mRNA_D-mesarthrocarpus_Contig10215.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10215.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig10215.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: D7G5I9_ECTSI (Zeaxanthin epoxidase, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I9_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 5.650e-54
Identity = 84/101 (83.17%), Postives = 95/101 (94.06%), Query Frame = 1 
Query:    1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPMK 303
            VEQRDLYDRPPS+TKSWAQGN VLIGDACHPMMPNLGQGGCQAMEDG++LTN+LK VT RS+IP TL+ FYRSR++RTS++QGLSRIASDLIV+ FDTPMK
Sbjct:  376 VEQRDLYDRPPSLTKSWAQGNAVLIGDACHPMMPNLGQGGCQAMEDGYILTNMLKDVTHRSQIPETLESFYRSRIIRTSVVQGLSRIASDLIVKNFDTPMK 476
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BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A835YX74_9STRA (Zeaxanthin epoxidase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX74_9STRA)

HSP 1 Score: 169 bits (427), Expect = 8.110e-48
Identity = 77/101 (76.24%), Postives = 90/101 (89.11%), Query Frame = 1 
Query:    1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPMK 303
            VEQRDLYDR PSV +SW+ G+  L+GDACHPMMPNLGQGGCQAMEDG+VLTN+LK VT RSEIPSTLQ +YR+R+ RT+I+QGLSRIASDLI+ QFDTP +
Sbjct:  359 VEQRDLYDRRPSVMRSWSDGHVTLMGDACHPMMPNLGQGGCQAMEDGYVLTNMLKEVTRRSEIPSTLQKYYRTRIARTAIVQGLSRIASDLIINQFDTPAR 459
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BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A7S3RBA5_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RBA5_9SPIT)

HSP 1 Score: 148 bits (374), Expect = 3.090e-43
Identity = 67/101 (66.34%), Postives = 79/101 (78.22%), Query Frame = 1 
Query:    1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPMK 303
            +E R LYDRPPS+TKSWA G   L+GDACHPMMPNLGQGGCQAMEDGF +   LK  T+RS++P  LQ +YRSR++R S IQGLSRIASDL++  F  P K
Sbjct:    1 IEDRSLYDRPPSLTKSWADGPVALLGDACHPMMPNLGQGGCQAMEDGFAIFERLKTATNRSQVPDMLQDYYRSRIVRASAIQGLSRIASDLLLSTFTFPWK 101
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BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A813JPE6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JPE6_POLGL)

HSP 1 Score: 145 bits (366), Expect = 1.310e-40
Identity = 68/101 (67.33%), Postives = 76/101 (75.25%), Query Frame = 1 
Query:    1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPMK 303
            VE R LYDRPPSV +SWA G   L GDACHPMMPNLGQGGCQAMED +++   LKG  SRSE+P  LQ +YRSRV R S IQGLSRIASDL++  F  P K
Sbjct:  124 VEDRSLYDRPPSVGRSWADGPVALAGDACHPMMPNLGQGGCQAMEDAYMICEKLKGCKSRSEVPDALQDYYRSRVFRASAIQGLSRIASDLLLSTFTFPWK 224
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BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A7S1FQ78_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQ78_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.130e-40
Identity = 65/99 (65.66%), Postives = 79/99 (79.80%), Query Frame = 1 
Query:    1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTP 297
            VEQRDLYDR P + +SWA+GN VL+GDA HPMMPNLGQGGCQA+ED FVLT +L    S  +I  +LQ FYR+R++R SI+Q LSR+ASDLI+  FDTP
Sbjct:   29 VEQRDLYDRSPELLRSWAKGNVVLMGDAVHPMMPNLGQGGCQAIEDAFVLTKILDETKSTDKIQDSLQEFYRTRILRVSIVQFLSRLASDLIINAFDTP 127
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BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: L1JNY8_GUITC (Zeaxanthin epoxidase, plastid-targeted n=5 Tax=Guillardia theta TaxID=55529 RepID=L1JNY8_GUITC)

HSP 1 Score: 147 bits (371), Expect = 1.080e-39
Identity = 67/101 (66.34%), Postives = 82/101 (81.19%), Query Frame = 1 
Query:    1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPMK 303
            +EQRDL+DRPPSVTKSW++G+  +IGDA HPMMPNLGQGGCQA+ED +VL+ +L  V  R +IP  L+ FY  R+ RTS+IQGLSRIASDLIV  FDTP +
Sbjct:  359 IEQRDLFDRPPSVTKSWSKGHVTMIGDAVHPMMPNLGQGGCQAIEDAYVLSEILGTVEKREDIPGALRSFYFKRLPRTSVIQGLSRIASDLIVSAFDTPFQ 459
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BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A7S0F566_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F566_9CRYP)

HSP 1 Score: 145 bits (367), Expect = 4.180e-39
Identity = 65/101 (64.36%), Postives = 82/101 (81.19%), Query Frame = 1 
Query:    1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPMK 303
            +EQRDL+DRPPS+TKSW++G+  +IGDA HPMMPNLGQGGCQA+ED +VL+ +L  V  R +IP  L+ FY  R+ RT++IQGLSRIASDLIV  FDTP +
Sbjct:  362 IEQRDLFDRPPSLTKSWSKGHVTMIGDAVHPMMPNLGQGGCQAIEDAYVLSEILGSVEKREDIPGALRSFYFKRLPRTAVIQGLSRIASDLIVSAFDTPFQ 462
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BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A7S2UZK7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZK7_9STRA)

HSP 1 Score: 142 bits (358), Expect = 6.030e-39
Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 1 
Query:    1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTP 297
            VEQRDLYDRPP + +SWA+GN VL+GDA HPMMPNLGQGGCQA+ED ++LT +L G  +  +I + LQ FYR R+ R S++Q LSR+ASDLI+  FDTP
Sbjct:  181 VEQRDLYDRPPELLRSWAKGNVVLMGDAVHPMMPNLGQGGCQAIEDAYMLTEILAGTKTTEKIENNLQTFYRKRIARVSVVQFLSRLASDLIINAFDTP 279
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BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A6U4D7Q0_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4D7Q0_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.540e-38
Identity = 63/99 (63.64%), Postives = 80/99 (80.81%), Query Frame = 1 
Query:    1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTP 297
            VEQRDLYDR P + +SW+QG+  ++GDA HPMMPNLGQGGCQA+ED FVL   L GV   +++P+ LQ +YRSR++RTS +QGLSR+ASDLI+  FDTP
Sbjct:  368 VEQRDLYDRAPELLRSWSQGSATIMGDAAHPMMPNLGQGGCQAIEDAFVLGEKLAGVEDSAQVPNVLQDYYRSRILRTSAVQGLSRLASDLIINAFDTP 466
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BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A7S0VSE2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VSE2_9CRYP)

HSP 1 Score: 144 bits (363), Expect = 1.590e-38
Identity = 65/99 (65.66%), Postives = 79/99 (79.80%), Query Frame = 1 
Query:    1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTP 297
            ++QRDL+DRPPSV +SW+ G+  +IGDA HPMMPNLGQGGCQA+ED +VL   + GVT RS+I  TL  FYR R+ RT+I QGLSR+ASDLIV  FDTP
Sbjct:  366 IDQRDLFDRPPSVLRSWSDGHVTMIGDAVHPMMPNLGQGGCQAIEDAYVLAEKMGGVTDRSQIQGTLSSFYRERLPRTAICQGLSRLASDLIVSAFDTP 464
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5I9_ECTSI5.650e-5483.17Zeaxanthin epoxidase, chloroplast n=1 Tax=Ectocarp... [more]
A0A835YX74_9STRA8.110e-4876.24Zeaxanthin epoxidase chloroplast n=1 Tax=Tribonema... [more]
A0A7S3RBA5_9SPIT3.090e-4366.34Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A813JPE6_POLGL1.310e-4067.33Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S1FQ78_9STRA3.130e-4065.66Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
L1JNY8_GUITC1.080e-3966.34Zeaxanthin epoxidase, plastid-targeted n=5 Tax=Gui... [more]
A0A7S0F566_9CRYP4.180e-3964.36Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S2UZK7_9STRA6.030e-3963.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U4D7Q0_9STRA1.540e-3863.64Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A7S0VSE2_9CRYP1.590e-3865.66Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10215contigD-mesarthrocarpus_Contig10215:610..2730 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G5I9
Preferred nameZEP2
PFAMsFAD_binding_2,FAD_binding_3
Model size303
Max annot lvl2759|Eukaryota
KEGG rclassRC01624,RC03037
KEGG koko:K09838
KEGG ReactionR06946,R06947,R10070
KEGG Pathwayko00906,ko01100,ko01110,map00906,map01100,map01110
KEGG ModuleM00372
Hectar predicted targeting categoryother localisation
Exons3
Evalue9.26e-55
EggNOG OGsCOG0654@1|root,KOG2614@2759|Eukaryota
EC1.14.15.21
DescriptionFAD binding
Cds size303
COG categoryCH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789165.03657-CDS-D-mesarthrocarpus_Contig10215:609..6451680789165.03657-CDS-D-mesarthrocarpus_Contig10215:609..645Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10215 610..645 +
1680789165.0598233-CDS-D-mesarthrocarpus_Contig10215:1609..17411680789165.0598233-CDS-D-mesarthrocarpus_Contig10215:1609..1741Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10215 1610..1741 +
1680789165.0748405-CDS-D-mesarthrocarpus_Contig10215:2595..27301680789165.0748405-CDS-D-mesarthrocarpus_Contig10215:2595..2730Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10215 2596..2730 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10215.3.1prot_D-mesarthrocarpus_Contig10215.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10215 610..2730 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10215.3.1

>prot_D-mesarthrocarpus_Contig10215.3.1 ID=prot_D-mesarthrocarpus_Contig10215.3.1|Name=mRNA_D-mesarthrocarpus_Contig10215.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=101bp
VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVL
TNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPM
K
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mRNA from alignment at D-mesarthrocarpus_Contig10215:610..2730+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10215.3.1 ID=mRNA_D-mesarthrocarpus_Contig10215.3.1|Name=mRNA_D-mesarthrocarpus_Contig10215.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2121bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10215:610..2730+ (Discosporangium mesarthrocarpum MT17_79)
GTTGAGCAGAGGGACCTCTACGACAGGCCTCCGTCGGTGCGTACAAACCC
TTTGACCAAACCCACTTCTAGGGAGTCAAAAGTACACTGCTGTACTTGAA
GTACCACGGAAACGCTAGGTACGTTAGTGTAGTGTAGTGTGGTGTGCAGC
ATTTTCTTCGGCGGGTTAGGTCAAACCCTAACCCTAGCTAAGAAAAATGC
CGTAGTGCTTGAAGCACTACGTACACGCTTTCGACGGTGGTGTTGCACGC
ACTGAGCCCTTGCTATGTGCCTGAGCTCAGCTAGATCTTCCTTTAGACGA
TGAGGCAGGCCCTGGTACTGGGAAGTGCCATTGTATGTGCTGTAGCAGGG
TATGCACGCCAAGTACACTGCGGGAGGTACTGTATGTACATATGTATTAG
AGCCGGTGCTTCATGGTGCTGCGCATGTGTGTACCTGTAACACGAGGTGA
AACTTCATGAAGTTTCCTGTTTTCTTTTTTGCCATCCCTGTTACTCTACG
CCCTTGGGCGTTGGCTATCAGCGCAGAGGCTGGATGGGTATTGGAGGAGA
GCGTACTTTTTTTTTCACATAAAATAAAAAGTTACATTAAAATTACAAGA
TTAAATATTTTTCAAAAACCAGGAAATTTCAGGGAATTTTATCTTTATCA
AAATTGATATAATTTCAGAAAAAAAAAAAAAAGGATTTTTTTCCTGATAA
TTTTAAGTCACAAATAAAAATGTTTGTGTGAAATTTTCTCGTAGTCCTGG
ACTGGACTCTGTTCTCCCGCTGTATGGACATGACAAGGAATGGGCGAGAT
GGCACCATCCCCCCTTCAGTTCCTTAAGTTGGCGCCTGGACAAATTGACT
AAGCGGTGTGGCCTGTGTCCAGAACAAGCTCAATGGACTGAACCCTAGTG
CTAACCAAAATTTGTGAGCAGGCAGGTCAAAATTGAACTTATCTAATAGG
CATCTGATTACAACGGGTCTCCTATTATCAATGGGTCTGATCAAGTCCAG
GTGACAAAGAGCTGGGCACAGGGGAACACGGTCCTGATTGGGGACGCCTG
CCACCCCATGATGCCCAACCTAGGGCAGGGGGGCTGCCAGGCAATGGAGG
ACGGCTTTGTGCTGACCAACCTCCTCAAAGGGGTGAGTGAGAAAGAATCC
TGTTTTCTACAAAGCATGAAGTAGTCTTTTTTTTCTATTTTTTGTCTTTC
CCTTCTGTTCAGAATGTCTTTATTATTTTGTTTTGTGCGTGCAGTCATTC
TGTTTTGTATCCATTCCAGATCTTTGGAGCTGGCCTGACTTCTGTTTACT
GTGCAGCATATTATTATGAGGTAGAAACACAAGCTGTTTGGGCCATCATC
CTTTTTGTCATAGCACCTGTGCAATACAGTTGTCATTTTTTTGTGGAACA
AGAACCAGGATGTGGTAGCATGATCCCCTTTTGTTGTTTTTGTGCAGTAC
TCACCCCCAGGAACACACCCATATTTTATTTTTGAAAAAACAAAACACTC
ACTACCAAGATAAGACCTAAGACAGTAAAGCAAACCCTGGCTTCAGCGGG
ATTTTGTTTATTTTTATCCCACACCCTGCCCCCTAGACCCCTTGGGAAAA
AAAATGATTTACGCACCCCATTACATAACTGCAGTGCTTTTTCAGTATTG
TTTCAGTGCTTCGATTCCTTGCCAACTGTCCCCAACTTCAGTTTGTACTG
TGTTTATGGTTCCTTGTCACCTAGGTACAGGTAGGCCTCTGTCTTGTGAC
ACAACCGGTGCCATAAACTTTTAGCCATACGAGGAAGCTATGGTACAGAT
TTAGATGTGTACTTGTATGTTATATCGCCCTTTGTTTGGTATTCTGCCAT
GCCATGCGATGGAGTTCGTAAGGGCCTTCACGGCAACAAGACGGCTAATC
AGACTGGTGCAGTGACTGGCCCTTAGTCAAGACATGACATGACCATGTTG
TGGCCACTGTTTCTTTTTCCCATTTTTCCTCACCAGGTCACCAGTCGCTC
AGAGATCCCATCAACCCTTCAGGGCTTCTACCGTTCCCGTGTCATGAGGA
CGTCCATCATCCAGGGCCTAAGCCGCATTGCAAGTGACCTCATCGTCCAG
CAGTTCGACACCCCCATGAAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10215:610..2730+

>mRNA_D-mesarthrocarpus_Contig10215.3.1 ID=mRNA_D-mesarthrocarpus_Contig10215.3.1|Name=mRNA_D-mesarthrocarpus_Contig10215.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=303bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10215:610..2730+ (Discosporangium mesarthrocarpum MT17_79)
GTTGAGCAGAGGGACCTCTACGACAGGCCTCCGTCGGTGACAAAGAGCTG
GGCACAGGGGAACACGGTCCTGATTGGGGACGCCTGCCACCCCATGATGC
CCAACCTAGGGCAGGGGGGCTGCCAGGCAATGGAGGACGGCTTTGTGCTG
ACCAACCTCCTCAAAGGGGTCACCAGTCGCTCAGAGATCCCATCAACCCT
TCAGGGCTTCTACCGTTCCCGTGTCATGAGGACGTCCATCATCCAGGGCC
TAAGCCGCATTGCAAGTGACCTCATCGTCCAGCAGTTCGACACCCCCATG
AAG
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