mRNA_D-mesarthrocarpus_Contig10241.3.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10241.3.2
Unique NamemRNA_D-mesarthrocarpus_Contig10241.3.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10241.3.2 vs. uniprot
Match: A0A848W3C4_9PROT (ABC transporter permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W3C4_9PROT)

HSP 1 Score: 296 bits (757), Expect = 1.420e-97
Identity = 156/265 (58.87%), Postives = 196/265 (73.96%), Query Frame = 1
Query:   16 LIMFSSDTRIGRIAQVCLSLFIGLTIWEIAGWQFNAAHMAPVFGSDFALEEHPGTIPRLIEF-IQEGEFFIALGQSLALFGTGFGIALLIGLPLGILMARLRLMRIGLESYILGLYATPMAALIPFILAIFGFQFWPKVIVVVLFSVFPILYNTLEGARSLKPEMLEVARAFRSSERRIWIDILIPYTLPFALTGIRQAIGRALVGMVAAEIFLNNTGLGGWLVDSSRSFDMAGVLGAIIVTTLIGVFLMSIVRRLEKRFAGWRG 807
            L + +SD    R   + LSL  G  +WE AGW  N A MAP+ G      +HPGTIPRL ++ + + E+ ++L QS+ LF TGF +AL+  +PLGI+MAR   +RI LESYIL LY TPM ALIPFI++IFGF FWPKV+VV LF+ FPILYNTLEGARS+KPEMLEVA++FRSSE  IW DILIPYTLP+ALTG+RQA GRALVGMVAAE  L+ +GLG  L+ +SR+FDMAGVL  I+V T +G+  M   +  E+++A WRG
Sbjct:    5 LALINSDRWAVRWGTIVLSLLAGGLLWESAGWSSNQAIMAPLIGGG----DHPGTIPRLYKYLVHDEEYRLSLLQSVGLFTTGFSLALVAAIPLGIVMARFVTLRIALESYILVLYVTPMIALIPFIMSIFGFDFWPKVLVVYLFAFFPILYNTLEGARSVKPEMLEVAKSFRSSEIAIWRDILIPYTLPYALTGVRQAAGRALVGMVAAEFLLSTSGLGEELITASRNFDMAGVLATILVITCLGITFMRTAQAFEQKYAAWRG 265          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.3.2 vs. uniprot
Match: A0A1Z9JE66_9PROT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TMED167 TaxID=1986863 RepID=A0A1Z9JE66_9PROT)

HSP 1 Score: 295 bits (755), Expect = 2.850e-97
Identity = 156/265 (58.87%), Postives = 199/265 (75.09%), Query Frame = 1
Query:   16 LIMFSSDTRIGRIAQVCLSLFIGLTIWEIAGWQFNAAHMAPVFGSDFALEEHPGTIPRLIEFI-QEGEFFIALGQSLALFGTGFGIALLIGLPLGILMARLRLMRIGLESYILGLYATPMAALIPFILAIFGFQFWPKVIVVVLFSVFPILYNTLEGARSLKPEMLEVARAFRSSERRIWIDILIPYTLPFALTGIRQAIGRALVGMVAAEIFLNNTGLGGWLVDSSRSFDMAGVLGAIIVTTLIGVFLMSIVRRLEKRFAGWRG 807
            L + +SD +      V  SL +G  IWE+ G  FN A MAP+ G+D    +HPGT+PRL E++  + E+F +L QS+ LF TGF +A+L  +P GI+MARL  +R+ LESYIL LY TPM ALIPFIL++ GF FWPKV+VV LF+ FPILYNTLEGARS+KPE++EVAR+FRSSE  IW DILIPYTLP+ALTGIRQA GRALVGMVAAE FL+ +GLG  L+ +SR+FDMAGVL +I+V T +G+  M   + +E+R+  WRG
Sbjct:    5 LTLVNSDKKPVIWVTVMASLVLGALIWELVGLSFNQAIMAPLLGAD----QHPGTLPRLYEYLFHDEEYFGSLIQSIQLFSTGFMLAVLGAVPFGIVMARLVTLRVALESYILMLYVTPMIALIPFILSVLGFDFWPKVLVVYLFAFFPILYNTLEGARSVKPELIEVARSFRSSEVAIWRDILIPYTLPYALTGIRQAAGRALVGMVAAEFFLSTSGLGEELITASRNFDMAGVLASILVITGLGITFMRFAQAVERRYGAWRG 265          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.3.2 vs. uniprot
Match: A0A0S8CB12_9PROT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8CB12_9PROT)

HSP 1 Score: 272 bits (695), Expect = 4.990e-88
Identity = 149/269 (55.39%), Postives = 192/269 (71.38%), Query Frame = 1
Query:    1 VQEIALIMFSSDTRIGRIAQVCLSLFIGLTIWEIAGWQFNAAHMAPVFGSDFALEEHPGTIPRLIEFIQEGEFFIALGQSLALFGTGFGIALLIGLPLGILMARLRLMRIGLESYILGLYATPMAALIPFILAIFGFQFWPKVIVVVLFSVFPILYNTLEGARSLKPEMLEVARAFRSSERRIWIDILIPYTLPFALTGIRQAIGRALVGMVAAEIFLNNTGLGGWLVDSSRSFDMAGVLGAIIVTTLIGVFLMSIVRRLEKRFAGWRG 807
            V+ + + + +SD R  R      S+ +G  IWE AG   N   MAP+ G      + PG    LI FI +G+F  A   S+ LF TGF +AL+I +PLGI++ARL L+R+ LESYIL LY TPM ALIPF+L+I GF FWPKV+VVVLF+ FPILYNTLEGARS+K E+LEVA +FR+SE  IW DILIPYTLPFALTGIRQA GRALVGM+AAE FL+ +GLG  ++ +SR+ DMA +L AI++   +GV LM   + LE++++ WRG
Sbjct:   11 VKALVIKLINSDARWIRWLTFAASILLGAAIWEFAGRNANPVFMAPLIGD----ADTPGAARSLIGFIGDGQFRDAFLSSIKLFATGFLLALVIAVPLGIVLARLVLLRVALESYILMLYVTPMVALIPFVLSILGFGFWPKVLVVVLFAFFPILYNTLEGARSVKHELLEVAGSFRASEWSIWRDILIPYTLPFALTGIRQATGRALVGMIAAEFFLSTSGLGEVIMIASRTPDMANMLAAILLIAGLGVILMRGAQALEQKYSAWRG 275          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.3.2 vs. uniprot
Match: A0A346A005_9HYPH (ABC transporter permease n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A005_9HYPH)

HSP 1 Score: 256 bits (653), Expect = 4.760e-82
Identity = 132/246 (53.66%), Postives = 181/246 (73.58%), Query Frame = 1
Query:   67 LSLFIGLTIWEIAGWQFNAAHMAPVFGSDFALEEHPGTIPRLIEFIQEGEFFIALGQSLALFGTGFGIALLIGLPLGILMARLRLMRIGLESYILGLYATPMAALIPFILAIFGFQFWPKVIVVVLFSVFPILYNTLEGARSLKPEMLEVARAFRSSERRIWIDILIPYTLPFALTGIRQAIGRALVGMVAAEIFLNNTGLGGWLVDSSRSFDMAGVLGAIIVTTLIGVFLMSIVRRLEKRFAGWR 804
            +S+ IG+ IWEIAG   + A M P             TI  L + I+ GEF   L +S  LF TGF +AL +G+PLG+L+AR+R +RIG+E YI+ LYATPM ALIPFIL++ GF F PKV+VV LF+VFP+LYNT+EGARS+KPE++EVA++FRSSE  +W ++++PYTLP+ +TG+RQ+IGRALVGM+AAE FL++TGLG  ++ +S++FD  GV  +I V  LIGV LM +  ++E+ F  WR
Sbjct:   14 ISILIGIAIWEIAGRSTSQAFMVPF----------SETIVTLWQLIKSGEFGRQLLESAKLFVTGFVLALAVGMPLGLLLARVRFLRIGVEPYIMALYATPMVALIPFILSLMGFGFAPKVLVVFLFAVFPVLYNTVEGARSIKPELIEVAKSFRSSEWALWREVMLPYTLPYTMTGVRQSIGRALVGMIAAEFFLSSTGLGQLIMTASQNFDTGGVFASIFVIGLIGVGLMRLGLKIEQHFVRWR 249          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.3.2 vs. uniprot
Match: A0A534W3N1_9DELT (ABC transporter permease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534W3N1_9DELT)

HSP 1 Score: 255 bits (652), Expect = 7.690e-82
Identity = 136/262 (51.91%), Postives = 181/262 (69.08%), Query Frame = 1
Query:   22 MFSSDTRIGRIAQVCLSLFIGLTIWEIAGWQFNAAHMAPVFGSDFALEEHPGTIPRLIEFIQEGEFFIALGQSLALFGTGFGIALLIGLPLGILMARLRLMRIGLESYILGLYATPMAALIPFILAIFGFQFWPKVIVVVLFSVFPILYNTLEGARSLKPEMLEVARAFRSSERRIWIDILIPYTLPFALTGIRQAIGRALVGMVAAEIFLNNTGLGGWLVDSSRSFDMAGVLGAIIVTTLIGVFLMSIVRRLEKRFAGWRG 807
            M + +TR  R A    S+  G  +WE+AG + N A  AP             T+ RL E I+ GE   +LG SLALF TGFGIAL   LP G+L++R+R++R+ L  YIL + A PM ALIPFIL+IFG +F  KV+VV LF  FPILYNT+EGA S++PE++EVAR++RS E  IW D+++P T P+A+TG+RQAIGR LVG+VAAE FL+ +G+G  L+ S R+FD AG+L  ++V TL+GV LM++ R LE RF  WRG
Sbjct:    1 MLNPETRTARWATYAASVLGGAALWELAGRRANPAVAAPF----------SATLQRLWEMIETGELRASLGGSLALFATGFGIALFTALPFGLLLSRMRVLRVALSDYILLVNAMPMVALIPFILSIFGLEFGAKVLVVFLFCFFPILYNTIEGADSVRPELIEVARSYRSGEWAIWRDVMLPGTFPYAMTGVRQAIGRGLVGVVAAEFFLSASGIGQLLMTSGRNFDTAGLLATVLVITLLGVALMALGRALEDRFTAWRG 252          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.3.2 vs. uniprot
Match: A0A1F4CQ91_9PROT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CQ91_9PROT)

HSP 1 Score: 241 bits (614), Expect = 4.220e-76
Identity = 135/256 (52.73%), Postives = 172/256 (67.19%), Query Frame = 1
Query:   40 RIGRIAQVCLSLFIGLTIWEIAGWQFNAAHMAPVFGSDFALEEHPGTIPRLIEFIQEGEFFIALGQSLALFGTGFGIALLIGLPLGILMARLRLMRIGLESYILGLYATPMAALIPFILAIFGFQFWPKVIVVVLFSVFPILYNTLEGARSLKPEMLEVARAFRSSERRIWIDILIPYTLPFALTGIRQAIGRALVGMVAAEIFLNNTGLGGWLVDSSRSFDMAGVLGAIIVTTLIGVFLMSIVRRLEKRFAGWRG 807
            R  R   V +SL  G   WEIA      A  AP       L E   T+  L E  + G        S  L+ +G  +A+  G P G+L+AR+R +R+ LE+YI+ LYATPM ALIPFIL++ GF F PKV+VV LF+VFPILYNT+EGARS++PE++EVA AFRSSE ++W D++IPYTLPFA+TGIRQAI R LVGMVAAE FL+ +GLG  ++  S++FD AG+L AI+V  L+GV  M   R LE RFA WRG
Sbjct:    6 RWSRHVPVVVSLLAGAAAWEIAAHFTTRAFWAP-------LSE---TLESLAESARSGVLTRQAASSFQLYLSGLALAIFAGAPFGLLLARVRWLRVALENYIMMLYATPMVALIPFILSMMGFGFAPKVLVVFLFAVFPILYNTVEGARSIRPELIEVAHAFRSSEWQLWRDVMIPYTLPFAMTGIRQAIARGLVGMVAAEFFLSPSGLGQMIMMGSQNFDTAGLLAAILVIVLLGVGFMDFGRYLEGRFASWRG 251          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.3.2 vs. uniprot
Match: A0A1F4A431_9PROT (ABC transmembrane type-1 domain-containing protein n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4A431_9PROT)

HSP 1 Score: 239 bits (610), Expect = 1.650e-75
Identity = 128/251 (51.00%), Postives = 171/251 (68.13%), Query Frame = 1
Query:   55 AQVCLSLFIGLTIWEIAGWQFNAAHMAPVFGSDFALEEHPGTIPRLIEFIQEGEFFIALGQSLALFGTGFGIALLIGLPLGILMARLRLMRIGLESYILGLYATPMAALIPFILAIFGFQFWPKVIVVVLFSVFPILYNTLEGARSLKPEMLEVARAFRSSERRIWIDILIPYTLPFALTGIRQAIGRALVGMVAAEIFLNNTGLGGWLVDSSRSFDMAGVLGAIIVTTLIGVFLMSIVRRLEKRFAGWRG 807
            A +  SL +G   WE+AG   + A  AP+            T+  L E +  G        S  L+ TG  +A+++G P G+L+AR+  +R+ LE YI+ LYATPM ALIPFIL++ GF F PKV+VV LF+VFP+LYNT+EGARS++PE++EVA +FRS E  +W D++IPYTLPFA+TGIRQAI R LVGMVAAE FL+ +GLG  ++  S++FD A +L AI++  L+GV LM I   LEKRFA WRG
Sbjct:   10 ATMFASLALGAAAWELAGHLTSDAFWAPL----------STTLKSLGEVVHNGVLLRQAASSFELYLTGLALAVVVGAPFGVLLARITWLRVALEDYIMMLYATPMVALIPFILSMMGFGFAPKVLVVFLFAVFPVLYNTVEGARSVRPELIEVAHSFRSGEWALWRDVMIPYTLPFAMTGIRQAIARGLVGMVAAEFFLSPSGLGQMIMMGSQNFDTASMLAAILIMVLLGVGLMDIGLYLEKRFAAWRG 250          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.3.2 vs. uniprot
Match: A0A1F4AD64_9PROT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4AD64_9PROT)

HSP 1 Score: 237 bits (604), Expect = 1.370e-74
Identity = 123/249 (49.40%), Postives = 170/249 (68.27%), Query Frame = 1
Query:   61 VCLSLFIGLTIWEIAGWQFNAAHMAPVFGSDFALEEHPGTIPRLIEFIQEGEFFIALGQSLALFGTGFGIALLIGLPLGILMARLRLMRIGLESYILGLYATPMAALIPFILAIFGFQFWPKVIVVVLFSVFPILYNTLEGARSLKPEMLEVARAFRSSERRIWIDILIPYTLPFALTGIRQAIGRALVGMVAAEIFLNNTGLGGWLVDSSRSFDMAGVLGAIIVTTLIGVFLMSIVRRLEKRFAGWRG 807
            +  SL +G   WE+AG   + A  AP+            T+  L +  +EG        S  L+ +G  +A+ +G PLG+L+AR+  +R  L+ YI+ LYATPM AL+PFIL+I GF F PKV+VV LF+VFP++YNT+EGARS++PE++EVA AFRS E ++W D++IPYTLPF +TGIRQAI R LVGM+ AE FL+ +GLG  ++  S++FD AG+L AI+V  ++GV LM + R LE RFA WRG
Sbjct:   13 IAASLALGALAWEVAGHSTSGAFWAPL----------SATLKNLWDITREGVLLRQCASSFQLYVSGLMLAIAVGAPLGVLLARVAWLRTALDPYIMMLYATPMVALVPFILSIMGFGFAPKVLVVFLFAVFPVIYNTVEGARSVRPELIEVAHAFRSREWQLWRDVMIPYTLPFTMTGIRQAIARGLVGMIVAEFFLSPSGLGQMIMMGSQNFDTAGMLSAILVIVVVGVGLMDLGRLLENRFAVWRG 251          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.3.2 vs. uniprot
Match: UPI001407597C (ABC transporter permease n=1 Tax=Phytoactinopolyspora limicola TaxID=2715536 RepID=UPI001407597C)

HSP 1 Score: 236 bits (603), Expect = 3.350e-74
Identity = 130/246 (52.85%), Postives = 167/246 (67.89%), Query Frame = 1
Query:   70 SLFIGLTIWEIAGWQFNAAHMAPVFGSDFALEEHPGTIPRLIEFIQEGEFFIALGQSLALFGTGFGIALLIGLPLGILMARLRLMRIGLESYILGLYATPMAALIPFILAIFGFQFWPKVIVVVLFSVFPILYNTLEGARSLKPEMLEVARAFRSSERRIWIDILIPYTLPFALTGIRQAIGRALVGMVAAEIFLNNTGLGGWLVDSSRSFDMAGVLGAIIVTTLIGVFLMSIVRRLEKRFAGWRG 807
            SL  G  IWE+AG   +     PVF   F       T+ RL E +  GE   AL  S  +FG G  IA+L+GLP G+L+AR+R +R+GLE +I GLYA PM ALIPFILAIFGF F PKVIVV LF+VFP++    EGA S+    +EVAR+FR+ ER +W D++IPYT+PFA+TGIR AI RALVGM+AAE FL  +GLG  ++ +SR FD A V   I+V  ++GV L+++   LE+RFA WRG
Sbjct:   34 SLLAGAAIWELAGHLID-----PVFLVPFT-----DTVRRLGELVASGELPTALLASAQVFGAGLIIAVLVGLPAGLLLARVRFLRVGLEDWITGLYAMPMVALIPFILAIFGFGFTPKVIVVFLFAVFPVIITVYEGASSIPARHIEVARSFRARERHLWRDVVIPYTIPFAMTGIRLAIARALVGMIAAEFFLAVSGLGELILITSRRFDTAAVFATILVVCILGVLLLALGHALERRFAAWRG 269          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.3.2 vs. uniprot
Match: A0A534PKM1_9DELT (ABC transporter permease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534PKM1_9DELT)

HSP 1 Score: 234 bits (598), Expect = 1.150e-73
Identity = 131/262 (50.00%), Postives = 170/262 (64.89%), Query Frame = 1
Query:   22 MFSSDTRIGRIAQVCLSLFIGLTIWEIAGWQFNAAHMAPVFGSDFALEEHPGTIPRLIEFIQEGEFFIALGQSLALFGTGFGIALLIGLPLGILMARLRLMRIGLESYILGLYATPMAALIPFILAIFGFQFWPKVIVVVLFSVFPILYNTLEGARSLKPEMLEVARAFRSSERRIWIDILIPYTLPFALTGIRQAIGRALVGMVAAEIFLNNTGLGGWLVDSSRSFDMAGVLGAIIVTTLIGVFLMSIVRRLEKRFAGWRG 807
            M  SD R  R A   LS   G  +WE+ G   + A  +P   S          + RL+E ++ GE    L  SLALF  G G+AL+  LP G+L+AR  L+R  +   IL LYA PM ALIPFIL++ G  F  KVIVV LF  FPILYNT+EGARS+KPE++EVARAFRSSE  IW DI++P   P+A+TG+RQAIGR LVGMVAAE FL+ +G+G  ++ S+R+FD AG+   +++  L+G  LM++ R LE RF  WRG
Sbjct:    1 MLRSDARWVRWATYALSALGGAVLWELGGRGASPAIFSPFSAS----------MERLVEMLRTGELGAGLAGSLALFFAGLGLALVTALPFGLLLARAPLVRAAVSDAILLLYAMPMVALIPFILSLMGVDFGAKVIVVFLFCFFPILYNTVEGARSIKPELIEVARAFRSSEWAIWRDIMVPGAFPYAMTGVRQAIGRGLVGMVAAEFFLSASGIGQLIMTSARNFDTAGLFATVLIIALLGSALMALGRALEDRFTLWRG 252          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10241.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A848W3C4_9PROT1.420e-9758.87ABC transporter permease n=1 Tax=Alphaproteobacter... [more]
A0A1Z9JE66_9PROT2.850e-9758.87ABC transmembrane type-1 domain-containing protein... [more]
A0A0S8CB12_9PROT4.990e-8855.39ABC transmembrane type-1 domain-containing protein... [more]
A0A346A005_9HYPH4.760e-8253.66ABC transporter permease n=1 Tax=Pseudolabrys taiw... [more]
A0A534W3N1_9DELT7.690e-8251.91ABC transporter permease n=1 Tax=Deltaproteobacter... [more]
A0A1F4CQ91_9PROT4.220e-7652.73ABC transmembrane type-1 domain-containing protein... [more]
A0A1F4A431_9PROT1.650e-7551.00ABC transmembrane type-1 domain-containing protein... [more]
A0A1F4AD64_9PROT1.370e-7449.40ABC transmembrane type-1 domain-containing protein... [more]
UPI001407597C3.350e-7452.85ABC transporter permease n=1 Tax=Phytoactinopolysp... [more]
A0A534PKM1_9DELT1.150e-7350.00ABC transporter permease n=1 Tax=Deltaproteobacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10241contigD-mesarthrocarpus_Contig10241:2113..2973 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog351607.Acel_0886
PFAMsBPD_transp_1
Model size819
Max annot lvl201174|Actinobacteria
KEGG koko:K02050
KEGG TC3.A.1.16,3.A.1.17
KEGG ModuleM00188
Hectar predicted targeting categorysignal peptide
Exons2
Evalue2.2e-71
EggNOG OGsCOG0600@1|root,COG0600@2|Bacteria,2GP2J@201174|Actinobacteria,4EW2R@85013|Frankiales
DescriptionBinding-protein-dependent transport system inner membrane component
Cds size798
COG categoryP
BRITEko00000,ko00002,ko02000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789166.6016395-UTR-D-mesarthrocarpus_Contig10241:2112..21331680789166.6016395-UTR-D-mesarthrocarpus_Contig10241:2112..2133Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10241 2113..2133 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789166.6129577-CDS-D-mesarthrocarpus_Contig10241:2133..22711680789166.6129577-CDS-D-mesarthrocarpus_Contig10241:2133..2271Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10241 2134..2271 +
1680789166.6232512-CDS-D-mesarthrocarpus_Contig10241:2313..29731680789166.6232512-CDS-D-mesarthrocarpus_Contig10241:2313..2973Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10241 2314..2973 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10241.3.2prot_D-mesarthrocarpus_Contig10241.3.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10241 2134..2973 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10241.3.2

>prot_D-mesarthrocarpus_Contig10241.3.2 ID=prot_D-mesarthrocarpus_Contig10241.3.2|Name=mRNA_D-mesarthrocarpus_Contig10241.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=266bp
MFSSDTRIGRIAQVCLSLFIGLTIWEIAGWQFNAAHMAPVFGSDFALEEH
PGTIPRLIEFIQEGEFFIALGQSLALFGTGFGIALLIGLPLGILMARLRL
MRIGLESYILGLYATPMAALIPFILAIFGFQFWPKVIVVVLFSVFPILYN
TLEGARSLKPEMLEVARAFRSSERRIWIDILIPYTLPFALTGIRQAIGRA
LVGMVAAEIFLNNTGLGGWLVDSSRSFDMAGVLGAIIVTTLIGVFLMSIV
RRLEKRFAGWRGAAS*
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mRNA from alignment at D-mesarthrocarpus_Contig10241:2113..2973+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10241.3.2 ID=mRNA_D-mesarthrocarpus_Contig10241.3.2|Name=mRNA_D-mesarthrocarpus_Contig10241.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=861bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10241:2113..2973+ (Discosporangium mesarthrocarpum MT17_79)
GTTCAAGAGATAGCCCTCATCATGTTTTCTTCCGACACCCGCATCGGCCG GATTGCCCAGGTCTGTCTCAGCCTGTTTATCGGTCTAACGATCTGGGAAA TCGCAGGTTGGCAGTTTAACGCCGCCCATATGGCCCCGGTCTTCGGATCG GACTTCGCGGTCACCAGGTGGATCGCCGAACTGGTCGCCGGTGGTGCGAA GCTGGAAGAACATCCCGGCACGATTCCGCGGCTGATCGAGTTTATCCAGG AGGGTGAGTTCTTCATTGCCCTCGGCCAGTCGCTTGCATTGTTCGGCACG GGCTTCGGCATTGCGCTCCTTATCGGTCTGCCGCTCGGCATATTGATGGC GCGGCTGCGGCTGATGCGGATCGGCCTCGAAAGCTACATTCTCGGCCTGT ATGCAACGCCTATGGCCGCGCTGATCCCGTTTATCCTGGCGATCTTCGGC TTTCAGTTCTGGCCCAAGGTCATTGTCGTCGTCCTCTTTTCGGTCTTTCC AATCCTCTACAATACGCTGGAAGGTGCACGGTCGCTCAAGCCCGAGATGC TTGAAGTCGCCAGGGCTTTCCGGTCGTCAGAGCGCCGTATCTGGATCGAT ATACTTATTCCCTACACCCTGCCGTTCGCGCTGACCGGTATCCGCCAGGC CATCGGGCGCGCCCTGGTTGGCATGGTGGCAGCAGAAATTTTCCTCAACA ATACCGGGCTCGGCGGCTGGCTTGTGGATTCGTCACGCAGTTTCGATATG GCCGGCGTGCTGGGCGCGATTATCGTCACAACGCTGATTGGGGTGTTTCT GATGAGCATTGTTCGCCGGCTGGAAAAACGTTTCGCCGGCTGGCGCGGAG CCGCTTCATGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10241:2113..2973+

>mRNA_D-mesarthrocarpus_Contig10241.3.2 ID=mRNA_D-mesarthrocarpus_Contig10241.3.2|Name=mRNA_D-mesarthrocarpus_Contig10241.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=798bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10241:2113..2973+ (Discosporangium mesarthrocarpum MT17_79)
ATGTTTTCTTCCGACACCCGCATCGGCCGGATTGCCCAGGTCTGTCTCAG
CCTGTTTATCGGTCTAACGATCTGGGAAATCGCAGGTTGGCAGTTTAACG
CCGCCCATATGGCCCCGGTCTTCGGATCGGACTTCGCGCTGGAAGAACAT
CCCGGCACGATTCCGCGGCTGATCGAGTTTATCCAGGAGGGTGAGTTCTT
CATTGCCCTCGGCCAGTCGCTTGCATTGTTCGGCACGGGCTTCGGCATTG
CGCTCCTTATCGGTCTGCCGCTCGGCATATTGATGGCGCGGCTGCGGCTG
ATGCGGATCGGCCTCGAAAGCTACATTCTCGGCCTGTATGCAACGCCTAT
GGCCGCGCTGATCCCGTTTATCCTGGCGATCTTCGGCTTTCAGTTCTGGC
CCAAGGTCATTGTCGTCGTCCTCTTTTCGGTCTTTCCAATCCTCTACAAT
ACGCTGGAAGGTGCACGGTCGCTCAAGCCCGAGATGCTTGAAGTCGCCAG
GGCTTTCCGGTCGTCAGAGCGCCGTATCTGGATCGATATACTTATTCCCT
ACACCCTGCCGTTCGCGCTGACCGGTATCCGCCAGGCCATCGGGCGCGCC
CTGGTTGGCATGGTGGCAGCAGAAATTTTCCTCAACAATACCGGGCTCGG
CGGCTGGCTTGTGGATTCGTCACGCAGTTTCGATATGGCCGGCGTGCTGG
GCGCGATTATCGTCACAACGCTGATTGGGGTGTTTCTGATGAGCATTGTT
CGCCGGCTGGAAAAACGTTTCGCCGGCTGGCGCGGAGCCGCTTCATGA
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