_Contig10277:4036..40661680789169.0389013-UTR-D-mesarthrocarpus_Contig10277:4036..4066Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10277 4037..4066 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10277.1.1

>prot_D-mesarthrocarpus_Contig10277.1.1 ID=prot_D-mesarthrocarpus_Contig10277.1.1|Name=mRNA_D-mesarthrocarpus_Contig10277.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=199bp
MLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVN
ANVHERLAMQQGHSNKEGANQHFWPPLLGDDMRLHPAMSKTMDEFSEAYS
VIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVI
APWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKKYCLIEDQASH
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mRNA from alignment at D-mesarthrocarpus_Contig10277:537..4066-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10277.1.1 ID=mRNA_D-mesarthrocarpus_Contig10277.1.1|Name=mRNA_D-mesarthrocarpus_Contig10277.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3530bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10277:537..4066- (Discosporangium mesarthrocarpum MT17_79)
CAGGAGCTGTTTGTGACTGAGTACCGCCTGATGCTGGCAGACAAGCTGGT TGGCAACCTGGACTACGACACCGATCGAGAGGTTCATAACCTGGAGCTCC TCAAGCTCCGCTTTGGGGAGTCTAGCATGCACCAGTGCGAGGTTATGGTA CGCCTGCCGCAGGGTGAACGCCCAAGAATTTTTTTTTATTTTCATGCATC TCGTAGCGTTTTTTCATTTCAGCCCCGTGCAACAACGCCGTGAGACAACT GCGCCGTCCAAGCGCGGGTTTGTTCTTCTCACTCGGACGCAGGCAAACCC TAACCCTAACCCCAACCCTAACCCTAACCCTAACCCCAACCCTAACCCCA ACCCCAACCCTAACCCTAACCCTAACCCTAACCCTAACCCCAACCCTAAC CCTAACCCTAACCCTAACCCAGTAATTTCGAACGGGTAGCCATGCAGCAG GGCAGGATTCTAAAGGAGGAAGTGTTGGAAGTGCAGCCGAGGGGTGAAGC AGGGCCGAGGCTTACTTGGGGGGCGAGTGCATCCTGTGCTATGGGTTAGG GTTAGGGTTACTTGGGGGGGTTGGATGTTGGCCAGCGATGGGGGAGGAAG AGCTGTAGCTACTGGGTACTATGACCTCGACGGTTAGGGTTAGAACTAGG CTCGGGGTTTGAGGTGACGGCTGACTGCGAGCCGCCCTCGAAATGCCTCA TCTTGTGTGGGTATTTGGCTGCCTGTATGGGTATAAAAGCAATGCCTTAA CTAACACAATTTTTTTCTCGCACGAAAAAAGAAAAAAAAAAAGAAAGCAC AGGCGGGTCAACTGCTCTACTGCACGTGCCTCACCACCTAAGCCGTGCCT AGGCCAGGGGTGGTGCTAGAAACTAATCCGCCCCCTGCCCCATGTCGTTC TGGAACCCTGTGCTCGTCCCTCGATCTAACCCTAACCCTAACCCTGCAGG TGCGTGACCTAGAGGAGTCCAAGCGGGTCAACGCCAATGTGCATGAGCGA CTGGCAATGCAGCAGGGTCACAGCAATAAGGAGGGTGCCAAGTGAGCTCT ACATACAAAGCATTATGTTACCGTAGTACCAGGTATTGCTACATGCAAAG CATTATGTTACCGTAGTACCAGGTATTGCCTAGAACAGAGTTCTCGCCAC CTGTGACCAGGGTGTTGTCTTCAGATCGTCGAGCGGTCCAATTCCCCAGT TTGATCGACACTTGACGGCAAGCAACAGAGCGACGGGTAGGTGCTCGAGC ACCATTGTTAGGGTTAGGGATAGGGTTAGGGATAGGGTTAGGGTTGGGGT ATGGTTAGGGTTAGGGTTTGATTTTGTGATGGAGCGATGGGTAAGCACTC GAGCACGGTCATTGGGGTTGGGGTTAGGGTTAGTTCGAATTTACAATAAT GGTAGTAGTAATACAGCTATAGGGTTAGGGTTAGGGATAATACAAAGTAA CAAATAATCGTAGTAGTAATAAAGCTTTAGGGTTAGGGTTAGAACTTCTC TGGTTGGGCTTTGCCCTGTTTTTCTTGTTTCCTTCCTTTGTGGGTGGCAT TCCGGACGCCACTCTGTGGCTGGGGCTGGGATTTCAGAGTTCCCCGGGAG ATAGAGCCAGTTTTAAGTCAATAGAGCCGGTTTTTAGGTAAGGGTTTGGG TAAGGGTTACGCAGGGAAGAAAGGTTACTGCCCCCGCCCACAACCCATTA TGTCAACATCAAGTCAATCATGTCCCGTCTTGGGCCTACAGAAGCTACCT CTGCTACCCTCCCCCCTCACCAAGGTGCCTGGATGCAGTGATGGTGAGCC AGCACTTCTGGCCGCCGCTGCTTGGGGATGACATGCGCCTGCACCCGGCA ATGAGCAAGACCATGGATGAGTTTAGCGAGGCCTACTCTGTGATAAAGAA TCCCCGTCTCCTGGTCTGGAAGAAGCAGGTGAGGCATGCGACAGCTTCAT GCCCCCCCCCCCCCTCACCCACCCATGTGCTTGACCTTGATGCCAAGAGG AAGAGCTGCAGACTGGGAGGAGAAGCCCGGGTTGCCGGGTGCCCTACCTG CCCTCTTTGCGCTTTGGGCGTTAGCTCTGCTTGATGTTTTGGTTGGGGTG AGGTTGCCCCATGGAGCGTGGCCTTCCTCTGCGGAGGAATCAGCCCTGGT CCCAGCAAAGGTCTGCCCTCTGAGAAGTAACAAATGCCTCTCTGTGGTGG TCCTGGTTTCCTCCAGAGGTCTCTGTCCAATGCTGTGGGTATGACCCCCT GCCAGTTTTTGAGCATATGACATGTGAAACCTGCCGTAGGGCTCTAGAGT TACTGTGGCGAATAATACATTGCCCCGGCCAACCCTAACCCTTAACCCTA ATACTCTGTGACTCTGCCCCCGACCTGCCCTCATTTTGTGACTTGCTCAG CACGAGTCCTGCACCTATCAGCACCGTTTGAAGTGGATGTAATTGGATGC TTCAGAGTGCCACATGCCCCCTCGATCACTGTTCCCCCCTCCATGCGCCC CTTGACTTTGCAGCTGGGGGTGGTTCAGCTGACCCTCTCCTTTGAGAACG TGGAGAGGTCTTTCTCCGTGTCGCCACTGCACGCGACGCTGATCATGCAT TTTTCCGACAAGCCGGAGGTGATTGCTCCTGTACCTGTTCTCTCCTGATT GAGACTTGAATTGCCTTCTGGTCTCATGGTTTGTGGTGGCGGGCACGAAC TAGGGCTCTTGGATGCAAAAAGTGGCTGACCAGGCCCTGTGCCGTGCTTG GAAGACGCAACTAGTGAAGACATGCCTGGGTCTTTCTATTCTCTTTCCTG AAAAAGTGCCAACCCTAACCCAAGTCCTAATCCCGATTCCTGTGGGATGG TTCTCGGCGTCGAAGGAATGCTGCATGCAAAGGGCAGACAACCGTGGCGA GTAAACACCTGACATAAGACTCTGCTGAAAGAGGATTAGCAATGCTCAAT ATCGTACTGAACAGAGCTTCTGTAGTGCAGCACTGATCCCTGGGTAATTG AAAGCCTGGTGGAGATGAGCGTTCTAAAAACAGAGATTTTCCGGGGGACT TTGTATCAACAGTGGCTGCTGGTTTTCAGTTCTCCCCCGTGCTCACTGCC TGATGGATCAGCTGTTCGCGTGTTCTTCTCAGTACCTGTTTTGTTAGCCT TCTCTGATCCCGCCTTTTGCCCTGTCTACTACTGTGACAAGTTATTGGCA ACGCAAACGGTTTTTCTTCTTAATTCACTGAAGCGCTCCAAGTTTTTTAT AACCCTAAATGAACGCCAACCCTGACCCTATTCCTAACTCAGACATTTAC TTTGTGCCCTAGAGCTTCACAGTGGTGCAAATGTCCCAACCCTAATCCTA GCCCTAACCCTAGCCTGTTCTTGGTCTCCCCTGTTCAAGTGGAGCCTTCC GACTTTGGCTGAGGAAGTGGGCCTGCCACCCAACCTCATTGAGAAAAAGC TGATGCTCTGGGTCAACCAGGGCGTATTGGGGAAGGGACCTGGCAAGAAA TATTGCCTCATTGAGGACCAGGCAAGCCAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10277:537..4066-

>mRNA_D-mesarthrocarpus_Contig10277.1.1 ID=mRNA_D-mesarthrocarpus_Contig10277.1.1|Name=mRNA_D-mesarthrocarpus_Contig10277.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=597bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10277:537..4066- (Discosporangium mesarthrocarpum MT17_79)
ATGCTGGCAGACAAGCTGGTTGGCAACCTGGACTACGACACCGATCGAGA
GGTTCATAACCTGGAGCTCCTCAAGCTCCGCTTTGGGGAGTCTAGCATGC
ACCAGTGCGAGGTTATGGTGCGTGACCTAGAGGAGTCCAAGCGGGTCAAC
GCCAATGTGCATGAGCGACTGGCAATGCAGCAGGGTCACAGCAATAAGGA
GGGTGCCAACCAGCACTTCTGGCCGCCGCTGCTTGGGGATGACATGCGCC
TGCACCCGGCAATGAGCAAGACCATGGATGAGTTTAGCGAGGCCTACTCT
GTGATAAAGAATCCCCGTCTCCTGGTCTGGAAGAAGCAGCTGGGGGTGGT
TCAGCTGACCCTCTCCTTTGAGAACGTGGAGAGGTCTTTCTCCGTGTCGC
CACTGCACGCGACGCTGATCATGCATTTTTCCGACAAGCCGGAGGTGATT
GCTCCTTGGAGCCTTCCGACTTTGGCTGAGGAAGTGGGCCTGCCACCCAA
CCTCATTGAGAAAAAGCTGATGCTCTGGGTCAACCAGGGCGTATTGGGGA
AGGGACCTGGCAAGAAATATTGCCTCATTGAGGACCAGGCAAGCCAC
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