mRNA_D-mesarthrocarpus_Contig10204.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10204.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10204.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10204.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10204contigD-mesarthrocarpus_Contig10204:756..1755 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size267
Hectar predicted targeting categoryother localisation
Exons2
Cds size267
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789164.1612937-CDS-D-mesarthrocarpus_Contig10204:755..8931680789164.1612937-CDS-D-mesarthrocarpus_Contig10204:755..893Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10204 756..893 +
1680789164.22162-CDS-D-mesarthrocarpus_Contig10204:1626..17551680789164.22162-CDS-D-mesarthrocarpus_Contig10204:1626..1755Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10204 1627..1755 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10204.1.1prot_D-mesarthrocarpus_Contig10204.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10204 756..1755 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10204.1.1

>prot_D-mesarthrocarpus_Contig10204.1.1 ID=prot_D-mesarthrocarpus_Contig10204.1.1|Name=mRNA_D-mesarthrocarpus_Contig10204.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=89bp
PRDRDGGGGRGRERGKGGARKQPPKLRRGIVRHVDPTVLLPPSFWEVLGV
DICNNTSVDKYSLQLPAVRPTRLFLVDQPTALRFQRTPR
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mRNA from alignment at D-mesarthrocarpus_Contig10204:756..1755+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10204.1.1 ID=mRNA_D-mesarthrocarpus_Contig10204.1.1|Name=mRNA_D-mesarthrocarpus_Contig10204.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1000bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10204:756..1755+ (Discosporangium mesarthrocarpum MT17_79)
CCCCGAGACAGGGACGGCGGCGGGGGCAGGGGCAGGGAAAGGGGCAAGGG
CGGCGCAAGGAAGCAGCCACCAAAGCTGAGGAGGGGGATCGTCCGCCACG
TTGATCCAACCGTCTTGTTGCCACCGAGTTTTTGGGAGGTGAGACGCGGG
AGCGGTGAGGGGAGGGGAGGGGAGGGGAGGGGAAGGGAGGGGGTTCTCGG
AGGGCCGGGAGCGCGGTGAGATGGGTGAGGAGTCTAGCTGGTTTTGCTCA
CTTGATGTTTGTCTCAGCGGCGAGAGGGGCTGCGACTGACCCGTGAGGGC
CAGGCTGCGGGGCAATGAATGAACACAACTTGCTGAGCGTGGACTTGAAC
TTGAAGTAAGAGGGGGTGATCTTGTACAAAATGAAGAGTGGGATAATCCC
CAGGGTCACCGAAATCATGAGAGGAGATGGGACCCCTGGTGTACTGTGCT
CGGTGTGTAATGCCTAGTGACCTTGTGTTGTGAGCATTCACTGTACTTTT
AGGGTACAGGGGAGCACCAGTAGTGTGTTGGCGACACCCATCTATTGGAG
TAGGACACTGAGGTGCTTTGCAGGCCTAACTATACATACATATTAAGCAA
GAAGTAACACCTTTTTTTTGTGCCCCCTTAACCTCACCCCCACAATAGAA
GGAAGTCACTAGCCCTAATGCTGACCATTACCCTACCCTAACCTCACCAG
CCAATCAACAAGGCGATGAGTACCTCAACCAAGGATAGGGGCCTAACCAT
GACCCGAACCCTGATCCCCTTAAAAAAAACCCAGGGTGTCTCCAACTCTA
GCCCTAACTCTACCCCCTCCCCCTCCTCCCCCCGCGGCCCTAACAAAAAA
AAAAAAAAAACTTCGCCAAAGGTCCTGGGCGTCGACATTTGCAATAACAC
CTCCGTGGACAAGTATAGTCTCCAACTCCCCGCCGTCCGGCCGACCCGGC
TATTCCTGGTGGACCAACCCACTGCCCTGCGCTTTCAGAGGACTCCTAGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10204:756..1755+

>mRNA_D-mesarthrocarpus_Contig10204.1.1 ID=mRNA_D-mesarthrocarpus_Contig10204.1.1|Name=mRNA_D-mesarthrocarpus_Contig10204.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=267bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10204:756..1755+ (Discosporangium mesarthrocarpum MT17_79)
CCCCGAGACAGGGACGGCGGCGGGGGCAGGGGCAGGGAAAGGGGCAAGGG
CGGCGCAAGGAAGCAGCCACCAAAGCTGAGGAGGGGGATCGTCCGCCACG
TTGATCCAACCGTCTTGTTGCCACCGAGTTTTTGGGAGGTCCTGGGCGTC
GACATTTGCAATAACACCTCCGTGGACAAGTATAGTCTCCAACTCCCCGC
CGTCCGGCCGACCCGGCTATTCCTGGTGGACCAACCCACTGCCCTGCGCT
TTCAGAGGACTCCTAGG
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