mRNA_D-mesarthrocarpus_Contig10202.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10202.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10202.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10202.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10202contigD-mesarthrocarpus_Contig10202:1696..2844 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size383
Hectar predicted targeting categoryother localisation
Exons2
Cds size381
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789164.0528243-CDS-D-mesarthrocarpus_Contig10202:1695..17391680789164.0528243-CDS-D-mesarthrocarpus_Contig10202:1695..1739Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10202 1696..1739 +
1680789164.0675995-CDS-D-mesarthrocarpus_Contig10202:2505..28421680789164.0675995-CDS-D-mesarthrocarpus_Contig10202:2505..2842Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10202 2506..2842 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10202.2.1prot_D-mesarthrocarpus_Contig10202.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10202 1696..2842 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10202.2.1

>prot_D-mesarthrocarpus_Contig10202.2.1 ID=prot_D-mesarthrocarpus_Contig10202.2.1|Name=mRNA_D-mesarthrocarpus_Contig10202.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=127bp
GQGGGGSSGSTSGAGSGSGAGSMRAAETGGMGSRARARASLGRARLGMGL
RAGVGALASSRQRSDLMRAEERAGGGAGARAAALRERSHLRGKGGYLSED
SGASEEGWMVEDSGEDDEDDVGTGHGG
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mRNA from alignment at D-mesarthrocarpus_Contig10202:1696..2844+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10202.2.1 ID=mRNA_D-mesarthrocarpus_Contig10202.2.1|Name=mRNA_D-mesarthrocarpus_Contig10202.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1149bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10202:1696..2844+ (Discosporangium mesarthrocarpum MT17_79)
GGGCAGGGGGGTGGGGGGTCTTCTGGGAGCACCTCTGGTGCAGGGTAAGT
AAGAGATTCTGAGTTAAGGCAAACGGGTGTGTAGACTGTAATGTTTTACT
GGTTTTGGTGTTATAGGGTGTGGAGGCGATTTGAGAGGAGCATGTTGTTG
GCTTGATCCCCATTGTTTTAAGCGTTTCAGTGACAAACTACTTCCAAGCA
CAGGCTACCACTACTTCAGAGTGCACGGTAGAGCTTCACCCGCTCCTCAC
TTTTTTTTTTGATTTGGATGTTTGTTTTTTTTATGACCTTTTTGGTCCTT
CGCTGGTCTTTTTTTTTTTTGTGGGTCTTTTTCCTTCACTTCGTACTGCT
CAGTATATTGTTTGCTCTGTTAGACTCACAAGCCTGTTCCCCACAGATCA
GTAAGATAGAGTAAGCTGAGTGCTGGCCAGAACATTAGTGTGCTTGCGTG
TGCCAACACACTGGATGACACTTGGATGAAGTAAGACGCAGCATTGAAAC
TCTCTTGGCTGTGACCGCATGCTGTAATTGTATCATTTGACAAGGATGGA
ACAAAGATCTCTTGTAAGAGTGGGGTACTCAGAGTGCACCGCAGTAGTTA
GAAGTAATCAAACACTGTAAGTATGGGTTTAAGATGCATGTTGTAAATAC
AGATTTCAGAGTGGTATCTCCTGGAGTGCTTAGAAGTATTCGATTTGAAT
AGACTGGCCAGACATATCCGCAATTTTTCCTATCCAACACCTAAACCGGA
TTCCTTCATTTTACTGCAACTGAAAAATTGTAACTGTAAACTGTGACCGT
ACGCCGACAGAAGCGGCTCCGGAGCAGGATCGATGAGGGCTGCAGAGACT
GGAGGAATGGGCTCCAGGGCCAGGGCACGAGCATCCTTAGGACGGGCGAG
GTTAGGGATGGGCTTGAGGGCAGGGGTGGGGGCCCTAGCTTCCTCCCGCC
AAAGAAGTGATTTGATGAGGGCTGAGGAACGGGCAGGTGGAGGGGCTGGG
GCAAGGGCTGCAGCATTGAGAGAGAGGTCACATCTGCGGGGGAAGGGGGG
CTACCTCTCAGAAGATTCAGGAGCCAGTGAGGAAGGGTGGATGGTGGAAG
ACAGTGGGGAGGACGATGAGGATGACGTGGGCACTGGGCATGGGGGAGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10202:1696..2844+

>mRNA_D-mesarthrocarpus_Contig10202.2.1 ID=mRNA_D-mesarthrocarpus_Contig10202.2.1|Name=mRNA_D-mesarthrocarpus_Contig10202.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=381bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10202:1696..2844+ (Discosporangium mesarthrocarpum MT17_79)
GGGCAGGGGGGTGGGGGGTCTTCTGGGAGCACCTCTGGTGCAGGAAGCGG
CTCCGGAGCAGGATCGATGAGGGCTGCAGAGACTGGAGGAATGGGCTCCA
GGGCCAGGGCACGAGCATCCTTAGGACGGGCGAGGTTAGGGATGGGCTTG
AGGGCAGGGGTGGGGGCCCTAGCTTCCTCCCGCCAAAGAAGTGATTTGAT
GAGGGCTGAGGAACGGGCAGGTGGAGGGGCTGGGGCAAGGGCTGCAGCAT
TGAGAGAGAGGTCACATCTGCGGGGGAAGGGGGGCTACCTCTCAGAAGAT
TCAGGAGCCAGTGAGGAAGGGTGGATGGTGGAAGACAGTGGGGAGGACGA
TGAGGATGACGTGGGCACTGGGCATGGGGGA
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