mRNA_D-mesarthrocarpus_Contig1020.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1020.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig1020.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1020.4.1 vs. uniprot
Match: D7FKM8_ECTSI (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKM8_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 3.380e-46
Identity = 92/185 (49.73%), Postives = 120/185 (64.86%), Query Frame = 3
Query:    3 VININVSRLVDISTQMARVKTTYNVNGVGQTYSFGLPAGSHDHLAFLSATVNSGNVDPER---RPEEDAGG--LAMY--AVDTRGGGDKVEVVVLAVYTDVLEPFPKEITQLEDQMVVYRGKLLVGSPYLTTSQKTTVRLASTKVAEFTEVPGLSSVKGDKVFYGPFKDVQPLDEGGDLRIHYVS 536
            V+N  V R +D+STQ A+V TTY V G   +Y F LPA + DHLAF+S T++   ++ E     P  D+ G  L +Y  AV+     ++V++ V AVYTDVL  FPKEITQLE+Q VV+   LL  SPY T  Q TT++LAS K+   TE P   SVK D+V YGPF+DV P  +GG+LRIHYV+
Sbjct:   28 VVNTQVQRKIDVSTQFAKVVTTYTVKGTSGSYKFALPADAQDHLAFMSVTMDKAELEFELDAPSPGRDSAGEGLVLYSAAVERPQDKEEVKIAVKAVYTDVLTAFPKEITQLEEQSVVFASTLLAPSPYKTVKQTTTLKLASPKILSMTEAPSKRSVKSDQVTYGPFEDVPPFADGGELRIHYVN 212          
BLAST of mRNA_D-mesarthrocarpus_Contig1020.4.1 vs. uniprot
Match: A0A6H5JJT4_9PHAE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJT4_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.450e-44
Identity = 92/191 (48.17%), Postives = 119/191 (62.30%), Query Frame = 3
Query:    3 VININVSRLVDISTQMARVKTTYNVNGVGQTYSFGLPAGSHDHLAFLSATVNSGNVDPER---RPEEDAGG--LAMY--AVDTRGGGDKVEVVV------LAVYTDVLEPFPKEITQLEDQMVVYRGKLLVGSPYLTTSQKTTVRLASTKVAEFTEVPGLSSVKGDKVFYGPFKDVQPLDEGGDLRIHYVS 536
            V+N  V R +D+STQ A+V TTY V G   +Y F LPA + DHLAF+S T++   ++ E     P  D+ G  L +Y  AV+     ++V++ V       AVYTDVL  FPKEITQLE+Q VV+   LL  SPY T  Q TT++LAS K+   TE P   SVK D+V YGPF+DV P   GG+LRIHYV+
Sbjct:   31 VVNTQVQRKIDVSTQFAKVVTTYTVKGTSGSYKFALPADAQDHLAFMSVTMDKAELEFELDAPSPGRDSAGEGLMLYSAAVELPQNKEEVKIAVGAVVRVKAVYTDVLTAFPKEITQLEEQSVVFASTLLAPSPYKTVKQTTTLKLASPKILSMTEAPNKRSVKSDQVTYGPFEDVPPFANGGELRIHYVN 221          
BLAST of mRNA_D-mesarthrocarpus_Contig1020.4.1 vs. uniprot
Match: A0A836CNP5_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNP5_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.520e-20
Identity = 71/186 (38.17%), Postives = 94/186 (50.54%), Query Frame = 3
Query:    9 NINVSRLVDISTQMARVKTTYNVNGVGQTYSFGLPAGSHDHLAFLSATVNSGNVDPERRPEE----DAGGLAMYAVDTRGGGDKVEVVVLAVYTDVLEPFPKEITQLEDQMVVYRGKLLVGSPYLTTSQKTTVRLASTKVAEFTEVPGLSSVKGDKVFYGPFKDVQPLDE--GGDLRIHYVSLLRG 548
            N +++R +D S  + +V+T YNV G G +Y F +P   H  LA +   VN GN    R  E+     +  +A+    T GG  KVE V  AVYTDVLEP PKEI Q E Q + Y     V SPY T S+ T V LA     E+        V    V YGP+ D+ P D   GG  R+ + + + G
Sbjct:   27 NASIARKIDASKNVVQVRTIYNVRGAGSSYQFLIPEQLHARLAHMEVLVN-GNYAAFRAGEQLEHFASYDVALGGKATAGGTVKVETV--AVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDVLLAEQSPREYHTGVTPWRVLQKTVAYGPYTDLTPEDTMAGGFSRVDHKAQMLG 209          
BLAST of mRNA_D-mesarthrocarpus_Contig1020.4.1 vs. uniprot
Match: A0A1Y1ILT8_KLENI (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ILT8_KLENI)

HSP 1 Score: 97.8 bits (242), Expect = 2.180e-19
Identity = 66/189 (34.92%), Postives = 98/189 (51.85%), Query Frame = 3
Query:    3 VININVSRLVDISTQMARVKTTYNVNGVGQT----YSFGLPAGSHDHLAFLSATVNSGNVDPERRPEEDAG------GLAMYAVD-TR--GGGDKVEVVVLAVYTDVLEPFPKEITQLEDQMVVYRGKLLVGSPYLTTSQKTTVRLASTKVAEFTEVPGLSSVKGDKVFYGPFKDVQPLDEGGDLRIHY 530
            ++N  V R +D++TQ  R+ +T      G T    Y   L      HLAF+ AT   G        E  AG       L++Y V  TR  GGG+   + V++V+T    P+P EITQ E+Q+V+Y G L + SPY T S+ + V L ++ V  +T+   +    G ++ YGP+ DV PL    +LRIH+
Sbjct:   31 IVNTRVDRKLDLATQTVRISSTIKFENRGSTPVRSYLLALAPSEAAHLAFIGATQGKGRSQTTLAVEAVAGIPGVPSSLSLYEVALTRPVGGGESATLEVVSVHTGAEVPYPAEITQSEEQLVLYTGSLHLVSPYATASESSKVGLPTSLVKAYTKAEPVKK-SGTEITYGPYSDVAPLSVE-ELRIHF 217          
BLAST of mRNA_D-mesarthrocarpus_Contig1020.4.1 vs. uniprot
Match: A0A6P4ZBS4_BRABE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZBS4_BRABE)

HSP 1 Score: 92.0 bits (227), Expect = 2.050e-17
Identity = 58/185 (31.35%), Postives = 94/185 (50.81%), Query Frame = 3
Query:    6 ININVSRLVDISTQMARVKTTYNVNGVGQT----YSFGLPAGSHDHLAFLSATVNSGNVDPERRPEEDAGGLA---MYAVD---TRGGGDKVEVVVLAVYTDVLEPFPKEITQLEDQMVVYRGKLLVGSPYLTTSQKTTVRLASTKVAEFTEVPGLSSVKGDKVFYGPFKDVQPLDEGGDLRIHY 530
            +N  V+R +D+++Q+A+  TT  +   G+T    +   +     D L+F+ AT      +     +    G     ++ VD     G G    V V   YT    P+P +ITQ EDQ+V+++G L   SPY T S+ TTV+LAS K+   T+    + V+   + YGPF++V+   +   L+IHY
Sbjct:   31 VNSAVNRQIDLTSQLAKFTTTITLENAGKTATTSFVLAIDPSLRDRLSFIGATTKDDEAEKLSVTQTTVPGRTTDVLFRVDLPKALGAGQSTTVNVEEAYTHAQTPYPAQITQAEDQLVLFKGNLHFYSPYKTQSETTTVKLASNKIESHTKTK--AKVEDSSIVYGPFENVEAFSQE-KLQIHY 212          
BLAST of mRNA_D-mesarthrocarpus_Contig1020.4.1 vs. uniprot
Match: K3W6J7_GLOUD (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6J7_GLOUD)

HSP 1 Score: 90.9 bits (224), Expect = 3.770e-17
Identity = 64/191 (33.51%), Postives = 99/191 (51.83%), Query Frame = 3
Query:    3 VININVSRLVDISTQMARVKTTYNVNGVGQT---YSFGLPAGSHDHLAFLSA--------TVNSGNVDPERRPEEDAGGLAMYAVDTRGG---GDKVEVVVLAVYTDVLEPFPKEITQLEDQMVVYRGKLLVGSPYLTTSQKTTVRLASTKVAEFTEVPGLSSVKGDKVFYGPFKDVQPLD-EGGDLRIHY 530
            VIN +V R++D++  + RV+T        Q    Y FGLP     HL+ L A         V + +VD    P      +A Y V  +     G+   V + + +T VL PFP+EITQ E+Q+VVY    L+ SPY T +Q T V+L S +V  F+++  ++  KG  + YGP+ + +P   +   LR+H+
Sbjct:   17 VINTSVKRVLDLTKHVVRVQTDIQFVDAEQDTKEYVFGLPKDKAKHLSQLVAKCGKNPCEVVPATHVDANAHPN-----VAQYTVVLKNKVAKGETGHVKLTSYFTRVLTPFPEEITQKEEQLVVYEDSHLLLSPYTTETQTTKVKLPSGRVESFSQIQPVTR-KGAMISYGPYTNAEPFSSDAKSLRVHF 201          
BLAST of mRNA_D-mesarthrocarpus_Contig1020.4.1 vs. uniprot
Match: A0A2G8K8N3_STIJA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8K8N3_STIJA)

HSP 1 Score: 90.5 bits (223), Expect = 6.480e-17
Identity = 63/194 (32.47%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ININVSRLVDISTQMARVKTTYNVNGVGQT----YSFGLPAGSHDHLAFLSATVNSGNVDPERRPEEDAGGLAMYAVDTRG---------------GGDKVEVVVLAVYTDVLEPFPKEITQLEDQMVVYRGKLLVGSPYLTTSQKTTVRLASTKVAEFTEVPGLSSVKGDKVFYGPFKDVQPLDEGGDLRIHY 530
            +N  V R VDIS+Q+ ++ T+  V   G +    Y FGL     D LAF  A+            EED+  +++  V   G                G   ++    VY   L P+P +ITQ E Q+V + G +LV SPY +TSQ TTV+LAS+++   T+V  +S V+ D + YGP++D +   +    +IH+
Sbjct:   31 VNKKVERKVDISSQLVQISTSVTVENTGSSAADSYVFGLDPVMEDTLAFAGASQTEDE-------EEDSEKVSLAPVKITGQSGSFFEIKFQEPLKAGSSADIKFEEVYIKALRPYPAQITQSEKQLVEFFGSVLVYSPYKSTSQTTTVKLASSEIESHTKVNPVS-VEDDTITYGPYEDKEAFSKE-QAKIHF 215          
BLAST of mRNA_D-mesarthrocarpus_Contig1020.4.1 vs. uniprot
Match: A0A8K1FFD1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFD1_PYTOL)

HSP 1 Score: 90.1 bits (222), Expect = 6.960e-17
Identity = 58/184 (31.52%), Postives = 98/184 (53.26%), Query Frame = 3
Query:    3 VININVSRLVDISTQMARVKTTY---NVNGVGQTYSFGLPAGSHDHLAFLSATVNSGNVDPERRPEEDAGGLA-MYAVDTRGG---GDKVEVVVLAVYTDVLEPFPKEITQLEDQMVVYRGKLLVGSPYLTTSQKTTVRLASTKVAEFTEVPGLSSVKGDKVFYGPFKDVQP-LDEGGDLRIHY 530
            VIN +V R+VD++  + R+++     +       YSF L     + LA ++A       +  +  E     L  +Y V  +     G+   + + A +T VL+PFP+EITQ EDQ+VV+    L  SPYLT +Q T V+L S ++  ++ +  ++  KG  + YGP+++V+P +     LR+HY
Sbjct:   20 VINTSVKRVVDLTKHVVRIQSDIQFVDAEDATNEYSFALSKSMGERLAHVTAKCGKNACEVVKSAESAESSLVDLYTVVLQNSVPKGETGHIKLNAHFTRVLKPFPEEITQKEDQLVVFEDGHLFASPYLTETQTTKVKLPSGRIESYSNIQPVTQ-KGATITYGPYENVEPFVAPSNSLRVHY 202          
BLAST of mRNA_D-mesarthrocarpus_Contig1020.4.1 vs. uniprot
Match: A0A2D4BXN7_PYTIN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXN7_PYTIN)

HSP 1 Score: 87.0 bits (214), Expect = 8.140e-16
Identity = 57/185 (30.81%), Postives = 99/185 (53.51%), Query Frame = 3
Query:    3 VININVSRLVDISTQMARVKTTYN-VNGVGQT--YSFGLPAGSHDHLAFLSATVNS-----GNVDPERRPEEDAGGLAMYAVDTRGGGDKVEVVVLAVYTDVLEPFPKEITQLEDQMVVYRGKLLVGSPYLTTSQKTTVRLASTKVAEFTEVPGLSSVKGDKVFYGPFKDVQP-LDEGGDLRIHY 530
            +IN +V RLVD++  + R+++    VN    T  Y F L     + LAF+SA            D +   + D G  ++   D+   G+   V + + +T VL PFP E+ Q ++Q+VV+    ++ SPYLT +Q T V+L S ++  +++V  ++  KG  V YGP+++ +P +     LR+H+
Sbjct:   21 IINTSVKRLVDLTKHVVRIQSDIQFVNDDADTSVYEFALSKRMSERLAFVSAKCGKIACEVVKADHDHGDDSDVGLYSVVLQDSVPKGETGHVKLTSYFTRVLTPFPAEVAQTDEQLVVFEDTHVMPSPYLTRTQTTKVKLPSGRIESYSDVAPVTH-KGSVVTYGPYENAEPFVAPRNALRVHF 204          
BLAST of mRNA_D-mesarthrocarpus_Contig1020.4.1 vs. uniprot
Match: A0A5D6Y1C5_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1C5_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.310e-15
Identity = 63/186 (33.87%), Postives = 98/186 (52.69%), Query Frame = 3
Query:    6 ININVSRLVDISTQMARVKTTYN-VNGVGQT--YSFGLPAGSHDHLAFLSATVNSGNVDPERRPEEDAGG---LAMYAV---DTRGGGDKVEVVVLAVYTDVLEPFPKEITQLEDQMVVYRGKLLVGSPYLTTSQKTTVRLASTKVAEFTEVPGLSSVKGDKVFYGPFKDVQPL--DEGGDLRIHY 530
            IN +V R++D++  + R +T    V+   +T  Y FG+P      +A L+A       +       DAG    +A + V   D+   G    V + A  T VL PFP EITQ E+Q+VV+    ++ SPY T +Q T V+L S +V  F++V  ++  KG  + YGP+ +V+P    EG  LR+H+
Sbjct:   29 INTSVKRVLDLTKHVVRTQTDVQFVDAAQETREYVFGIPQAQAARVAQLTAKCGKTPCEVVPATHADAGAHPNVAQFTVVFKDSVAKGAVGHVKLTAHLTRVLTPFPAEITQKEEQLVVFEDSAVLLSPYATETQTTKVKLPSGRVESFSDVAPVTR-KGATISYGPYANVEPFAAGEGTALRVHF 213          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1020.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKM8_ECTSI3.380e-4649.73Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A6H5JJT4_9PHAE1.450e-4448.17Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A836CNP5_9STRA2.520e-2038.17Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A1Y1ILT8_KLENI2.180e-1934.92Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A6P4ZBS4_BRABE2.050e-1731.35Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
K3W6J7_GLOUD3.770e-1733.51Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A2G8K8N3_STIJA6.480e-1732.47Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A8K1FFD1_PYTOL6.960e-1731.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BXN7_PYTIN8.140e-1630.81Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A5D6Y1C5_9STRA2.310e-1533.87Dolichyl-diphosphooligosaccharide--protein glycosy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1020contigD-mesarthrocarpus_Contig1020:20801..24862 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKM8
Preferred nameRPN1
PFAMsRibophorin_I
Model size808
Max annot lvl2759|Eukaryota
KEGG koko:K12666
KEGG Pathwayko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141
KEGG ModuleM00072
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004576,GO:0004579,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005886,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0008250,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009505,GO:0009987,GO:0012505,GO:0015833,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0030312,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032991,GO:0034645,GO:0036211,GO:0042175,GO:0042470,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048770,GO:0051179,GO:0051234,GO:0070085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990234
Exons4
Evalue1.37e-42
EggNOG OGsKOG2291@1|root,KOG2291@2759|Eukaryota
Descriptiondolichyl-diphosphooligosaccharide-protein glycotransferase activity
Cds size510
COG categoryM
BRITEko00000,ko00001,ko00002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1020.4.1prot_D-mesarthrocarpus_Contig1020.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1020 20848..24611 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789163.931457-UTR-D-mesarthrocarpus_Contig1020:20800..208471680789163.931457-UTR-D-mesarthrocarpus_Contig1020:20800..20847Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1020 20801..20847 +
1680789164.0127006-UTR-D-mesarthrocarpus_Contig1020:24611..248621680789164.0127006-UTR-D-mesarthrocarpus_Contig1020:24611..24862Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1020 24612..24862 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789163.9489157-CDS-D-mesarthrocarpus_Contig1020:20847..208561680789163.9489157-CDS-D-mesarthrocarpus_Contig1020:20847..20856Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1020 20848..20856 +
1680789163.9630842-CDS-D-mesarthrocarpus_Contig1020:21522..217261680789163.9630842-CDS-D-mesarthrocarpus_Contig1020:21522..21726Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1020 21523..21726 +
1680789163.9773452-CDS-D-mesarthrocarpus_Contig1020:22835..229881680789163.9773452-CDS-D-mesarthrocarpus_Contig1020:22835..22988Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1020 22836..22988 +
1680789163.995179-CDS-D-mesarthrocarpus_Contig1020:24467..246111680789163.995179-CDS-D-mesarthrocarpus_Contig1020:24467..24611Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1020 24468..24611 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1020.4.1

>prot_D-mesarthrocarpus_Contig1020.4.1 ID=prot_D-mesarthrocarpus_Contig1020.4.1|Name=mRNA_D-mesarthrocarpus_Contig1020.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=170bp
MARVKTTYNVNGVGQTYSFGLPAGSHDHLAFLSATVNSGNVDPERRPEED
AGGLAMYAVDTRGGGDKVEVVVLAVYTDVLEPFPKEITQLEDQMVVYRGK
LLVGSPYLTTSQKTTVRLASTKVAEFTEVPGLSSVKGDKVFYGPFKDVQP
LDEGGDLRIHYVSLLRGFA*
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mRNA from alignment at D-mesarthrocarpus_Contig1020:20801..24862+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1020.4.1 ID=mRNA_D-mesarthrocarpus_Contig1020.4.1|Name=mRNA_D-mesarthrocarpus_Contig1020.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4062bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1020:20801..24862+ (Discosporangium mesarthrocarpum MT17_79)
ATGTGATCAACATCAACGTCTCCAGGCTCGTGGACATCTCGACACAGATG GCCAGGGTATGGAATCAATTAATTTAATCACTGCAACTCTTAATAGCTTT GGAAAGCGGTTCGGCGGTAGAGGGTGTCGCAAGGAACGGGATAGTGAGAG GTTCTGGCAACTTTTGGAGGCAGCTTATCGGTTCTGTATCCACTCCAGAT TGGCAGCGGTGATTTCGGTCTTGCAAGGAGAGACTGCCTAGTAGTAGAAT CTTTTGTCGAGAATTAGGGAGACCTTCCCCATCTATCCTCTGGATTTGTT GGGAAAGCTTTTGCTCTAGATTCAAGAGAGTCCTGTTCACGATCCATTGA TGACATCGTCGTGCCGACATACCTGCGAGGCATATGCCGAAGGCCTTTCT CCAGGCCCAAAGAGGACCCGAGGAAAATCCGGGCCTTGGTGCAACGACAT CATCGAATTCTGATCCGTGGTGTTCCCAAGGAAGAGGATGAACCCTCTGA TCCAGATACCCTCTATACCCTAACCAGGATTCTACCTCTGAAGTTAGACG TTAAAAGCGAAACCAAGCACCCGCTTGATGCGAAATGAGCCTTCGAAGAC ACGACGGCAACGTCGCTAGTAGGGCCTCAACAACAAGAATGCTTTCCCCG ACCGCGTGTAGATATCGACGCGTCCACCGTATCCCTTATCCGCGCTTCCT CTGTCTTTTGCCTTTTTACCAGGTCAAGACTACGTACAACGTGAACGGGG TTGGACAGACATATTCTTTTGGTCTTCCCGCCGGCAGTCACGACCACCTG GCCTTTTTGAGCGCCACGGTCAACTCAGGGAATGTCGATCCTGAGAGACG GCCAGAGGAGGATGCAGGGGGCTTGGCCATGTACGCGGTGGACACGAGGG GAGGCGGGGACAAAGTCGAGGTGGTGGTGAGTTTGTTTTTCTTTGTGGAG ACCAGTGAATCACTCCCTCGCAGATGCCGAGAGTAACTATGTTGTGGTGG GAAACCATAAAAAAATAGCCTGAAAAACATTCTGTTGCTTGGAATCACGA GGTTTGCTCAACGAAAGTGTTGGCTACTTTATTGTTCCCCACGGAATGGG GCGGAAGGTGGTGCTTGTGCCTGAGAATGATGTTGGGTTCTGCATGCCCC AGCGGGCAAGGGCAGTAGGAGTGAGCTTCTTGAACTATTTTTGGTCGTTT GAAACACTTGTCTGTGTGGCATGTGGTTTTATTTATTCTCCTCTTTTGAT CGTGTGAGGGTAGAGCACCACCATACACTGTGCCCCAGTCGGTGTGGAGG GAATTGGATGGGTGCGGATGGGGGGGAAGGGTGTGCAAGTAACTACCATA GTTCTTGGCACACATTGTAGCTTACAGTGCTTTTCATACTTTACTGGCAG TAATCCATTTTCCACCGATGACAATCCGCTGTCATGTAATAAACGCTCCT CTATACCGTGAGCCCTAACCCTAACCCTAACCTTAACCCTACCCCTCAGA AATGTTCTGCACCCCTTGCTGAGATCCTCTTTAATGCATACGGCTTTTCC TGACAGGACAGTTAAACTACACAGGCCAGCACCTGCACCTGTTCTCTCTC TCCCGCTTCTGAAAACATAGCACCCGAATTACTCCCTCCAATAGAATTTA CTGGTGCACTAGAAGAGATTGAGAGCTGAGGAAAGACCCAGAGCTCTGCA GAGAAGTCCAGAGCTCTACTGTAGAGGGCTCTGTAGAGCTCTGCCTGTGG GCCCACAAAACCAAAGCCTCAACCCTTAGGAAATGGAGCTCATACACCGG GGGGTTGATAAAAAGGAAATATGTTTGTCTCATATCTCATCCTAGGGGTT TAATTTTTTAACATCCTGTTCTCCATGCCCTAATGCCATGTCATTTTCAT CAATCACTTGCCACACCCATGCGTGTGTTGTTTTGACTGTTGTCCATTTG TGTGGGCGGTGGCTGGTTGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG GTGGTGGGCTCTTACCTGTATGCTGATCGGTGAAGGTTCTCGCGGTGTAT ACTGATGTTCTGGAGCCCTTCCCCAAGGAGATTACCCAGCTGGAGGATCA GATGGTAGTCTATAGGGGGAAGCTTCTCGTGGGCTCCCCCTATCTGACCA CCAGTCAGAAAACCACCGTTAGGCTTGCGAGCACCAAGGTGAGGAACACT TCCTTTTTCGGTGTCCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTGT TTTTGTTCTTGCAGTTGTTGTACACCAAGCACAGTGCCTGCCAGCTGGTG TGTATTTTGGGGCCGGGGCACACGTACATGGACATGGGCATCCATCCCTG CCAAGGTTCGCCTTGGGTGAGCACATGCAGGGAACCATGTACGCACATGC TAACCTGGTCCCAGGTCCAGGTGCCTTGATAGTTAACCCTAGAGGCTATC ATAACCCTGGGAAAGTGTTTGTGCAGCAGGTTGTTACTGTTGAACACCGC ACTGGCTTGTGTGTGTGTGTGTGTGTGTGTGTTTGCGTCTGTTGCAATGT GGCGATAGGTGTGATGATGGACAGGGGACGCACACTATGAAGCAGACCAC TACTGTGCTGTACATGTGGACGGGTTGAAACCTAGAGAGGGAATAATCCC TTGGAGGAGGGTAATATGTTGGCTCAGCACGGCTCGAGGCTCAACTGCAC ACCATGGTTTGACAGAATAGCTGAATGAAGGGCCTCCATGCGCACCCGAA GCAAGCCCATCAGCAGTGATGAGATGGTGATATACTGTGTACACTTATGT CCTCTGTTCAGAATTACCTAGCGGTTGTCACTGGTACGGAATGGTGACAG TTTTGCGGTAATGCTAGGCAGAGGAGATTATGTGCGTACGGCACATTAGC ATACAGCGGTGGTGTTTGTGTCTTGAGTGTGCGAACGGCCTACACGTTAA GAAACGACAACGATGCTGATAAATGCTGTGGATTACTGGTGCCTTGAAGT GCCCTGGATGCTCTACGGATCCAGAAGAGCTACAGAGCCAGTGGCCCACT GGAAGTAGACTGTGCTCTGCGGGCAGACAACAACAAAAAAAGAACAGCCT TTGGGGTATGTTGCTACCAGCTACTGTAACTGGCTTGCTTTTTCCTATAT GAAGTTCTCAGCAGCACTTCAGATTTTACTTCTTCTGAAGTATATTATTA CTACGTGAAGCATGTCACTGCTCTTGAAGCATGTAACTACTTATTGCAGG ATAGTACTCCTACATAGAACACTGTACGTATGTACTGAGTGGATGGCCCC ACCCCAACCCTCTCATTGTCCCCCTTCCTCCCCTCCCTGGGAGCAATGGT CCACAAGAGTAAATATATTAAGGGTAGATAAATCAAGAGTAGATATGTCG GAGTGTGTTTGCTGCTTGTCAGATTATAAATCTTTCTGTACACCAACGAT GGTGATGGTGATAGGGACAGTTGAAGAAGATGATGGTGGTAATGAAGAAG AGGAGCCTGATGATGATGGCAATGGTGGTGGTGATGAACAGAAGCTGTAG CTGATACAGACACTTGATTTCACACTGGCTCTTTCTCCCTCACTCGTACC CTCCTTTCCTCTCTCTCTCCCTCCCTCTTTCTTTGTATAAATATGTGTGT ATTTCTGTCTGCTCCAGGTTGCGGAGTTTACAGAAGTGCCAGGGTTGTCC AGCGTCAAGGGAGACAAGGTATTCTACGGCCCCTTCAAAGATGTCCAGCC CCTGGATGAGGGGGGGGACCTGCGCATCCACTATGTGAGCCTGTTGAGAG GGTTTGCTTAGAGCTGAAGGCAGGGGGAATGGCATAGGGCTGTTAGGTGT AGGGGTTTAGGTTTAATGGGCTATAGGCCCTAGATGATGGGGGAGACATA CGAACATGGCATTTTGAGAGCCTGAGAGGCTTAATGCAGTTAAGGTCTAA GGTAAGGGTTAAATAAAGTTTGAAGGTGTAGGGTTGTAGGGTTAAGGCTT ACCCGATGCAATCCCCCCCCCCCAAAAAAAAACAAAGAAAAAAGCGGGGG GCTTGGCAGAGT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1020:20801..24862+

>mRNA_D-mesarthrocarpus_Contig1020.4.1 ID=mRNA_D-mesarthrocarpus_Contig1020.4.1|Name=mRNA_D-mesarthrocarpus_Contig1020.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=510bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1020:20801..24862+ (Discosporangium mesarthrocarpum MT17_79)
ATGGCCAGGGTCAAGACTACGTACAACGTGAACGGGGTTGGACAGACATA
TTCTTTTGGTCTTCCCGCCGGCAGTCACGACCACCTGGCCTTTTTGAGCG
CCACGGTCAACTCAGGGAATGTCGATCCTGAGAGACGGCCAGAGGAGGAT
GCAGGGGGCTTGGCCATGTACGCGGTGGACACGAGGGGAGGCGGGGACAA
AGTCGAGGTGGTGGTTCTCGCGGTGTATACTGATGTTCTGGAGCCCTTCC
CCAAGGAGATTACCCAGCTGGAGGATCAGATGGTAGTCTATAGGGGGAAG
CTTCTCGTGGGCTCCCCCTATCTGACCACCAGTCAGAAAACCACCGTTAG
GCTTGCGAGCACCAAGGTTGCGGAGTTTACAGAAGTGCCAGGGTTGTCCA
GCGTCAAGGGAGACAAGGTATTCTACGGCCCCTTCAAAGATGTCCAGCCC
CTGGATGAGGGGGGGGACCTGCGCATCCACTATGTGAGCCTGTTGAGAGG
GTTTGCTTAG
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