mRNA_D-mesarthrocarpus_Contig1025.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1025.7.1
Unique NamemRNA_D-mesarthrocarpus_Contig1025.7.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: D7FV92_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV92_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 5.720e-74
Identity = 122/218 (55.96%), Postives = 156/218 (71.56%), Query Frame = 3
Query:   15 VGSIRAPDLAVDAMVAWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGEVQALKTAFEEEILFIFPTLERLAKELAMRLDYNGHYS 668
            VGS    +  ++AM +W+G+ + YRLEWP+HL+L RE M  YNRLF  LA  KR   ELERVWP LMQ+ YR L   ++ WLGP+W LRA MAFFV+NL FYLQVDVVE  Y+LL+  +    DF  ++RAH  FL+TLRAKF++DN AI + + R LR VL FCCLF+LH DA D+   EV AL  AF++E+  + P LE++AKEL MRLD+NGH+S
Sbjct:  844 VGSGPRVEEMLEAMDSWSGLCLHYRLEWPMHLVLTRETMQTYNRLFRLLACVKRASLELERVWPTLMQSRYRGLANEESAWLGPLWMLRARMAFFVSNLAFYLQVDVVEAAYTLLRSKLVTVRDFVSLQRAHQEFLATLRAKFYVDNLAIAQGLGRALRHVLRFCCLFSLHGDAKDILHSEVIALHDAFQDEMKLLVPVLEKVAKELMMRLDFNGHFS 1061          
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: A0A7S2W3Z6_9STRA (Spindle pole body component n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3Z6_9STRA)

HSP 1 Score: 172 bits (437), Expect = 3.050e-45
Identity = 89/216 (41.20%), Postives = 129/216 (59.72%), Query Frame = 3
Query:   21 SIRAPDLAVDAMVAWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGEVQALKTAFEEEILFIFPTLERL-AKELAMRLDYNGHY 665
            S +A +  +DA   W  + ++Y ++WPLHLI  +E +  YN++F  L  TKR   ELE +WP LM+  YR L   D  WL P+ ++ + M FFV NL  YLQVDVVE ++S L  ++   E+F+ VRRAHN +L+ L+ K  +    + E ++R+LR    F  LF   SDA ++P  EV+A    F  E   ++  LER  AKELA RL+Y+G +
Sbjct:  414 STQAMERLLDAQATWDDLHLEYTVDWPLHLIFTQEALAAYNKVFSLLWATKRTMLELELLWPQLMETRYRVLTGPDLIWLRPLHTIHSEMLFFVKNLLVYLQVDVVEAQFSKLVSSLQLQEEFDAVRRAHNTYLAALQKKSHIAVRPLMEGIQRVLRSCRHFAALFANFSDAAEIPHSEVEAAVEQFRTEATGLYMLLERTDAKELAARLNYSGWF 629          
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: UPI0009E35A9C (LOW QUALITY PROTEIN: gamma-tubulin complex component 4-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E35A9C)

HSP 1 Score: 130 bits (327), Expect = 5.510e-30
Identity = 73/230 (31.74%), Postives = 119/230 (51.74%), Query Frame = 3
Query:   63 WTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGE---VQALKTAFEEEILFIFPTLERLAK--------ELAMRLDYNGHYSNH*QDKKSDVSVVSLLG 719
            W  V +QY ++WPLH++ +   +  YN LF FL   KR   +L+RVW A M    + L T   + +  +W  R +MAF V NL +YLQVDV+E +YS L   +++  DFE +R AH+HF++T+ A+ FL    +   +  +L L   F  L  L + +  L   E   ++ +   +E + + +F  L  +          +L +R+D+N H+S+      + VS     G
Sbjct:  445 WDCVKLQYDVQWPLHILFHPAVLEKYNNLFRFLLKVKRTQLDLQRVWAAYMGT--KHLSTAQLSNMTKIWLARMHMAFLVDNLQYYLQVDVLEAQYSQLVEKINSTRDFESIRLAHDHFITTMMAQSFLLMKPVSHCLDEILNLCQSFSSLL-LQTGSAGLTHRELTQIENITKTYERQTILLFQILSSVRSHQASPHLAQLLLRIDFNKHFSSSSSSLSTTVSSSEASG 671          
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: A0A2B4SWB2_STYPI (Gamma-tubulin complex component n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SWB2_STYPI)

HSP 1 Score: 128 bits (321), Expect = 2.440e-29
Identity = 74/223 (33.18%), Postives = 117/223 (52.47%), Query Frame = 3
Query:   36 DLAVDAMVAWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGEVQALKT---AFEEEILFIFPTLERLAK--------ELAMRLDYNGHYSN 671
            D A   +  W  V +QY ++WPLH++     +  YN+LF FL   KR   +L++VW A M    + L T   + +  +W  R +MAF V NL +YLQVDV+EV+YS L   + +  DFE +R AH++FL+TL A+ FL    +   +  +L L   F  L  L + +  L K E+  +      +E + +  F  L  +          +L +R+D+N H+S+
Sbjct:  324 DQAGVVISGWDCVKLQYDVQWPLHILFQPTVLENYNKLFRFLLKVKRTQLDLQQVWAAYMGT--KHLSTAQLSNMTKIWLSRMHMAFLVDNLQYYLQVDVLEVQYSQLVEKIKSTRDFESIRLAHDNFLTTLMAQSFLLMKPVSHCLEEILNLCQSFSSLL-LQTGSSGLAKRELSQIDNITKTYERQTVLFFQILSSVRSHQASPHLAQLLLRIDFNKHFSS 543          
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: A0A3P4NF32_GULGU (Gamma-tubulin complex component n=2 Tax=Mustelidae TaxID=9655 RepID=A0A3P4NF32_GULGU)

HSP 1 Score: 122 bits (305), Expect = 7.750e-29
Identity = 70/212 (33.02%), Postives = 109/212 (51.42%), Query Frame = 3
Query:   63 WTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGEVQA--LKTAFEEEILFIFPTLERLAK--------ELAMRLDYNGHYS 668
            W  + + Y+++WPLH++     +  YN +F +L   +RV  EL+  W   MQ    R   + N      W LR +MAF V NL +YLQVDV+E ++S L   +++  DFE +R AH+HFLS L A+ F+    +   +  +L L  GFC L + +   +D  +G  Q   L   F  +   +F  L  +          +L +RLDYN +Y+
Sbjct:   71 WAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQ----RKHLKSNQTDAVKWRLRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHGFCSLVSQNLGPLD-ERGAAQLGILVKGFSRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYYT 277          
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: A0A3M6TVE7_POCDA (Gamma-tubulin complex component n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TVE7_POCDA)

HSP 1 Score: 126 bits (317), Expect = 1.150e-28
Identity = 71/214 (33.18%), Postives = 115/214 (53.74%), Query Frame = 3
Query:   63 WTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGEVQALKT---AFEEEILFIFPTLERLAK--------ELAMRLDYNGHYSN 671
            W  V +QY ++WPLH++     +  YN+LF FL   KR   +L++VW A M    + L T   + +  +W  R +MAF V NL +YLQVDV+E +YS L   +++  DFE +R AH++FL+TL A+ FL    +   +  +L L   F  L  L + +  L K E+  +      +E + + +F  L  +          +L +R+D+N H+S+
Sbjct:  432 WDCVKLQYDVQWPLHILFQPAVLENYNKLFRFLLKVKRTQLDLQQVWAAYMGT--KHLSTAQLSNMTKIWLSRMHMAFLVDNLQYYLQVDVLEAQYSQLVEKINSTRDFESIRLAHDNFLTTLMAQSFLLMKPVSHCLDEILNLCQSFSALL-LQTGSSGLAKRELSQIDNITKTYERQTVLLFQILSSVRSHQASPHLAQLLLRIDFNKHFSS 642          
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: A0A3B4A9G3_9GOBI (Gamma-tubulin complex component n=8 Tax=Gobiidae TaxID=8220 RepID=A0A3B4A9G3_9GOBI)

HSP 1 Score: 125 bits (314), Expect = 2.620e-28
Identity = 65/210 (30.95%), Postives = 108/210 (51.43%), Query Frame = 3
Query:   63 WTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGEVQALKTAFEEEILFIFPTLERLAK--------ELAMRLDYNGHYS 668
            W  + + YR++WPLH++     +  YN +F +L   +RV  +L+ +W   MQ  + +    D     P W LR +MAF + NL +YLQVDV+E ++S L   +++  DFE +R AH+HF+S L A+ F+    +   +  +L L   FC L   +S   +    ++  L   F  +   +F  L  +          +L +RLDYN +Y+
Sbjct:  404 WAALGLSYRVQWPLHILFTPAVLEKYNVVFRYLLSVRRVQSQLQHLWALQMQRKHLKSSQTD----APQWRLRNHMAFLIDNLQYYLQVDVLESQFSQLLTQINSTRDFESIRLAHDHFISNLLAQSFILLKPVFHCLSEILELCHSFCSLVGQNSALDERGAAQLDLLIKGFRRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYYT 609          
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: A0A1S3HV12_LINUN (Gamma-tubulin complex component n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HV12_LINUN)

HSP 1 Score: 125 bits (313), Expect = 4.100e-28
Identity = 66/216 (30.56%), Postives = 114/216 (52.78%), Query Frame = 3
Query:   48 DAMVAWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFN-LHSDAVDLPKGEVQALKTAFEEEILFIFPTLERLAK--------ELAMRLDYNGHYS 668
             A   W  + ++Y +EWPLHL+    C+  YN+LF FL   KRV  +L+  W  L  N +++    +N     MW+LR +M+F V NL +YLQVDV+E ++S+L   +    DFE +R AH+ F+++L ++ FL    +   +  +L     FC L +  H+   +    +++ +   F+ +   +F  L  +          +L +R+DYN ++S
Sbjct:  435 SAEPGWNVLGLEYSVEWPLHLLTTESCLEKYNQLFSFLLLVKRVELDLQHCW-MLHMNHFKQQEMLENE--RQMWNLRMHMSFLVDNLQYYLQVDVIESQFSILLEKIHTTRDFEAIRLAHDQFITSLLSQSFLLMKGVSRCLHEILNGCHAFCVLVSHSHTGMDERQTAKLEEIAKNFQRQSKLLFSILSSVKNHQGSPHLAQLLLRMDYNKYFS 647          
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: D8QRE9_SELML (Gamma-tubulin complex component n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QRE9_SELML)

HSP 1 Score: 125 bits (313), Expect = 4.550e-28
Identity = 72/232 (31.03%), Postives = 120/232 (51.72%), Query Frame = 3
Query:   36 DLAVDAMV-AWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLG--------PMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKG-EVQALKTAFEEEILFIFPTLE--RLA--------KELAMRLDYNGHYSN 671
            D+AV      W G+ ++Y ++WPL L+ NRE +  Y+++F +L   KR+  ELE+ W   MQ   R    R              P W LR +MA+ +TNL FY+QVDV+E +++LLQ  V A++DF  + R H  +LS L ++ FLD  ++   +  +++L L  C +   H DA       E+  +   F ++   ++  L   +LA        ++  +RL+YN  + +
Sbjct:  470 DIAVGPSYDGWDGIALEYSIDWPLQLLFNREVLAKYSKVFQYLLRLKRIQLELEKSWAKAMQRDRRESRGRQKNHKKDDPKVSGMPTWRLRQHMAYLITNLQFYIQVDVIESQWNLLQERVQASKDFTELARFHQEYLSALISQSFLDIGSVSRILDSIIKLCLQLCRIME-HQDATSSSTAAELDQITEEFNKKSNSLYTILRSSKLAGSQRAPFLRQFLLRLNYNSFFES 700          
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: B3RSJ9_TRIAD (Gamma-tubulin complex component n=2 Tax=Trichoplax TaxID=10227 RepID=B3RSJ9_TRIAD)

HSP 1 Score: 124 bits (311), Expect = 7.020e-28
Identity = 70/217 (32.26%), Postives = 111/217 (51.15%), Query Frame = 3
Query:   48 DAMVAWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAV-DLPKGEVQALKTAFEEEILFIFPTLERLAK--------ELAMRLDYNGHYSN 671
            +A   WT + +QY ++WPL LIL +  +  YN LF FL    R+  EL+  W   MQ   +R   ++ T    +W+LR +MAF V NL +YLQVDV+E ++++L   + + +DFE VR AH+ F+S L  + F     +   +  +L L   FC   N  SD V +    E   +   FE +   +   L  +          +L +R+D+N  +S+
Sbjct:  428 EAECGWTCLNLQYNVQWPLQLILTKPILEKYNVLFRFLISVNRIQLELQHCWKLQMQ---KRQEWQEQTQFRNIWNLRNHMAFLVDNLQYYLQVDVLEGQFTILMDKIKSTKDFEHVRIAHDQFISALVGQSFRLLKPVSHCLDEILNLCQRFCAFVNRQSDEVLESSAEEFDEISKCFERQTSLLLKILSSVRSHQASPHLSQLLLRIDFNKFFSS 641          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV92_ECTSI5.720e-7455.96Spindle pole body component n=2 Tax=Ectocarpus Tax... [more]
A0A7S2W3Z6_9STRA3.050e-4541.20Spindle pole body component n=2 Tax=Rhizochromulin... [more]
UPI0009E35A9C5.510e-3031.74LOW QUALITY PROTEIN: gamma-tubulin complex compone... [more]
A0A2B4SWB2_STYPI2.440e-2933.18Gamma-tubulin complex component n=2 Tax=Stylophora... [more]
A0A3P4NF32_GULGU7.750e-2933.02Gamma-tubulin complex component n=2 Tax=Mustelidae... [more]
A0A3M6TVE7_POCDA1.150e-2833.18Gamma-tubulin complex component n=2 Tax=Pocillopor... [more]
A0A3B4A9G3_9GOBI2.620e-2830.95Gamma-tubulin complex component n=8 Tax=Gobiidae T... [more]
A0A1S3HV12_LINUN4.100e-2830.56Gamma-tubulin complex component n=2 Tax=Lingula un... [more]
D8QRE9_SELML4.550e-2831.03Gamma-tubulin complex component n=4 Tax=Selaginell... [more]
B3RSJ9_TRIAD7.020e-2832.26Gamma-tubulin complex component n=2 Tax=Trichoplax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1025contigD-mesarthrocarpus_Contig1025:19560..24345 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FV92
Preferred nameTUBGCP4
PFAMsSpc97_Spc98
Model size1000
Max annot lvl2759|Eukaryota
KEGG koko:K05544,ko:K14849,ko:K16571
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000278,GO:0000280,GO:0000578,GO:0000910,GO:0000923,GO:0000930,GO:0000931,GO:0003002,GO:0003006,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005911,GO:0006403,GO:0006996,GO:0007010,GO:0007017,GO:0007020,GO:0007049,GO:0007051,GO:0007052,GO:0007056,GO:0007058,GO:0007098,GO:0007112,GO:0007135,GO:0007140,GO:0007143,GO:0007147,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007350,GO:0007351,GO:0007389,GO:0008092,GO:0008150,GO:0008274,GO:0008298,GO:0008358,GO:0008595,GO:0009506,GO:0009605,GO:0009607,GO:0009624,GO:0009790,GO:0009798,GO:0009880,GO:0009948,GO:0009952,GO:0009987,GO:0009994,GO:0012505,GO:0015630,GO:0015631,GO:0016043,GO:0019953,GO:0021700,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030054,GO:0030154,GO:0030865,GO:0031023,GO:0031109,GO:0031122,GO:0031410,GO:0031982,GO:0032153,GO:0032155,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033036,GO:0033206,GO:0034622,GO:0035282,GO:0040007,GO:0043015,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043622,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044703,GO:0045450,GO:0046785,GO:0048232,GO:0048285,GO:0048468,GO:0048469,GO:0048477,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050896,GO:0051179,GO:0051225,GO:0051258,GO:0051298,GO:0051301,GO:0051321,GO:0051415,GO:0051418,GO:0051641,GO:0051704,GO:0051707,GO:0055037,GO:0055044,GO:0060810,GO:0060811,GO:0061640,GO:0061983,GO:0065003,GO:0070727,GO:0070925,GO:0071840,GO:0090306,GO:0090307,GO:0097435,GO:0097708,GO:0140013,GO:0140014,GO:1902850,GO:1903046,GO:1903047
Exons6
Evalue1.41e-75
EggNOG OGsKOG2065@1|root,KOG2065@2759|Eukaryota
EC1.3.1.89
Descriptionmicrotubule nucleation by interphase microtubule organizing center
Cds size624
COG categoryJ
BRITEko00000,ko01000,ko01009,ko03009,ko03016,ko03036,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1025.7.1prot_D-mesarthrocarpus_Contig1025.7.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1025 19883..24292 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789167.1356926-UTR-D-mesarthrocarpus_Contig1025:19559..198821680789167.1356926-UTR-D-mesarthrocarpus_Contig1025:19559..19882Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1025 19560..19882 -
1680789167.2181792-UTR-D-mesarthrocarpus_Contig1025:24292..243451680789167.2181792-UTR-D-mesarthrocarpus_Contig1025:24292..24345Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1025 24293..24345 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789167.1471019-CDS-D-mesarthrocarpus_Contig1025:19882..199511680789167.1471019-CDS-D-mesarthrocarpus_Contig1025:19882..19951Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1025 19883..19951 -
1680789167.1567643-CDS-D-mesarthrocarpus_Contig1025:20853..209911680789167.1567643-CDS-D-mesarthrocarpus_Contig1025:20853..20991Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1025 20854..20991 -
1680789167.17137-CDS-D-mesarthrocarpus_Contig1025:21771..219151680789167.17137-CDS-D-mesarthrocarpus_Contig1025:21771..21915Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1025 21772..21915 -
1680789167.1833582-CDS-D-mesarthrocarpus_Contig1025:22894..229911680789167.1833582-CDS-D-mesarthrocarpus_Contig1025:22894..22991Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1025 22895..22991 -
1680789167.1948843-CDS-D-mesarthrocarpus_Contig1025:23498..236391680789167.1948843-CDS-D-mesarthrocarpus_Contig1025:23498..23639Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1025 23499..23639 -
1680789167.204627-CDS-D-mesarthrocarpus_Contig1025:24257..242921680789167.204627-CDS-D-mesarthrocarpus_Contig1025:24257..24292Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1025 24258..24292 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1025.7.1

>prot_D-mesarthrocarpus_Contig1025.7.1 ID=prot_D-mesarthrocarpus_Contig1025.7.1|Name=mRNA_D-mesarthrocarpus_Contig1025.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=208bp
MVAWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVW
PALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYS
LLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLG
FCCLFNLHSDAVDLPKGEVQALKTAFEEEILFIFPTLERLAKELAMRLDY
NGHYSNH*
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mRNA from alignment at D-mesarthrocarpus_Contig1025:19560..24345-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1025.7.1 ID=mRNA_D-mesarthrocarpus_Contig1025.7.1|Name=mRNA_D-mesarthrocarpus_Contig1025.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4786bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1025:19560..24345- (Discosporangium mesarthrocarpum MT17_79)
ATGGGGGGAGGAACGTGGGGTCTATTCGGGCACCGGACCTGGCGGTGGAT GCTATGGTTGCATGGACAGGCGTCTTCATTCAGTACAGGTGCTTTGCAGC ATTAGGAGGGGAGAATTATTAATCAACTGGAGTGTTTTCTTTCTCCAGCA AAAATTTCTTTGAGCTCAAGCCTCCGGGGAATAGGTAGGGGAAGGACGTG CCCGGTACAGGGAAAGATGGCAATGTTGCATCTTGCATCTCCACAACCAT GATTCAGCGGGGTTTGCCTCTGCAATCAGTGAAGAGTCACCATCTGTACG TACTGTACCTTTTCCTGCCTTTTGTCTCGCAGCTGAAGGCGAAGCCTTTC GTTGACCACGTGTAAGGGGAGTTGACTATGCAGGTGCCAGTCTGTCCACC CGTAAATTCTCTTGCAATGGAGCTCTGACAACAAGCATAGGTATTTTTCG GGGTGATTTGTAGCGTAGTACAACATCGCACTGCCTGCACCATCCTCCCT GTACTGGTGGCTTCCTCCGCTACCCCCGTCCGACTTGCTTCGCTTAGCCC TGTCGCTCGCACAACAGTCATCTTGAGAGGCAGTCTCATCTTCCACAAGG CAAGACTGCTGTTTAAAACTCTAGAGTCACGATGATGCATATTCCCACTC AAATCCCCCCTCCCCCCTTCACCCCTCGCGTATCATCCCCTTCGGCACAC CGACAGGCTGGAATGGCCCCTGCACCTCATCCTCAATAGGGAGTGCATGG GAGTGTACAACCGCTTGTTTGGATTCCTGGCTCACACAAAGCGGGTGGGA TTTGAGCTGGAGAGGGTGTGGCCGGCCTTGATGCAGAATTGCTATAGGCG AGTCACTCATCAGGACTCGATTAAAACCGGGGATAAAAGATGACGAGAAG AGAGTGGTATGGCGTTGTGCATATGGCAGCTGGGGAATATGCAGAAACGA TAGTAATACAACTCACGTTTGCATCGACTGCATCGATTCTTCGGGCGGTG CCTCTCGTTCAAGGGACCCTTTTTCTGGTTGGTGAACAGTGAGCGTAGAG CCGTTTCGAAGGACGCAAGCCCTTTTTCTCTAGATAAAAAAGGGTGAAAC ACTTCAAAGGACTGTCGTTTACTATGCCGTTGCCTGTACGAAAGGAGTGA CTGTCGGAGTTTTGGGCAAGGAGTGAGCAAGTCATCTCCAACCCAAGTGT GTTGAATCATGGTCCCTCTCTCCTGTGCAATGGTAGACCAAGTGCCAATT AATTTCTGTCCCATTGTCCCTACAACACCCTGTCAATGCTTGACCAGATC CTACTACTCATTCCGCCCTTCCTCACAATTACCCGAATCAATTAATCTAA CCAGACGTCTCCCAACAAGGGACAATACTTGGCTTGGTCCCATGTGGAGC CTCAGAGCCAACATGGCGTTCTTTGTCACCAACCTTACCTTCTACCTCCA GGTACCGTGTGGAGTTGTAGGGGGGGGGGGGTCTTTCGTGTGTTGTCTTC CTTCGCTAAGAAGGTGGGTTTTCTGGGAGAGAACTATGTAGGAGCAGACA GGGGTGGGCTCAGCTCAGTGTTGACGTTAGTGCGAGCGAGGCTTTGTCTC CGGGATTTTTCTTCCCGTAGTAAGCCCTCGCTGTTCTTGAAACTTAAGCT CTATGCTTATGAGTCAGGGTTTGGGTTTGGGTTTGATTTGCGTTGTTGGT TGTCGGTTAGTGGTGCTTATCACTGGCGGGGTGGGGTTGACATGATTCCA TTTTCTATGGGAGCTTTTCGGCTGTATGTTCGTGAACGTGATGGTGCTGC AGCGGCTTGCGGATCTACAACGGAATGACTGTAAAAAAATTGGTTAGCCC GAGCCAACAATAGGTGGTAAATTCAAAGATTCTGCCTTGTCTCAAGGTAC CAAGTACCTCAAAGTGTTGGTTGCCACACCACAGTATTACAATGGCCCAG TGAACAGTCATGGTACACAGTGACATAGAAAATTAGGCTCATATGGTAGC TGGCAGGGATATACCCTTTTTGCGGTATTACCTCTCTTTACCTTTGACCA ATCCGTTCTTAACACACTCGATGGGGTGGTGTTATGTTTAATACTCTGAA GAGTCTCAGGGTACAGTGGGTCCGTGCTTGACTGGTATGGATACTCCTTG TTTGCTCTATCACAGCTTCGTGATTCCCAGCTATCCTTTGCAAGACACCG CCCCTAACTCGGAATTGCAGCTCGTATCTTTTTCTGCTTGCTTTGGGGTG CGGAGGGAGGTCAATGCGGAAGTGGGAGTGCTTGTGTGACACAAGGATTG TTTTACTCTGAACTGCAACACGCCTAGGCTACAGCAGGTATTACTGGATT CATGTCGTGGTTGAGATATAATGAAAGGCGACCTACTAGGATGTGCTTGC TGTTCTCCTCTCCTCTTGTGCTGTGGAAAGGTGGATGTGGTGGAGGTCGA ATATTCCCTCCTACAGAGGACTGTGTCTGCTGCAGAGGACTTTGAGGGGG TGCGCAGGGCACACAACCACTTCCTATCCACCCTCCGCGCCAAGTTCTTT CTCGACAACTTTGCCATCAAGGAGGTGAAGAGCACCGGCGTGATCCCTCA GACTGCTGTACTTGTTTTTTTTTGCTTGGCACGATCCTGATTCGGGGGTG GGAACCGGCAGTAGAATCGGTGATTCAGGGGAGCAGGGCTCCACGCCATG TTGGTAAGGTCCACCTCTGTTACACAGCAGGGTTTGATCTTTTCGTTCAT GGGACCAGTAACGGTCCCTCCTATCTACTCGATGGAGCGATTGACGGGCT GTTGAGAGCGGAACTGTTATGTTGTTCTTACTCCCATGTTTATTCCAGTG TGTGACGTGTGCCCAATGGTTATGCCTTCCTTGAATGTGCAAGGTTTTCT TTGGGTCACATGCACATGTGAATACGTTATAAATGAGACCTGCAATTGAT GATGAGGCGACACATACTTGGCCGAATTGCGTCTCGCCCATCACACTGCC CCATGGTGCTGGAGCATTTTGTCGTGAGGATATTGAACGGCAGTTGTCTA GGTTGAGACTGTCCCTTGGCAGTGCACTACCAGCAGCTAAAGATCGTCCA TCTCATACCAAAGACGCCAATAATATGCGCACTACATTGCTTTTGCTCCT TGAAGTGTTTTCACAGTCATCGGAGGGATGTTAAACATCACTTCCTCCAG CCGGTGATTCCATGACATTTCCAGCGGAGCTTGGTGGTGCTGATTGTGTT CTCACTTGCCGTGCCATGTTTGCTAACAAGTTCCATATTTTCATGCAACT TACCCCTTTCCTGCTACGGACGGACAACCCCAATCTCTTCCAATGATAAT ACAGAGCATGCGCCGACTCCTTCGACTGGTGCTGGGTTTCTGTTGCCTCT TCAATTTGCACAGTGATGCGGTGGATTTACCCAAGGGAGAGGTGCAGGCG CTGAAAACTGCCTTCGAGGAGGAGATCCTGTTCATATTCCCGGTGCGCGG GGCCACATGTCATCAAGCACTCTCTTTTGTTAGGTTCGCCAAAAAAATGT CTTTTGTCTGCTCGATGTTCAACTACGGTTTGAGAACACAAAAACTCTAA ATTGAGTTGGAATTTCTCACTGTGCTTCGGGAATTTTACTAAATGCGGAC CGTTTCATCTGTTTCATTTCGCTGCCGTGGCCCGATTGTGGGAATTGTCA AGATAAAGTTACCGGAGGATACATAACAGCTAATGTTTTCATATGGTATG ATAACGGTTACCATTCTTTGAGCTTTGTTTGGGGAAACTATTTTGTTGAC GGTAGTATTTCTTTCCGGACATAATTATCCATGAATTATAGGAAACATTT ATAATTCGCAAGAATACTTTGATGGCAAATAACGTTACCAGAAGACATAA AAGTACTCATGGTTCTTTTGCCTGGACATTTCCGACCATCGGGCCGCGGC AACGAAATGAAGCGGATGAAAAAGTCTGTACTTAGTGAACTTCCTGATGC TCAGTGAAAAATTCTAATCTCAGTTGACCAATTGAGAAAATTCTGTTCAT GTATTGTTACTGGTTGTTCATGAAGAAGTAGGCATTGAAGACAAGAGGGC ATGATCCACCCTTCTCCCCTGGTGACAGGAGGAATGGCAGGCCCCAAGAA TTCATGTACGTATCTCAAAGACGTAATTCCCAGTGCCGGCCCGACACCAG TACTTGCACAACTCGCTCCCTCCCCACAAACAATATCAGTTGGTCGGAGA GTGAACCAAAGGTTAGTGAATAGTCTGTTTTATCAACTCCTCTTCCCCTC CCCCCATCCTCACCTAACCCTGGCCCCTCTCCATGACATGTGCTCCCTGA ATATCTTGTTTGGTCGTCCCGGTCCCCTGCTTTCCCTGCACCAGACCTTG GAGAGGCTAGCAAAGGAGCTTGCAATGCGCCTGGACTACAATGGGCATTA CTCCAACCACTGACAGGACAAGAAGTCAGATGTTTCCGTTGTGTCATTGT TGGGATCTTTTTCTTCTTCTGCGTAACATTGTAGGGGTGATTCCTGAGCC AATCGTCGTGGCTGGGTGGGCAGGATGAGGACGCATCGCATCTTTGGCTT GTGCCGGTAGGCAGCACCCACCACGCTGGGTGATGGGTACACAACCAAGA TGACAAGCGATAACAAGGGGACTTAGTTTGAAGAATGGGTAGGAATGCAT GCTGGATAAAAAAAGAACATTTCAAGGCTGGTCGCCTTCAAGAGGCGCTG AAAAAAAATTAAATAATAAAAATGAGAATGCATACA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1025:19560..24345-

>mRNA_D-mesarthrocarpus_Contig1025.7.1 ID=mRNA_D-mesarthrocarpus_Contig1025.7.1|Name=mRNA_D-mesarthrocarpus_Contig1025.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=624bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1025:19560..24345- (Discosporangium mesarthrocarpum MT17_79)
ATGGTTGCATGGACAGGCGTCTTCATTCAGTACAGGCTGGAATGGCCCCT
GCACCTCATCCTCAATAGGGAGTGCATGGGAGTGTACAACCGCTTGTTTG
GATTCCTGGCTCACACAAAGCGGGTGGGATTTGAGCTGGAGAGGGTGTGG
CCGGCCTTGATGCAGAATTGCTATAGACGTCTCCCAACAAGGGACAATAC
TTGGCTTGGTCCCATGTGGAGCCTCAGAGCCAACATGGCGTTCTTTGTCA
CCAACCTTACCTTCTACCTCCAGGTGGATGTGGTGGAGGTCGAATATTCC
CTCCTACAGAGGACTGTGTCTGCTGCAGAGGACTTTGAGGGGGTGCGCAG
GGCACACAACCACTTCCTATCCACCCTCCGCGCCAAGTTCTTTCTCGACA
ACTTTGCCATCAAGGAGAGCATGCGCCGACTCCTTCGACTGGTGCTGGGT
TTCTGTTGCCTCTTCAATTTGCACAGTGATGCGGTGGATTTACCCAAGGG
AGAGGTGCAGGCGCTGAAAACTGCCTTCGAGGAGGAGATCCTGTTCATAT
TCCCGACCTTGGAGAGGCTAGCAAAGGAGCTTGCAATGCGCCTGGACTAC
AATGGGCATTACTCCAACCACTGA
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