mRNA_D-mesarthrocarpus_Contig1027.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1027.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig1027.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1027.3.1 vs. uniprot
Match: A0A6H5KS33_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KS33_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 5.810e-52
Identity = 85/119 (71.43%), Postives = 104/119 (87.39%), Query Frame = 2 
Query:  200 RSSSLEFLQNFARGCKNPRMKQHSKRSQTGLYAGKDIRFGNTISFSNKKSRRTWKPNVQLKRLWSETLEKWIRFHVTTHALRCVENAGGIDRYLLKMPDRWLNSVEGTRAKREIEAAIA 556
            R +++  LQ  ARGCKNP+  QHSKRSQ GLYAGKDI FGNTISFS+KK+RRTWKPNVQ K L+SETL++WI+F++TTHALRCV+ AGGID+YLLK PD WLNSV+G++AKR+IE A+A
Sbjct:    5 RRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRKIEEALA 123
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1027.3.1 vs. uniprot
Match: A0A7S3ZX50_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX50_9STRA)

HSP 1 Score: 136 bits (343), Expect = 7.660e-35
Identity = 66/101 (65.35%), Postives = 80/101 (79.21%), Query Frame = 2 
Query:  269 SKRSQTGLYAGKDIRFGNTISFSNKKSRRTWKPNVQLKRLWSETLEKWIRFHVTTHALRCVENAGGIDRYLLKMPDRWLNSVEGTRAKREIEAAIAGGKPN 571
            S RS+ G+YAGKDIRFGN ISFS++K+RRT+KPN Q KRLWSETL  W+RF++TTHALRC++ AGGID YLLK PD  L S+ G  A+R IEAA A   P+
Sbjct:   60 SNRSKRGIYAGKDIRFGNNISFSHRKTRRTFKPNAQRKRLWSETLGCWLRFNLTTHALRCIDRAGGIDAYLLKTPDAKLGSIAGANARRMIEAARASRDPS 160
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1027.3.1 vs. uniprot
Match: A0A7S2C450_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C450_9STRA)

HSP 1 Score: 122 bits (306), Expect = 9.530e-30
Identity = 56/96 (58.33%), Postives = 73/96 (76.04%), Query Frame = 2 
Query:  269 SKRSQTGLYAGKDIRFGNTISFSNKKSRRTWKPNVQLKRLWSETLEKWIRFHVTTHALRCVENAGGIDRYLLKMPDRWLNSVEGTRAKREIEAAIA 556
            S R+  GLY GKD+ FGN +S S +K+RR WKPNVQ KRLWSE+L  W++F+VTT A+RCV+ AGG+D YLL + D  + S++G  AKR IEAA+A
Sbjct:   42 SGRAARGLYGGKDVGFGNMVSHSERKTRRMWKPNVQKKRLWSESLGDWVKFNVTTQAMRCVDKAGGLDNYLLGLKDGKIGSIQGLAAKRRIEAALA 137
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1027.3.1 vs. uniprot
Match: A0A7S2RZD4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZD4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.980e-28
Identity = 52/92 (56.52%), Postives = 70/92 (76.09%), Query Frame = 2 
Query:  269 SKRSQTGLYAGKDIRFGNTISFSNKKSRRTWKPNVQLKRLWSETLEKWIRFHVTTHALRCVENAGGIDRYLLKMPDRWLNSVEGTRAKREIE 544
            S R+  GL+  KDIRFGN +S S +K+RR+WKPN Q KRLWSETLE++++F  TT+ L+C++  GG+D YLL+ PD+ LNS+ G  AKR IE
Sbjct:   18 SGRALRGLFGNKDIRFGNKVSHSERKTRRSWKPNAQNKRLWSETLEEFLKFKTTTYVLKCIDKVGGLDNYLLRTPDKKLNSITGLAAKRRIE 109
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1027.3.1 vs. uniprot
Match: A0A7S2HHC9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHC9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 8.670e-28
Identity = 52/91 (57.14%), Postives = 71/91 (78.02%), Query Frame = 2 
Query:  269 SKRSQTGLYAGKDIRFGNTISFSNKKSRRTWKPNVQLKRLWSETLEKWIRFHVTTHALRCVENAGGIDRYLLKMPDRWLNSVEGTRAKREI 541
            S R+  GL+ GKD+RFGN +S S +K+RR WKPNVQ K+LWSETL+ ++RF++T HA+RCV+ AGG+D YLL +PD+ L S +G  AK +I
Sbjct:   16 SGRALRGLFGGKDVRFGNKVSHSERKTRRMWKPNVQRKKLWSETLQDYLRFNMTVHAMRCVDKAGGVDNYLLAIPDKDLKSDQGLAAKCKI 106
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1027.3.1 vs. uniprot
Match: A0A7S3K4M7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4M7_9STRA)

HSP 1 Score: 114 bits (285), Expect = 8.280e-27
Identity = 51/94 (54.26%), Postives = 72/94 (76.60%), Query Frame = 2 
Query:  257 MKQH-SKRSQTGLYAGKDIRFGNTISFSNKKSRRTWKPNVQLKRLWSETLEKWIRFHVTTHALRCVENAGGIDRYLLKMPDRWLNSVEGTRAKR 535
            +K+H S R++ GLY  KD+R GN++SFS +K+RR WKPNVQ K+ WS+ L  W+RF VTTHA++C++  GGID+Y+L+ P+  LNS+ G  AKR
Sbjct:   32 VKRHGSNRAKRGLYHLKDVRSGNSVSFSERKTRRKWKPNVQTKKFWSQILCCWLRFKVTTHAIKCIDKKGGIDKYILETPESKLNSIAGNNAKR 125
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1027.3.1 vs. uniprot
Match: A0A7S2V663_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V663_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.150e-26
Identity = 59/122 (48.36%), Postives = 84/122 (68.85%), Query Frame = 2 
Query:  197 ARSSSLEFLQNFARGCKNPRMKQHSKRSQTGLYAGKDIRFGNTISFSNKKSRRTWKPNVQLKRLWSETLEKWIRFHVTTHALRCVENAGGIDRYLLKMPDR---WLNSVEGTRAKREIEAAI 553
            +R  S  FL NF RG         S R+  GLYAGKDIRFGN++S SN+K+RR++KPNV  KRLWS+ L++WI F V+ HALRC+++AGG+D Y+L+   +   W +S +  RA++E+  A+
Sbjct:    5 SRHVSFSFLSNFIRG---------SGRASRGLYAGKDIRFGNSVSHSNRKTRRSFKPNVFNKRLWSDILDRWIPFKVSAHALRCIDHAGGLDNYILRNSLKTGDW-DSTQAVRARKEMLEAL 116
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1027.3.1 vs. uniprot
Match: A0A835YSL8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSL8_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.080e-24
Identity = 60/118 (50.85%), Postives = 74/118 (62.71%), Query Frame = 2 
Query:  200 RSSSLEFLQNFARGCKNPRMKQHSKRSQTGLYAGKDIRFGNTISFSNKKSRRTWKPNVQLKRLWSETLEKWIRFHVTTHALRCVENAGGIDRYLLKMPDRWLNSVEGTRAKREIEAAI 553
            R S+++FL+ F R    P +  +S RSQ G+YAGKD+RFGN   FS KKSRR W PNVQ KRLWSE L + I   VTT ALR V+ AGG+D YLL   D  L S + +     +  AI
Sbjct:    6 RQSAVKFLEGFTRASSKPNL--YSNRSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAI 121
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1027.3.1 vs. uniprot
Match: I2CRI6_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRI6_NANGC)

HSP 1 Score: 105 bits (263), Expect = 1.480e-23
Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 2 
Query:  269 SKRSQTGLYAGKDIRFGNTISFSNKKSRRTWKPNVQLKRLWSETLEKWIRFHVTTHALRCVENAGGIDRYLLKMPDRWLNSVEGTRAKREIE 544
            S R++ GLYAGKD+ FGN +S SN+K+RR +KPN   KRLWS+TL+  I F++TT  LR V+  GG+D YLL+ PD  L+S  G + KR IE
Sbjct:   25 SNRARRGLYAGKDVLFGNKVSHSNRKTRRMFKPNAHHKRLWSDTLQDMIPFYLTTTTLRMVDKVGGLDNYLLQTPDHKLDSESGIKVKRRIE 116
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1027.3.1 vs. uniprot
Match: A0A662WLH2_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLH2_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.720e-23
Identity = 53/118 (44.92%), Postives = 76/118 (64.41%), Query Frame = 2 
Query:  203 SSSLEFLQNFARGCKNPRMKQHSKRSQTGLYAGKDIRFGNTISFSNKKSRRTWKPNVQLKRLWSETLEKWIRFHVTTHALRCVENAGGIDRYLLKMPDRWLNSVEGTRAKREIEAAIA 556
            SSS+ FL+ F R  K   +   S R+Q GL+AG+D RFGN +SFS +++RR WK N Q K L+SE L++ +  +VTTH LRCV+  GG+D YLL + D     V+G + +  +  A+A
Sbjct:    4 SSSMRFLEAFTRAAKREHV---SGRAQRGLFAGRDKRFGNNVSFSKRRTRRAWKVNHQWKTLYSEALDEKVGLNVTTHTLRCVDKIGGLDNYLLSIKDEAELGVKGLKTRDRVREALA 118
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1027.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KS33_9PHAE5.810e-5271.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3ZX50_9STRA7.660e-3565.35Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2C450_9STRA9.530e-3058.33Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RZD4_9STRA4.980e-2856.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2HHC9_9STRA8.670e-2857.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3K4M7_9STRA8.280e-2754.26Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2V663_9STRA2.150e-2648.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YSL8_9STRA1.080e-2450.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
I2CRI6_NANGC1.480e-2354.35Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A662WLH2_9STRA2.720e-2344.92Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1027contigD-mesarthrocarpus_Contig1027:5694..8526 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G9G5
PFAMsRibosomal_L28
Model size1340
Max annot lvl2759|Eukaryota
KEGG koko:K02902
KEGG Pathwayko03010,map03010
KEGG ModuleM00178
Hectar predicted targeting categoryother localisation
GOsGO:0000313,GO:0000315,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005761,GO:0005762,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0031974,GO:0032543,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0071704,GO:0098798,GO:0140053,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons4
Evalue1.45e-56
EggNOG OGsCOG0227@1|root,KOG3278@2759|Eukaryota
Ec32 ortholog descriptionRibosomal protein L28
Ec32 orthologEc-28_000830.1
Descriptionmitochondrial translation
Cds size510
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1027.3.1prot_D-mesarthrocarpus_Contig1027.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1027 6334..8336 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789168.1857164-UTR-D-mesarthrocarpus_Contig1027:5693..63331680789168.1857164-UTR-D-mesarthrocarpus_Contig1027:5693..6333Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1027 5694..6333 -
1680789168.2424781-UTR-D-mesarthrocarpus_Contig1027:8336..85261680789168.2424781-UTR-D-mesarthrocarpus_Contig1027:8336..8526Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1027 8337..8526 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789168.200542-CDS-D-mesarthrocarpus_Contig1027:6333..65591680789168.200542-CDS-D-mesarthrocarpus_Contig1027:6333..6559Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1027 6334..6559 -
1680789168.2128093-CDS-D-mesarthrocarpus_Contig1027:7179..72451680789168.2128093-CDS-D-mesarthrocarpus_Contig1027:7179..7245Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1027 7180..7245 -
1680789168.223282-CDS-D-mesarthrocarpus_Contig1027:7764..78601680789168.223282-CDS-D-mesarthrocarpus_Contig1027:7764..7860Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1027 7765..7860 -
1680789168.2328155-CDS-D-mesarthrocarpus_Contig1027:8214..83361680789168.2328155-CDS-D-mesarthrocarpus_Contig1027:8214..8336Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1027 8215..8336 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1027.3.1

>prot_D-mesarthrocarpus_Contig1027.3.1 ID=prot_D-mesarthrocarpus_Contig1027.3.1|Name=mRNA_D-mesarthrocarpus_Contig1027.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=170bp
MWARSSSLEFLQNFARGCKNPRMKQHSKRSQTGLYAGKDIRFGNTISFSN
KKSRRTWKPNVQLKRLWSETLEKWIRFHVTTHALRCVENAGGIDRYLLKM
PDRWLNSVEGTRAKREIEAAIAGGKPNPLARAMAIAQGSRLEGGEKLRDG
VKEGGPAQGGEQPEQSPRQ*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig1027:5694..8526-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1027.3.1 ID=mRNA_D-mesarthrocarpus_Contig1027.3.1|Name=mRNA_D-mesarthrocarpus_Contig1027.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2833bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1027:5694..8526- (Discosporangium mesarthrocarpum MT17_79)
GTTCGTTCGAAACCCCAAAACCATAAAAGATAGCAGACAAAAAAGCCAGT
GCGGATGGCCACCCAAGTAACAATCGCGCGGACGCGCGGAGGTTCAGACA
TCCCGTCCTCACCGCTTGTGAGGAACGCTGTCCTCTTGGAGGCATAGCTG
AGGTACCCAAAGATATTATCAGACGAATAGTGGGGTCAAGATGTGGGCTC
GGAGCTCATCGCTGGAATTCCTGCAGAATTTTGCCCGAGGGTGCAAGAAC
CCGCGGATGAAGCAGCACTCGAAACGCAGTCAAACTGGGCTGTACGCCGG
CAAGGACATCAGGCAAGTACTCTTAGCAACCCGCAATAGACCTTTACGAG
CTCGCGCACTTGCTGGACTTTAGGATGAGGTGTAGCAGGGGGGTACGATT
TATGAAAGCTCAGCCCAACGGGGGTAGCCTTGTCGCTGACATGGTGGCTG
AGAAGATTATTGACCTGACCCACGAACACAGCAAATACTGACTTCAGAGA
CGTGCAACGGAAATCCAACTATTTATTTTATTGTGTGAAGTTGAAGAAAG
TGGATCATGGGTGAATCTCTCTCCGTTGGGGGCAAGACCTCTCCAGTTTG
GATTTTCTCGGGTACCCCTTAATCAACACCCTGCGGCCCCCAACCCCTCC
CGGCTTGAAACCTCAGGTTCGGGAACACAATCTCCTTCTCAAACAAGAAA
AGCAGACGAACTTGGAAGCCCAACGTGCAGCTGAAGCGTTTATGGAGCGA
AACCTTAGAAAAGTGCGCTGGGAGTAAGGAGTAGGGGGGGTGATCGGGTC
TGTGCTTGATTGGGATATCGCAAGATTGGTTCCTGTAATAATCCCTGCTT
GCAATCTCACCAGATAGCTCGCATGTCATACCGCAATGTTTTCCACTGCG
CTGCAGATCACATGCATGAATATGCATTGTCCTTGTTAGCGAGGGAAATA
TGGAAAGGTGTAGTCACCAGTATATCGCATGAATTCATTTTCACACGAAA
CGGTCACCCACAAAATGTTTTTTGGGATAGGGTCAAGGTTTGTTCCTCCC
CTTTTCATAGCAGATACTCTGCTGTACGAGTACAGGAACCATCACTTCCA
CTTCAAGACGCGTTTTCCCCCTTTGTTGAGTTTTGCAATGACCATGGTCC
TCAATTTCATATGTAGCAAGTCCTCGAAATCTAAAGATGGTTTTGCCAAG
CTAATCTGGTGTTGTACATCACCAAACATGCCCCTTCTGGTGACCCTGTG
CGTTGCCCACACCCGTCCCTGCTCATCTCAGGTGGATAAGGTTTCATGTG
ACCACTCACGCTCTCCGATGTGTTGAAAATGCTGGTGGCATTGATAGGTG
AGCTGCCTGTGATCAGAGAACGTCTACTGTACAGGACACTTCAATGTGTA
GCCCTAACCCTAACTCTTATAGCCTTGCGCTTGGCTATGATGAGAAAATA
GAATAGGAGCAGCATACCATGCTGCTCATCGGAAACAACTCTCTGAAATA
TGGAAGCGTGATCCTGTTTAAAGGTATGAACTGGCATATATATCTATCTC
TTTGTCTCGAAGTTAGCACAGCAATGGTAGTGCACGTTCCCCAGAGTCAA
AAACCACGGAGCCTGCAGCCCAGGCCTCTGTGCTGACACATGTTACCCAC
CCCCCCTTCACAGCCCCATTATGAGTTCCATCCCTTAATTCTACAAATTT
TGCTGAGCGTTGTTTGTTGGCACCCACATGAAAGTATGAAGTACAAAAGC
GGCCCAGTACGTAAGTAGGCAGTCCAGTAGGTAAGTAGACAGTCCACAAC
AACATTCTTCACCTACATTTATGGGTCATGGATGTTGAACCAGTACGTCC
TTGGTCCACGGCACAGCACAATTAACTACTGTACAGCACACTCCGTTCTG
CAGAAGTGTTCACTCCCCCTCAATTGCCACCCCCCTCAATTGCCCTAACC
CTTGCCACCCCCCTCAGGTACCTGCTCAAGATGCCCGACAGGTGGCTCAA
CTCGGTGGAAGGAACAAGGGCAAAGAGGGAGATTGAGGCTGCCATAGCCG
GTGGGAAACCCAACCCCCTCGCCAGAGCCATGGCCATTGCACAAGGGAGC
AGATTGGAAGGGGGGGAGAAACTGAGGGATGGGGTCAAGGAAGGCGGACC
TGCTCAGGGCGGCGAACAGCCGGAGCAAAGCCCGCGGCAATGACCACGTT
TCACTGGTACTCCACGAGTGATGTTTCGATTTTTTCTCTCCGGCGTTTCA
GTGTATCTGTGCGGTACTTTGAAGCAGTTAGAGCGTGCTTTCAGCTGTTG
GCGAATTCGATGCTTCAAGGTACACTCCAGAGCTCTGCACTAGTCACCAA
GAGCCATTCCGAGGTGAAGGAATTAATGGTTTTTCGTTCTAGTATGGAGT
GCTTTGCTTGAAGTAGTAATGACATGGATGGGGAGCAATGACGTCTTTGT
CTGTGGGGTGAGGGGCAGAGCCAGCTAGAGGAAGGGCACATGGGAAGGAA
TAATTGCCCCCATTGTGCAAGGGTCAGGCCCTAACCCGCCCGTCACCACC
ACATGCATGCAAATTATCCATTTTCAGTCTTGTGTCGAATGAGTTGTCCC
CCCTCCCTTGTGAGCTTCATCCTTCCTGCCTCCCTCAAAGGGTGTGGGCA
TGTTCAAGCCTCCCTCCATTGTTCAAGCCTCCCTTCATTGCATGCAAACC
AGGCACAACGTACTGGGATGAATACAAGGCCATTCACCATTCAGTGTCAT
ATGCAAGTTAGATGTGAGGACACACCTCCTTGGAGGGCATGCCTCCTCTT
GGCAGTTACAGCATATTTGGGAGGAGGCGTGTC
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1027:5694..8526-

>mRNA_D-mesarthrocarpus_Contig1027.3.1 ID=mRNA_D-mesarthrocarpus_Contig1027.3.1|Name=mRNA_D-mesarthrocarpus_Contig1027.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=510bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1027:5694..8526- (Discosporangium mesarthrocarpum MT17_79)
ATGTGGGCTCGGAGCTCATCGCTGGAATTCCTGCAGAATTTTGCCCGAGG
GTGCAAGAACCCGCGGATGAAGCAGCACTCGAAACGCAGTCAAACTGGGC
TGTACGCCGGCAAGGACATCAGGTTCGGGAACACAATCTCCTTCTCAAAC
AAGAAAAGCAGACGAACTTGGAAGCCCAACGTGCAGCTGAAGCGTTTATG
GAGCGAAACCTTAGAAAAGTGGATAAGGTTTCATGTGACCACTCACGCTC
TCCGATGTGTTGAAAATGCTGGTGGCATTGATAGGTACCTGCTCAAGATG
CCCGACAGGTGGCTCAACTCGGTGGAAGGAACAAGGGCAAAGAGGGAGAT
TGAGGCTGCCATAGCCGGTGGGAAACCCAACCCCCTCGCCAGAGCCATGG
CCATTGCACAAGGGAGCAGATTGGAAGGGGGGGAGAAACTGAGGGATGGG
GTCAAGGAAGGCGGACCTGCTCAGGGCGGCGAACAGCCGGAGCAAAGCCC
GCGGCAATGA
back to top