mRNA_D-mesarthrocarpus_Contig1022.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1022.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig1022.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1022.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1022contigD-mesarthrocarpus_Contig1022:1815..7604 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size1682
Hectar predicted targeting categoryother localisation
Exons5
Cds size1680
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789165.4272823-CDS-D-mesarthrocarpus_Contig1022:1814..21911680789165.4272823-CDS-D-mesarthrocarpus_Contig1022:1814..2191Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1022 1815..2191 +
1680789165.4376054-CDS-D-mesarthrocarpus_Contig1022:2784..30941680789165.4376054-CDS-D-mesarthrocarpus_Contig1022:2784..3094Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1022 2785..3094 +
1680789165.4484298-CDS-D-mesarthrocarpus_Contig1022:4098..44601680789165.4484298-CDS-D-mesarthrocarpus_Contig1022:4098..4460Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1022 4099..4460 +
1680789165.4608877-CDS-D-mesarthrocarpus_Contig1022:5992..61401680789165.4608877-CDS-D-mesarthrocarpus_Contig1022:5992..6140Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1022 5993..6140 +
1680789165.477927-CDS-D-mesarthrocarpus_Contig1022:7121..76041680789165.477927-CDS-D-mesarthrocarpus_Contig1022:7121..7604Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1022 7122..7604 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1022.1.1prot_D-mesarthrocarpus_Contig1022.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1022 1815..7604 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1022.1.1

>prot_D-mesarthrocarpus_Contig1022.1.1 ID=prot_D-mesarthrocarpus_Contig1022.1.1|Name=mRNA_D-mesarthrocarpus_Contig1022.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=560bp
TRKRADSHWGGGEDRTLQSAKKRLEAAEAEVRRLWVATGGPGQGEQWKDG
PVVSPGANPGVAGGVASGVASAAGGLGGSGVNSGAEAEALQRQLRAAEEE
GGRLRRRLAEWKESEGWVKAQAMLWRWRAVTVAASARQEPQPEEERQQFT
TAKPSPPPLGSASPVPHNPSPHNPSPHNPSPNHEAELATAQASVAKMAEA
ESAARAAATQAQAEVDSLAQELALEREHKRRSRQTAFRRVVARAARSRAV
GLQSRALGLWRRLAVERWAREAGVEAQRKTVASMVALGLEEQTLGLREQL
SGAKAEVGATRLEGRLAMLACVARRWELLEMARAIGRLRAAGEARWGKTR
VSIAEEALERLGASNRALRANALASALGAAVAQSGSRSVKRAWEAWHTKV
KAARALRAVVTSKVTRSKRHAWASWVLWATMAAAAEASKHRGVRVLTRCL
RARRHRSIAAALALLRHKAQLVGDAEAGAAKLGRVFRQYRVRALSRRLLQ
WRARALVATQAVHGKGHGTTGAVGMATAGKGALPLRLVSMIGRAADRVAL
RAKVRAFGRW
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mRNA from alignment at D-mesarthrocarpus_Contig1022:1815..7604+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1022.1.1 ID=mRNA_D-mesarthrocarpus_Contig1022.1.1|Name=mRNA_D-mesarthrocarpus_Contig1022.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=5790bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1022:1815..7604+ (Discosporangium mesarthrocarpum MT17_79)
ACCCGGAAACGGGCGGATTCCCACTGGGGGGGGGGGGAGGACAGAACATT
GCAATCGGCTAAAAAGAGACTGGAAGCAGCAGAGGCTGAGGTGAGGCGGC
TCTGGGTGGCCACGGGAGGACCGGGGCAGGGTGAACAATGGAAAGATGGC
CCTGTGGTCAGCCCTGGGGCCAACCCTGGGGTAGCTGGTGGCGTGGCTAG
TGGAGTGGCTAGCGCGGCTGGGGGCCTGGGTGGTAGTGGGGTGAACTCTG
GGGCTGAGGCAGAGGCCCTGCAGAGGCAGCTCCGGGCGGCAGAGGAAGAG
GGGGGACGACTGCGGAGGAGGCTTGCGGAGTGGAAGGAGAGTGAGGGTTG
GGTGAAGGCACAGGCCATGCTGTGGAGGTGGGTCAGGGGCAATGGGAAGT
AGCAGGGGAGAGGAAGGGGGGGGGTGGGGGGGAGAAGGGGGGGTTGGTCA
GAGGGGAGTTGCAGTAGAAGTGGGGAGGCATGAGTGTGTTGCAGCAGCAC
CGCATAGGATGCCTGCACCTGCAAACCTTATTCCTTACCCTAACCCAACC
CTGTACTCTAACCATAAGCGTTAGCGGCTGGGGAGAAGGGACCTGCATGA
CCCCTGATCTTACACCCTCTACACGTCAACCCTTGCCTCACCTTGCCATG
AAAAAAAAAGAGGCCATACCTCTACCCAATATGCCTGGGGGCGGGGGGGG
TTGGCGAAGGATATGCTTTAGGGTTAGGGTTAGGGAGCAGTCTTCCATTA
AGGACAGGTCTTCCCACATATTCAGGCCCCCCAAAGAGAGAGGGGTCTTG
TGAAAAAGGCAGGTCTTCAGGCTGAGACAGGTCTTTTCCATAACAAGAGG
TCTTTTGTTCCTCTCCAACTGGCTGCGCTCCCACCAACTGCCCCATCATC
CCCGCCCTCCCCTCCCAATGTCCAATTCCCCGTCCCCCTGCCTGGCCTCA
ATAAAAAAAAACATCCCCAGGTGGAGGGCTGTGACTGTTGCCGCTTCAGC
ACGGCAGGAACCCCAGCCAGAGGAGGAAAGACAACAATTCACCACTGCAA
AACCCTCGCCTCCACCTTTGGGCTCTGCCTCCCCTGTCCCCCATAACCCC
AGCCCCCATAACCCCAGCCCCCATAACCCCAGCCCTAACCACGAGGCTGA
GCTTGCCACAGCCCAGGCTTCTGTCGCTAAGATGGCTGAGGCAGAGTCCG
CTGCCCGAGCCGCAGCCACCCAGGCGCAGGCAGAGGTTGACTCCCTCGCC
CAGGAGCTGGCTCTGGAGCGGGAGCACAAGGTATGCCTGTGGGGGAGCAT
GCTCTCTCCCCAATAGCTGGGGGTCGTAATTTCTTCCGCTGTATGCCTTG
TTCTTGTGTATATTTCGGCCCTCGGGTGGTCGTGATGTCACTTCATTTTA
CCCCCATGGCTCTGGGCTGCAGTATACACTGTGTTTGGATAGGGTCCTGC
AGCAGCCTTGATCTGCCACAGTCATCCGACTCTACTGGGGTTAGAAATAG
GGTTAGGGTTAGGTGGTACAACTAGAAAGGAAGGCGGAAAGGATTCATCC
CCCGTCTGTAGGGCGTTGGAGCTCTACTGTGCTTGGGATAAAGTGAGCAC
CATGGTGATGGTGTCCTCTGCTGCCTTACCTCGTTTTTCTTTTTTTTTTT
GTCCCTTTTGTTCCTCTTTGTCTGCTCCAGTGGCACTTCACTCGAACTTA
AAAATAAAAGGGGATATATTCGGGGTTGGTTCACGCCACGTATTTTGTTG
TTTTTTTTTTGTCACCCATCAGACCGCTTGAGCTTGGTTCGAAAAATCCC
TAACCCTAAACCTAAAGGGGATCCGAGAGATGGTGAAGGTGTGCTCGGCA
CCCCCAGTAAGGGGCTGTGCTATGTAGTGCATGCATGGAGCTCTAAGCTT
GGCCATGACGTTTCTTTGTTCTTTTTCCATGCCCTGGTGCACAGACGGTG
CCGATGTGTGTTGTGCACTGAAACCGCTTTACCCCCTGATCACAGGGCAT
CGAGTTTCATGTACAGCCTTGCTTTCAGTCCACAAGTCTTGCTTATGTAC
AAGCCTTACTTACGTGCAAGTCTTCCTCAAGTACACCCACGGCGACATGC
AGTGCTCGCCTGTTCGATGCCCGTGTTCATTTTAGTGTTTAGAATTAAGG
TTATAGGGGTTGTAATCAGGGTTGGGGTTAGGGTTAGGGCAACTGGAAAG
TTATTCGAGCTTTTTCCCCTCTACCCCTTTCGAGCTTACCTGCTTGCACC
CTCCCCCTACTCTCTCCCACCCCCCCCTACCCAGCGGAGGTCGCGGCAAA
CAGCCTTCAGGAGGGTTGTGGCTCGGGCAGCGCGCTCCAGAGCTGTGGGC
CTACAGTCGAGGGCCCTGGGGCTGTGGCGGAGGCTTGCAGTGGAGAGGTG
GGCTCGGGAGGCCGGAGTGGAAGCCCAGAGGAAAACAGTTGCATCCATGG
TGGCCCTGGGGCTTGAGGAGCAGACCCTGGGGCTACGGGAGCAGCTCTCC
GGGGCCAAGGCTGAGGTGGGTGCCACGAGGCTGGAGGGGAGGCTGGCGAT
GCTGGCCTGCGTGGCTCGCCGGTGGGAGCTGCTGGAGATGGCCAGGGCCA
TTGGCCGTTTGAGGGCAGCAGGGGAGGCGCGTTGGGGAAAGACAAGGTGA
GGGAGCTTGGGTTATTTATTTTATCGGGTCACCTATTTTTCGTGTGGTCA
GGGATACTAGTATGGCTCTGGGCCCTTGGCTCTGGGCCCTTGGCTCTGGA
GCCTTGGACCTGGAGCTCATTGGCGCTTTCAGGGAAAGGTAGGGGGGTTG
TGAGGTCAATTAGCAAGAGCTTGTTCAATGACAAGTCATCGTTGGGTTGG
CTGTTGGGTGCATGAGTCTCATCATTCCATCCACCGTGGCAAAATAGGGG
TGTCGCTGTGGGTATGGCAGGCAAGCAAGAAAATGAAACTGCAGTCCCTG
TGAATTTTGCCCTGGGTTCCTAATATCCAGGTTTAGTTAAGGTGAGGGTT
AAGGATAGGCCTGTCACTTCAAGTACCATGTATCGTGTACTTGCATTTTT
TAATGATCTTCTCTGCTGTAAAAGGATTGTTTTGTGGTTGGGGGGTTGGT
GGAAGTACCACGGTAAAGGTAGGGGGATGGTGTGGGGGTGAGTATGTGGG
TTGGGACAACACGGGCGCATTGATTTTTCTTTTTTTTCTCCTTGCCCTGG
CCAATCAGGGAGACAAAGTGGCGAGTTTTGGACACTCCGTGCCCTTTTTA
ATTATTATTTTTGTTGTTGCTCTTCTTCTTACCATGCTACAGCTTGATCA
CCTCAAACCCATGATCGTGGGGTGAGAATAGAACGTAAAAGAAAATAAAA
GGAATTCAAGGGAAAAAACAAAATAGAGCACGAAAAATCCCTGTCAAGTC
TCCTTTTAGGTTAGGGTCCTAGTACTTGAACAAAACACCCCCATCAGATC
CAACCCGCTTGCGATGATTTGACCTGTGTCTCCTTGCACATGCTCTCCAT
CAGAAAGCGTCCCCTGCCTTTGTGTCCCCTCCTCCCCCCTCCCCTTCCCC
CTCCCCCGTCCATCTCTCCCCCACTCTGCACCCCCCTGGATCTGAACCCC
ATGCCTCCTTTCCTTTTGGCAGCCATGTTTGGTGGCAGGCAGAGTGAACT
TCCTAAATGCGCCTAAATATGCCTACATGTGCCTAAATGTGCCTAACTCA
CACTTGGTGCGCCTAAACATGCTTAAATGTGCCTAAATGCGCATGCCCTC
TTTGTCTCCCCCACCTTTCTTCCCCCCTAGACTAGACTTGCCTGGCGTTA
ATGCCCTGGTTGCTTATGTATGCCCGCTGCACATGCTATGCCTGCTATGC
CTGCTATGCTTGCCATTCATGCTGTGCTTGCGGCTCTTGCGTTCAAAGTG
AATACAATTCAGTCACTGAAACCTCACGCTCTGGTGTTTATGTCATACCC
TAACCTAACCGTAACCCTAACCCTCAATGCTGCACTGTACTGCAGTTTTC
TTGGTAAGCATGGGCGCTCTTTTTTTTTCAGCATTTTTGTTCTCTCTGTC
ACCCCCTCCTACCTTGACCTTGACCATGAGTTCAATGTGATCAACCTGTT
TGGTGACGAAACCCCTTTGCTGGGGAAATTAAAAATAAGAACAATGACAT
GTGATGCTGTTTCACTTGGCAATCTCAGGGTCAGTATCGCAGAGGAAGCC
CTGGAGCGACTGGGGGCCTCCAACAGAGCTCTTAGGGCCAATGCCCTTGC
CAGCGCCCTGGGTGCAGCAGTGGCCCAGAGTGGCTCTCGCTCAGTAAAGA
GGGCGTGGGAGGCATGGCACACCAAGGTTGTGGCACGGCTTCGCTCTTGA
TTCTTTCTTTGAGACCCCCCTCCCCCAGCATTGTCATGGTGGGCACACGT
CATGCCCCTGTTGCCAAAGCTGTCACGTGCTCCCCTCCCCTCAGGGTCAG
GGTCAAGAGTCAGGGTCAGGGTCAAGGGTCAGGGTCAGGTTTAGGGTCAG
GGTTTAGGGTTAGGGTTATGGTCTTTTCCCTTTTTTTGTTCTCGTTGTGA
TGAGCCTCCTCTTTGTCCTTGCCCCTTGGAACCCTAACCCTAACCCTAAC
ATGCCCTGTTATTCGCTGTACTCATTAGCTGATGTACACAATATATTCGC
TATTCATTCACTTGTTTATTTCCGACACAGTTTATTTTTGATCTTCTGCT
TCGCTGTGACTGCTTCAGGGCACTTCTCTCAGAGCTCTAGAGCCACAGCA
CCTTCACCACCCTCAAACCGAGATTTAACGTGTTGCCTCTGGAGCTAGGT
ATCTATCTGTCTATATTTGTGTGTCTTGTGTATATGTTGTGGGTGGGTAG
GTGGGTGCGCCTCTTCTGTGTATGTTTTTCTGAGAAAAATGAGTTATTTG
GTATGATACAACACCGTGGCTTCCCAAAACCCTAACCCTAGCCTCGATCT
GTTTTCATCCCATGGCACCTAAAGACCAGGCCCTCGCTTCTAGCACAGCC
TGGTCCCTTACACTCGCACCTCCCCCATCTCTTTCGAACCTTGCCCCCTC
CCCCCGCCCCATCCCCCGCCCCATCCCCCAACCCCATCCCACCCACCCAC
TCTCTCAACCCTAACCCTTACCCTAACCCTAACCCTAACCCTAACCCCAA
ACCACGCACCCAGTGCCCGTGCATGCAAAAATGCCCCCTCTTGTCCCTTC
AAATGCACACCTTCTTTCCCTCCTCCCCACCCTAACCCTAACCCTAACCC
TAACCCTAACCCTAACCCTACGGTGGTACACCGAACGTTTACAATAAACA
AAACAAGGTCAAGGCTGCTCGCGCCCTCAGGGCTGTCGTCACCTCTAAGG
TCACCCGCTCTAAGAGGCATGCCTGGGCCTCCTGGGTGCTCTGGGCCACC
ATGGCCGCTGCTGCAGAGGCCTCCAAGCACCGTGGGGTGCGGGTACTGAC
CCGCTGCCTCCGGGCGAGGAGGCACCGCTCCATAGCCGCCGCCCTGGCCC
TGTTGCGCCACAAGGCTCAGCTTGTGGGTGATGCAGAGGCTGGAGCGGCA
AAGCTCGGGCGGGTGTTTAGGCAGTATCGGGTGAGGGCGCTCTCCCGCCG
GCTGCTGCAATGGCGGGCTCGTGCCCTGGTGGCGACCCAGGCCGTGCATG
GCAAGGGCCATGGGACAACGGGGGCAGTAGGCATGGCTACAGCGGGAAAG
GGGGCCCTTCCTTTACGGCTTGTGTCCATGATAGGGAGGGCAGCAGACAG
GGTGGCTCTGAGAGCCAAGGTAAGGGCCTTTGGGCGCTGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1022:1815..7604+

>mRNA_D-mesarthrocarpus_Contig1022.1.1 ID=mRNA_D-mesarthrocarpus_Contig1022.1.1|Name=mRNA_D-mesarthrocarpus_Contig1022.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1680bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1022:1815..7604+ (Discosporangium mesarthrocarpum MT17_79)
ACCCGGAAACGGGCGGATTCCCACTGGGGGGGGGGGGAGGACAGAACATT
GCAATCGGCTAAAAAGAGACTGGAAGCAGCAGAGGCTGAGGTGAGGCGGC
TCTGGGTGGCCACGGGAGGACCGGGGCAGGGTGAACAATGGAAAGATGGC
CCTGTGGTCAGCCCTGGGGCCAACCCTGGGGTAGCTGGTGGCGTGGCTAG
TGGAGTGGCTAGCGCGGCTGGGGGCCTGGGTGGTAGTGGGGTGAACTCTG
GGGCTGAGGCAGAGGCCCTGCAGAGGCAGCTCCGGGCGGCAGAGGAAGAG
GGGGGACGACTGCGGAGGAGGCTTGCGGAGTGGAAGGAGAGTGAGGGTTG
GGTGAAGGCACAGGCCATGCTGTGGAGGTGGAGGGCTGTGACTGTTGCCG
CTTCAGCACGGCAGGAACCCCAGCCAGAGGAGGAAAGACAACAATTCACC
ACTGCAAAACCCTCGCCTCCACCTTTGGGCTCTGCCTCCCCTGTCCCCCA
TAACCCCAGCCCCCATAACCCCAGCCCCCATAACCCCAGCCCTAACCACG
AGGCTGAGCTTGCCACAGCCCAGGCTTCTGTCGCTAAGATGGCTGAGGCA
GAGTCCGCTGCCCGAGCCGCAGCCACCCAGGCGCAGGCAGAGGTTGACTC
CCTCGCCCAGGAGCTGGCTCTGGAGCGGGAGCACAAGCGGAGGTCGCGGC
AAACAGCCTTCAGGAGGGTTGTGGCTCGGGCAGCGCGCTCCAGAGCTGTG
GGCCTACAGTCGAGGGCCCTGGGGCTGTGGCGGAGGCTTGCAGTGGAGAG
GTGGGCTCGGGAGGCCGGAGTGGAAGCCCAGAGGAAAACAGTTGCATCCA
TGGTGGCCCTGGGGCTTGAGGAGCAGACCCTGGGGCTACGGGAGCAGCTC
TCCGGGGCCAAGGCTGAGGTGGGTGCCACGAGGCTGGAGGGGAGGCTGGC
GATGCTGGCCTGCGTGGCTCGCCGGTGGGAGCTGCTGGAGATGGCCAGGG
CCATTGGCCGTTTGAGGGCAGCAGGGGAGGCGCGTTGGGGAAAGACAAGG
GTCAGTATCGCAGAGGAAGCCCTGGAGCGACTGGGGGCCTCCAACAGAGC
TCTTAGGGCCAATGCCCTTGCCAGCGCCCTGGGTGCAGCAGTGGCCCAGA
GTGGCTCTCGCTCAGTAAAGAGGGCGTGGGAGGCATGGCACACCAAGGTC
AAGGCTGCTCGCGCCCTCAGGGCTGTCGTCACCTCTAAGGTCACCCGCTC
TAAGAGGCATGCCTGGGCCTCCTGGGTGCTCTGGGCCACCATGGCCGCTG
CTGCAGAGGCCTCCAAGCACCGTGGGGTGCGGGTACTGACCCGCTGCCTC
CGGGCGAGGAGGCACCGCTCCATAGCCGCCGCCCTGGCCCTGTTGCGCCA
CAAGGCTCAGCTTGTGGGTGATGCAGAGGCTGGAGCGGCAAAGCTCGGGC
GGGTGTTTAGGCAGTATCGGGTGAGGGCGCTCTCCCGCCGGCTGCTGCAA
TGGCGGGCTCGTGCCCTGGTGGCGACCCAGGCCGTGCATGGCAAGGGCCA
TGGGACAACGGGGGCAGTAGGCATGGCTACAGCGGGAAAGGGGGCCCTTC
CTTTACGGCTTGTGTCCATGATAGGGAGGGCAGCAGACAGGGTGGCTCTG
AGAGCCAAGGTAAGGGCCTTTGGGCGCTGG
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